gene detail

Gene description

TAIR ID: AT2G39550

Short description: Prenyltransferase family protein

Pathogen responsiveness: -2.09

General responsiveness: -2.29

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

protein geranylgeranylation, response to water deprivation, negative regulation of abscisic acid-activated signaling pathway, response to abscisic acid, response to auxin

GO cellular component

nucleus, CAAX-protein geranylgeranyltransferase complex

GO molecular function

metal ion binding, CAAX-protein geranylgeranyltransferase activity, protein heterodimerization activity

Protein domain

Pfam	PF00432, Prenyltransferase and squalene oxidase repeat

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	1.50	2.58E-15