Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G39550

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006858: extracellular transport0.00E+00
2GO:1903578: regulation of ATP metabolic process0.00E+00
3GO:0090630: activation of GTPase activity3.35E-06
4GO:0009164: nucleoside catabolic process2.41E-05
5GO:1902600: hydrogen ion transmembrane transport1.33E-04
6GO:0071586: CAAX-box protein processing1.33E-04
7GO:0032491: detection of molecule of fungal origin1.33E-04
8GO:0031338: regulation of vesicle fusion1.33E-04
9GO:0060862: negative regulation of floral organ abscission1.33E-04
10GO:0080120: CAAX-box protein maturation1.33E-04
11GO:0046208: spermine catabolic process1.33E-04
12GO:0019374: galactolipid metabolic process3.07E-04
13GO:0002240: response to molecule of oomycetes origin3.07E-04
14GO:0031349: positive regulation of defense response3.07E-04
15GO:1901703: protein localization involved in auxin polar transport3.07E-04
16GO:0080026: response to indolebutyric acid3.07E-04
17GO:2000693: positive regulation of seed maturation3.07E-04
18GO:0042814: monopolar cell growth3.07E-04
19GO:0006598: polyamine catabolic process5.06E-04
20GO:0009062: fatty acid catabolic process5.06E-04
21GO:0051176: positive regulation of sulfur metabolic process5.06E-04
22GO:0072661: protein targeting to plasma membrane5.06E-04
23GO:0080024: indolebutyric acid metabolic process7.24E-04
24GO:0046513: ceramide biosynthetic process7.24E-04
25GO:0009742: brassinosteroid mediated signaling pathway9.34E-04
26GO:0045227: capsule polysaccharide biosynthetic process9.59E-04
27GO:0033358: UDP-L-arabinose biosynthetic process9.59E-04
28GO:0000919: cell plate assembly9.59E-04
29GO:0030308: negative regulation of cell growth1.21E-03
30GO:0000304: response to singlet oxygen1.21E-03
31GO:0098719: sodium ion import across plasma membrane1.21E-03
32GO:0071805: potassium ion transmembrane transport1.44E-03
33GO:0009920: cell plate formation involved in plant-type cell wall biogenesis1.49E-03
34GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione1.49E-03
35GO:0060918: auxin transport1.49E-03
36GO:0010337: regulation of salicylic acid metabolic process1.49E-03
37GO:0002238: response to molecule of fungal origin1.49E-03
38GO:0010942: positive regulation of cell death1.49E-03
39GO:0051510: regulation of unidimensional cell growth2.09E-03
40GO:0006644: phospholipid metabolic process2.42E-03
41GO:0010497: plasmodesmata-mediated intercellular transport2.77E-03
42GO:0010204: defense response signaling pathway, resistance gene-independent2.77E-03
43GO:0007338: single fertilization3.13E-03
44GO:0009051: pentose-phosphate shunt, oxidative branch3.13E-03
45GO:0090333: regulation of stomatal closure3.13E-03
46GO:0006887: exocytosis3.13E-03
47GO:0048354: mucilage biosynthetic process involved in seed coat development3.50E-03
48GO:2000280: regulation of root development3.50E-03
49GO:0008202: steroid metabolic process3.50E-03
50GO:0051453: regulation of intracellular pH3.50E-03
51GO:1900426: positive regulation of defense response to bacterium3.50E-03
52GO:0010215: cellulose microfibril organization3.89E-03
53GO:0030148: sphingolipid biosynthetic process4.30E-03
54GO:0009809: lignin biosynthetic process4.56E-03
55GO:0006813: potassium ion transport4.56E-03
56GO:0071365: cellular response to auxin stimulus4.72E-03
57GO:0010102: lateral root morphogenesis5.15E-03
58GO:0006006: glucose metabolic process5.15E-03
59GO:0002237: response to molecule of bacterial origin5.60E-03
60GO:0010540: basipetal auxin transport5.60E-03
61GO:0009225: nucleotide-sugar metabolic process6.06E-03
62GO:0005992: trehalose biosynthetic process7.01E-03
63GO:0008152: metabolic process7.26E-03
64GO:0009269: response to desiccation8.02E-03
65GO:0016226: iron-sulfur cluster assembly8.55E-03
66GO:0071456: cellular response to hypoxia8.55E-03
67GO:0009058: biosynthetic process8.56E-03
68GO:0006012: galactose metabolic process9.08E-03
69GO:0010227: floral organ abscission9.08E-03
70GO:0042391: regulation of membrane potential1.08E-02
71GO:0000413: protein peptidyl-prolyl isomerization1.08E-02
72GO:0006885: regulation of pH1.13E-02
73GO:0006814: sodium ion transport1.19E-02
74GO:0006891: intra-Golgi vesicle-mediated transport1.32E-02
75GO:0006635: fatty acid beta-oxidation1.32E-02
76GO:0032502: developmental process1.38E-02
77GO:0009630: gravitropism1.38E-02
78GO:0050832: defense response to fungus1.43E-02
79GO:0009567: double fertilization forming a zygote and endosperm1.51E-02
80GO:0006464: cellular protein modification process1.51E-02
81GO:0006914: autophagy1.51E-02
82GO:0006904: vesicle docking involved in exocytosis1.57E-02
83GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.78E-02
84GO:0006457: protein folding1.84E-02
85GO:0006906: vesicle fusion1.85E-02
86GO:0006974: cellular response to DNA damage stimulus1.85E-02
87GO:0006950: response to stress1.92E-02
88GO:0016049: cell growth1.99E-02
89GO:0048767: root hair elongation2.14E-02
90GO:0016192: vesicle-mediated transport2.27E-02
91GO:0016051: carbohydrate biosynthetic process2.44E-02
92GO:0006886: intracellular protein transport2.67E-02
93GO:0006839: mitochondrial transport2.68E-02
94GO:0006897: endocytosis2.76E-02
95GO:0051707: response to other organism2.92E-02
96GO:0000209: protein polyubiquitination3.01E-02
97GO:0009644: response to high light intensity3.09E-02
98GO:0006979: response to oxidative stress3.26E-02
99GO:0048364: root development3.33E-02
100GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process3.35E-02
101GO:0042538: hyperosmotic salinity response3.44E-02
102GO:0006812: cation transport3.44E-02
103GO:0006417: regulation of translation3.89E-02
104GO:0009620: response to fungus4.36E-02
105GO:0018105: peptidyl-serine phosphorylation4.74E-02
RankGO TermAdjusted P value
1GO:1990482: sphingolipid alpha-glucuronosyltransferase activity0.00E+00
2GO:0052894: norspermine:oxygen oxidoreductase activity1.33E-04
3GO:0015927: trehalase activity1.33E-04
4GO:0052895: N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity1.33E-04
5GO:0019786: Atg8-specific protease activity1.33E-04
6GO:0004649: poly(ADP-ribose) glycohydrolase activity1.33E-04
7GO:0015020: glucuronosyltransferase activity1.96E-04
8GO:0015386: potassium:proton antiporter activity2.29E-04
9GO:0052901: spermine:oxygen oxidoreductase (spermidine-forming) activity3.07E-04
10GO:0022821: potassium ion antiporter activity3.07E-04
11GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity3.07E-04
12GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity3.07E-04
13GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity3.07E-04
14GO:0032934: sterol binding3.07E-04
15GO:0019779: Atg8 activating enzyme activity3.07E-04
16GO:1990585: hydroxyproline O-arabinosyltransferase activity3.07E-04
17GO:0045140: inositol phosphoceramide synthase activity3.07E-04
18GO:0046592: polyamine oxidase activity5.06E-04
19GO:0042409: caffeoyl-CoA O-methyltransferase activity5.06E-04
20GO:0003955: NAD(P)H dehydrogenase (quinone) activity5.06E-04
21GO:0016595: glutamate binding5.06E-04
22GO:0004416: hydroxyacylglutathione hydrolase activity7.24E-04
23GO:0022890: inorganic cation transmembrane transporter activity7.24E-04
24GO:0004165: dodecenoyl-CoA delta-isomerase activity7.24E-04
25GO:0080044: quercetin 7-O-glucosyltransferase activity7.77E-04
26GO:0080043: quercetin 3-O-glucosyltransferase activity7.77E-04
27GO:0004345: glucose-6-phosphate dehydrogenase activity9.59E-04
28GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor9.59E-04
29GO:0019776: Atg8 ligase activity9.59E-04
30GO:0050373: UDP-arabinose 4-epimerase activity9.59E-04
31GO:0015299: solute:proton antiporter activity9.89E-04
32GO:0016758: transferase activity, transferring hexosyl groups1.11E-03
33GO:0017137: Rab GTPase binding1.21E-03
34GO:0005496: steroid binding1.21E-03
35GO:0015385: sodium:proton antiporter activity1.28E-03
36GO:0051920: peroxiredoxin activity1.78E-03
37GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides1.78E-03
38GO:0003978: UDP-glucose 4-epimerase activity1.78E-03
39GO:0008194: UDP-glycosyltransferase activity1.98E-03
40GO:0004620: phospholipase activity2.09E-03
41GO:0005096: GTPase activator activity2.20E-03
42GO:0016209: antioxidant activity2.42E-03
43GO:0052747: sinapyl alcohol dehydrogenase activity2.42E-03
44GO:0004714: transmembrane receptor protein tyrosine kinase activity2.42E-03
45GO:0008142: oxysterol binding2.77E-03
46GO:0071949: FAD binding3.13E-03
47GO:0045309: protein phosphorylated amino acid binding3.50E-03
48GO:0047617: acyl-CoA hydrolase activity3.50E-03
49GO:0008171: O-methyltransferase activity3.89E-03
50GO:0008047: enzyme activator activity3.89E-03
51GO:0004713: protein tyrosine kinase activity3.89E-03
52GO:0004805: trehalose-phosphatase activity3.89E-03
53GO:0019904: protein domain specific binding4.30E-03
54GO:0045551: cinnamyl-alcohol dehydrogenase activity4.72E-03
55GO:0045735: nutrient reservoir activity5.39E-03
56GO:0004175: endopeptidase activity5.60E-03
57GO:0030552: cAMP binding6.06E-03
58GO:0030553: cGMP binding6.06E-03
59GO:0005216: ion channel activity7.51E-03
60GO:0015079: potassium ion transmembrane transporter activity7.51E-03
61GO:0035251: UDP-glucosyltransferase activity8.02E-03
62GO:0030551: cyclic nucleotide binding1.08E-02
63GO:0005451: monovalent cation:proton antiporter activity1.08E-02
64GO:0005249: voltage-gated potassium channel activity1.08E-02
65GO:0010181: FMN binding1.19E-02
66GO:0004601: peroxidase activity1.74E-02
67GO:0004222: metalloendopeptidase activity2.21E-02
68GO:0030145: manganese ion binding2.29E-02
69GO:0000149: SNARE binding2.60E-02
70GO:0050661: NADP binding2.68E-02
71GO:0004364: glutathione transferase activity2.84E-02
72GO:0005484: SNAP receptor activity2.92E-02
73GO:0035091: phosphatidylinositol binding3.09E-02
74GO:0003755: peptidyl-prolyl cis-trans isomerase activity3.26E-02
75GO:0016874: ligase activity4.45E-02
76GO:0016887: ATPase activity4.91E-02
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Gene type



Gene DE type