Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G39550

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
2GO:1900367: positive regulation of defense response to insect0.00E+00
3GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response0.00E+00
4GO:0009312: oligosaccharide biosynthetic process0.00E+00
5GO:0002764: immune response-regulating signaling pathway0.00E+00
6GO:0032515: negative regulation of phosphoprotein phosphatase activity0.00E+00
7GO:0046865: terpenoid transport0.00E+00
8GO:0033587: shikimate biosynthetic process0.00E+00
9GO:0032491: detection of molecule of fungal origin0.00E+00
10GO:0010324: membrane invagination0.00E+00
11GO:0009268: response to pH0.00E+00
12GO:0032499: detection of peptidoglycan0.00E+00
13GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
14GO:0071327: cellular response to trehalose stimulus0.00E+00
15GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
16GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
17GO:0009751: response to salicylic acid1.17E-05
18GO:0031348: negative regulation of defense response2.65E-05
19GO:0006468: protein phosphorylation3.80E-05
20GO:0042742: defense response to bacterium5.70E-05
21GO:0033358: UDP-L-arabinose biosynthetic process1.18E-04
22GO:0060548: negative regulation of cell death1.18E-04
23GO:0045227: capsule polysaccharide biosynthetic process1.18E-04
24GO:0006904: vesicle docking involved in exocytosis1.42E-04
25GO:0010200: response to chitin1.54E-04
26GO:0010150: leaf senescence1.61E-04
27GO:0002238: response to molecule of fungal origin2.58E-04
28GO:2000022: regulation of jasmonic acid mediated signaling pathway3.83E-04
29GO:0015969: guanosine tetraphosphate metabolic process4.53E-04
30GO:0006562: proline catabolic process4.53E-04
31GO:1901183: positive regulation of camalexin biosynthetic process4.53E-04
32GO:0019673: GDP-mannose metabolic process4.53E-04
33GO:0042759: long-chain fatty acid biosynthetic process4.53E-04
34GO:0015760: glucose-6-phosphate transport4.53E-04
35GO:0046256: 2,4,6-trinitrotoluene catabolic process4.53E-04
36GO:0019567: arabinose biosynthetic process4.53E-04
37GO:0010204: defense response signaling pathway, resistance gene-independent6.77E-04
38GO:2000031: regulation of salicylic acid mediated signaling pathway6.77E-04
39GO:0006855: drug transmembrane transport7.62E-04
40GO:0010112: regulation of systemic acquired resistance8.12E-04
41GO:0010193: response to ozone8.46E-04
42GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway9.56E-04
43GO:1900426: positive regulation of defense response to bacterium9.56E-04
44GO:0009727: detection of ethylene stimulus9.79E-04
45GO:0010115: regulation of abscisic acid biosynthetic process9.79E-04
46GO:0002240: response to molecule of oomycetes origin9.79E-04
47GO:0043066: negative regulation of apoptotic process9.79E-04
48GO:0044419: interspecies interaction between organisms9.79E-04
49GO:0015865: purine nucleotide transport9.79E-04
50GO:0031349: positive regulation of defense response9.79E-04
51GO:0010271: regulation of chlorophyll catabolic process9.79E-04
52GO:0015712: hexose phosphate transport9.79E-04
53GO:0019725: cellular homeostasis9.79E-04
54GO:0046939: nucleotide phosphorylation9.79E-04
55GO:0010155: regulation of proton transport9.79E-04
56GO:0080151: positive regulation of salicylic acid mediated signaling pathway9.79E-04
57GO:0010133: proline catabolic process to glutamate9.79E-04
58GO:0080185: effector dependent induction by symbiont of host immune response9.79E-04
59GO:0010618: aerenchyma formation9.79E-04
60GO:1902066: regulation of cell wall pectin metabolic process9.79E-04
61GO:0009626: plant-type hypersensitive response1.34E-03
62GO:0015714: phosphoenolpyruvate transport1.59E-03
63GO:0080168: abscisic acid transport1.59E-03
64GO:0048586: regulation of long-day photoperiodism, flowering1.59E-03
65GO:0032922: circadian regulation of gene expression1.59E-03
66GO:0010498: proteasomal protein catabolic process1.59E-03
67GO:0006954: inflammatory response1.59E-03
68GO:0034051: negative regulation of plant-type hypersensitive response1.59E-03
69GO:0016045: detection of bacterium1.59E-03
70GO:1900140: regulation of seedling development1.59E-03
71GO:1901672: positive regulation of systemic acquired resistance1.59E-03
72GO:0010359: regulation of anion channel activity1.59E-03
73GO:0042351: 'de novo' GDP-L-fucose biosynthetic process1.59E-03
74GO:0035436: triose phosphate transmembrane transport1.59E-03
75GO:0045836: positive regulation of meiotic nuclear division1.59E-03
76GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process1.59E-03
77GO:0015692: lead ion transport1.59E-03
78GO:2000028: regulation of photoperiodism, flowering1.67E-03
79GO:0018107: peptidyl-threonine phosphorylation1.67E-03
80GO:0034605: cellular response to heat1.88E-03
81GO:0007034: vacuolar transport1.88E-03
82GO:0009266: response to temperature stimulus1.88E-03
83GO:0009225: nucleotide-sugar metabolic process2.11E-03
84GO:0046902: regulation of mitochondrial membrane permeability2.31E-03
85GO:0006537: glutamate biosynthetic process2.31E-03
86GO:0010104: regulation of ethylene-activated signaling pathway2.31E-03
87GO:0072583: clathrin-dependent endocytosis2.31E-03
88GO:0010731: protein glutathionylation2.31E-03
89GO:0071323: cellular response to chitin2.31E-03
90GO:0006986: response to unfolded protein2.31E-03
91GO:0046513: ceramide biosynthetic process2.31E-03
92GO:0046836: glycolipid transport2.31E-03
93GO:0048194: Golgi vesicle budding2.31E-03
94GO:0006952: defense response2.41E-03
95GO:0009867: jasmonic acid mediated signaling pathway2.55E-03
96GO:0009863: salicylic acid mediated signaling pathway2.61E-03
97GO:0046777: protein autophosphorylation2.93E-03
98GO:0071219: cellular response to molecule of bacterial origin3.10E-03
99GO:0010508: positive regulation of autophagy3.10E-03
100GO:0015713: phosphoglycerate transport3.10E-03
101GO:0080142: regulation of salicylic acid biosynthetic process3.10E-03
102GO:0010109: regulation of photosynthesis3.10E-03
103GO:0006887: exocytosis3.18E-03
104GO:0071456: cellular response to hypoxia3.47E-03
105GO:0051707: response to other organism3.53E-03
106GO:0006012: galactose metabolic process3.78E-03
107GO:0009247: glycolipid biosynthetic process3.98E-03
108GO:0045927: positive regulation of growth3.98E-03
109GO:0009697: salicylic acid biosynthetic process3.98E-03
110GO:0034052: positive regulation of plant-type hypersensitive response3.98E-03
111GO:0009435: NAD biosynthetic process3.98E-03
112GO:0010225: response to UV-C3.98E-03
113GO:0006470: protein dephosphorylation4.58E-03
114GO:0009611: response to wounding4.59E-03
115GO:0035556: intracellular signal transduction4.89E-03
116GO:0033365: protein localization to organelle4.92E-03
117GO:0010337: regulation of salicylic acid metabolic process4.92E-03
118GO:0018258: protein O-linked glycosylation via hydroxyproline4.92E-03
119GO:0009643: photosynthetic acclimation4.92E-03
120GO:0010942: positive regulation of cell death4.92E-03
121GO:0010405: arabinogalactan protein metabolic process4.92E-03
122GO:0009737: response to abscisic acid5.06E-03
123GO:0006486: protein glycosylation5.17E-03
124GO:0016567: protein ubiquitination5.19E-03
125GO:0009753: response to jasmonic acid5.84E-03
126GO:0045926: negative regulation of growth5.94E-03
127GO:0009423: chorismate biosynthetic process5.94E-03
128GO:0031930: mitochondria-nucleus signaling pathway5.94E-03
129GO:0010310: regulation of hydrogen peroxide metabolic process5.94E-03
130GO:0071470: cellular response to osmotic stress5.94E-03
131GO:0009749: response to glucose6.00E-03
132GO:0070370: cellular heat acclimation7.03E-03
133GO:1900057: positive regulation of leaf senescence7.03E-03
134GO:0071446: cellular response to salicylic acid stimulus7.03E-03
135GO:1900056: negative regulation of leaf senescence7.03E-03
136GO:0009620: response to fungus7.22E-03
137GO:0009624: response to nematode8.11E-03
138GO:0006970: response to osmotic stress8.14E-03
139GO:0010928: regulation of auxin mediated signaling pathway8.18E-03
140GO:0009787: regulation of abscisic acid-activated signaling pathway8.18E-03
141GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline8.18E-03
142GO:0009819: drought recovery8.18E-03
143GO:0030162: regulation of proteolysis8.18E-03
144GO:0006491: N-glycan processing8.18E-03
145GO:0019375: galactolipid biosynthetic process8.18E-03
146GO:0045010: actin nucleation8.18E-03
147GO:0031540: regulation of anthocyanin biosynthetic process8.18E-03
148GO:0018105: peptidyl-serine phosphorylation8.42E-03
149GO:0001666: response to hypoxia9.33E-03
150GO:0030968: endoplasmic reticulum unfolded protein response9.38E-03
151GO:0010099: regulation of photomorphogenesis9.38E-03
152GO:0009932: cell tip growth9.38E-03
153GO:0009816: defense response to bacterium, incompatible interaction9.87E-03
154GO:0009627: systemic acquired resistance1.04E-02
155GO:0006098: pentose-phosphate shunt1.07E-02
156GO:0006950: response to stress1.10E-02
157GO:0048268: clathrin coat assembly1.20E-02
158GO:0048354: mucilage biosynthetic process involved in seed coat development1.20E-02
159GO:0010380: regulation of chlorophyll biosynthetic process1.20E-02
160GO:0009817: defense response to fungus, incompatible interaction1.22E-02
161GO:0009870: defense response signaling pathway, resistance gene-dependent1.34E-02
162GO:0006032: chitin catabolic process1.34E-02
163GO:0006499: N-terminal protein myristoylation1.35E-02
164GO:0009407: toxin catabolic process1.35E-02
165GO:0019684: photosynthesis, light reaction1.48E-02
166GO:0009089: lysine biosynthetic process via diaminopimelate1.48E-02
167GO:0009073: aromatic amino acid family biosynthetic process1.48E-02
168GO:0045087: innate immune response1.55E-02
169GO:0002213: defense response to insect1.63E-02
170GO:0010105: negative regulation of ethylene-activated signaling pathway1.63E-02
171GO:0000266: mitochondrial fission1.63E-02
172GO:0008361: regulation of cell size1.63E-02
173GO:0006626: protein targeting to mitochondrion1.79E-02
174GO:0055046: microgametogenesis1.79E-02
175GO:0006829: zinc II ion transport1.79E-02
176GO:0009408: response to heat1.82E-02
177GO:0006897: endocytosis1.85E-02
178GO:0007166: cell surface receptor signaling pathway1.93E-02
179GO:0002237: response to molecule of bacterial origin1.95E-02
180GO:0009744: response to sucrose2.00E-02
181GO:0055085: transmembrane transport2.11E-02
182GO:0010167: response to nitrate2.12E-02
183GO:0046854: phosphatidylinositol phosphorylation2.12E-02
184GO:0009636: response to toxic substance2.25E-02
185GO:0034976: response to endoplasmic reticulum stress2.29E-02
186GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process2.43E-02
187GO:0080147: root hair cell development2.46E-02
188GO:2000377: regulation of reactive oxygen species metabolic process2.46E-02
189GO:0006487: protein N-linked glycosylation2.46E-02
190GO:0006812: cation transport2.52E-02
191GO:0007275: multicellular organism development2.59E-02
192GO:0009269: response to desiccation2.82E-02
193GO:0051321: meiotic cell cycle2.82E-02
194GO:0016998: cell wall macromolecule catabolic process2.82E-02
195GO:0010017: red or far-red light signaling pathway3.01E-02
196GO:0016226: iron-sulfur cluster assembly3.01E-02
197GO:0071369: cellular response to ethylene stimulus3.20E-02
198GO:0009625: response to insect3.20E-02
199GO:0009561: megagametogenesis3.40E-02
200GO:0009306: protein secretion3.40E-02
201GO:0042391: regulation of membrane potential3.81E-02
202GO:0016192: vesicle-mediated transport3.93E-02
203GO:0006885: regulation of pH4.01E-02
204GO:0048544: recognition of pollen4.23E-02
205GO:0009414: response to water deprivation4.40E-02
206GO:0002229: defense response to oomycetes4.66E-02
207GO:0016032: viral process4.88E-02
208GO:0019761: glucosinolate biosynthetic process4.88E-02
209GO:0007264: small GTPase mediated signal transduction4.88E-02
RankGO TermAdjusted P value
1GO:0005522: profilin binding0.00E+00
2GO:0004865: protein serine/threonine phosphatase inhibitor activity0.00E+00
3GO:0004107: chorismate synthase activity0.00E+00
4GO:0005212: structural constituent of eye lens0.00E+00
5GO:2001080: chitosan binding0.00E+00
6GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
7GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
8GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
9GO:0008734: L-aspartate oxidase activity0.00E+00
10GO:0070696: transmembrane receptor protein serine/threonine kinase binding2.87E-06
11GO:0016301: kinase activity8.12E-06
12GO:0004674: protein serine/threonine kinase activity3.11E-05
13GO:0005515: protein binding4.98E-05
14GO:0005524: ATP binding7.23E-05
15GO:0019199: transmembrane receptor protein kinase activity1.18E-04
16GO:0050373: UDP-arabinose 4-epimerase activity1.18E-04
17GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.36E-04
18GO:0004012: phospholipid-translocating ATPase activity3.46E-04
19GO:0003978: UDP-glucose 4-epimerase activity3.46E-04
20GO:0008446: GDP-mannose 4,6-dehydratase activity4.53E-04
21GO:0004657: proline dehydrogenase activity4.53E-04
22GO:0046481: digalactosyldiacylglycerol synthase activity4.53E-04
23GO:0010285: L,L-diaminopimelate aminotransferase activity4.53E-04
24GO:0032050: clathrin heavy chain binding4.53E-04
25GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity4.53E-04
26GO:1901149: salicylic acid binding4.53E-04
27GO:0004842: ubiquitin-protein transferase activity5.89E-04
28GO:0004675: transmembrane receptor protein serine/threonine kinase activity7.30E-04
29GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity9.79E-04
30GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity9.79E-04
31GO:0015036: disulfide oxidoreductase activity9.79E-04
32GO:0048531: beta-1,3-galactosyltransferase activity9.79E-04
33GO:0008728: GTP diphosphokinase activity9.79E-04
34GO:0050291: sphingosine N-acyltransferase activity9.79E-04
35GO:0047364: desulfoglucosinolate sulfotransferase activity9.79E-04
36GO:0015152: glucose-6-phosphate transmembrane transporter activity9.79E-04
37GO:0004568: chitinase activity1.11E-03
38GO:0008559: xenobiotic-transporting ATPase activity1.28E-03
39GO:0071917: triose-phosphate transmembrane transporter activity1.59E-03
40GO:0015238: drug transmembrane transporter activity2.01E-03
41GO:0004190: aspartic-type endopeptidase activity2.11E-03
42GO:0035250: UDP-galactosyltransferase activity2.31E-03
43GO:0017089: glycolipid transporter activity2.31E-03
44GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity2.31E-03
45GO:0019201: nucleotide kinase activity2.31E-03
46GO:0043424: protein histidine kinase binding2.88E-03
47GO:0015120: phosphoglycerate transmembrane transporter activity3.10E-03
48GO:0051861: glycolipid binding3.10E-03
49GO:0033612: receptor serine/threonine kinase binding3.17E-03
50GO:0015297: antiporter activity3.48E-03
51GO:0004040: amidase activity3.98E-03
52GO:0005471: ATP:ADP antiporter activity3.98E-03
53GO:0045431: flavonol synthase activity3.98E-03
54GO:1990714: hydroxyproline O-galactosyltransferase activity4.92E-03
55GO:0005509: calcium ion binding5.22E-03
56GO:0042626: ATPase activity, coupled to transmembrane movement of substances5.38E-03
57GO:0031625: ubiquitin protein ligase binding5.89E-03
58GO:0004017: adenylate kinase activity5.94E-03
59GO:0004656: procollagen-proline 4-dioxygenase activity5.94E-03
60GO:0004723: calcium-dependent protein serine/threonine phosphatase activity5.94E-03
61GO:0004559: alpha-mannosidase activity5.94E-03
62GO:0019901: protein kinase binding6.00E-03
63GO:0043295: glutathione binding7.03E-03
64GO:0004714: transmembrane receptor protein tyrosine kinase activity8.18E-03
65GO:0004430: 1-phosphatidylinositol 4-kinase activity9.38E-03
66GO:0008271: secondary active sulfate transmembrane transporter activity9.38E-03
67GO:0008375: acetylglucosaminyltransferase activity1.04E-02
68GO:0071949: FAD binding1.07E-02
69GO:0004713: protein tyrosine kinase activity1.34E-02
70GO:0005545: 1-phosphatidylinositol binding1.34E-02
71GO:0015020: glucuronosyltransferase activity1.34E-02
72GO:0004672: protein kinase activity1.41E-02
73GO:0005543: phospholipid binding1.48E-02
74GO:0004722: protein serine/threonine phosphatase activity1.52E-02
75GO:0015116: sulfate transmembrane transporter activity1.63E-02
76GO:0008378: galactosyltransferase activity1.63E-02
77GO:0005315: inorganic phosphate transmembrane transporter activity1.79E-02
78GO:0031072: heat shock protein binding1.79E-02
79GO:0004364: glutathione transferase activity1.92E-02
80GO:0005215: transporter activity2.10E-02
81GO:0008061: chitin binding2.12E-02
82GO:0008146: sulfotransferase activity2.12E-02
83GO:0030552: cAMP binding2.12E-02
84GO:0030553: cGMP binding2.12E-02
85GO:0031418: L-ascorbic acid binding2.46E-02
86GO:0003954: NADH dehydrogenase activity2.46E-02
87GO:0005216: ion channel activity2.64E-02
88GO:0008324: cation transmembrane transporter activity2.64E-02
89GO:0051087: chaperone binding2.64E-02
90GO:0000287: magnesium ion binding2.76E-02
91GO:0016298: lipase activity2.80E-02
92GO:0019706: protein-cysteine S-palmitoyltransferase activity2.82E-02
93GO:0043531: ADP binding3.17E-02
94GO:0030551: cyclic nucleotide binding3.81E-02
95GO:0005451: monovalent cation:proton antiporter activity3.81E-02
96GO:0005249: voltage-gated potassium channel activity3.81E-02
97GO:0046873: metal ion transmembrane transporter activity4.01E-02
98GO:0030276: clathrin binding4.01E-02
99GO:0015299: solute:proton antiporter activity4.23E-02
100GO:0010181: FMN binding4.23E-02
101GO:0043565: sequence-specific DNA binding4.24E-02
102GO:0004872: receptor activity4.44E-02
103GO:0016758: transferase activity, transferring hexosyl groups4.67E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane9.49E-09
2GO:0005901: caveola9.09E-06
3GO:0016021: integral component of membrane3.11E-04
4GO:0005911: cell-cell junction4.53E-04
5GO:0000145: exocyst9.19E-04
6GO:0031304: intrinsic component of mitochondrial inner membrane9.79E-04
7GO:0031314: extrinsic component of mitochondrial inner membrane9.79E-04
8GO:0030139: endocytic vesicle1.59E-03
9GO:0070062: extracellular exosome2.31E-03
10GO:0000164: protein phosphatase type 1 complex3.98E-03
11GO:0000815: ESCRT III complex5.94E-03
12GO:0032580: Golgi cisterna membrane7.80E-03
13GO:0005740: mitochondrial envelope1.34E-02
14GO:0030125: clathrin vesicle coat1.34E-02
15GO:0000325: plant-type vacuole1.41E-02
16GO:0048471: perinuclear region of cytoplasm1.48E-02
17GO:0005795: Golgi stack2.12E-02
18GO:0005758: mitochondrial intermembrane space2.46E-02
19GO:0005794: Golgi apparatus2.65E-02
20GO:0005741: mitochondrial outer membrane2.82E-02
21GO:0005905: clathrin-coated pit2.82E-02
22GO:0005635: nuclear envelope2.90E-02
23GO:0005737: cytoplasm3.11E-02
24GO:0030136: clathrin-coated vesicle3.60E-02
25GO:0012505: endomembrane system3.73E-02
26GO:0005774: vacuolar membrane3.74E-02
27GO:0005789: endoplasmic reticulum membrane3.82E-02
28GO:0005768: endosome3.85E-02
29GO:0005770: late endosome4.01E-02
30GO:0005654: nucleoplasm4.67E-02
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Gene type



Gene DE type