gene detail

Gene description

TAIR ID: AT2G38170

Short description: cation exchanger 1

Pathogen responsiveness: -0.17

General responsiveness: 1.71

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

oxidation-reduction process, calcium ion transport, cellular manganese ion homeostasis, cellular zinc ion homeostasis, cold acclimation, phosphate ion homeostasis, response to salt stress

GO cellular component

membrane, plant-type vacuole membrane, vacuole, vacuolar membrane, integral component of membrane, chloroplast

GO molecular function

calcium:proton antiporter activity, calcium:cation antiporter activity, calcium ion transmembrane transporter activity, protein binding

Protein domain

Pfam	PF01699, Sodium/calcium exchanger protein

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G13450, AT1G24260, AT2G43010

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 8

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE56094_WT_PSTDC3000  view
GSE26679_EDR1_GC  view

Differentially expressed condition

16 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Gai, control	Gai, Flg22 1 h	-2.32	2.29E-02
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 1 h	-1.52	2.06E-02
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 2 h	-1.90	2.84E-03
GSE17464	Laer, control	Laer, Flg22 1 h	-2.09	3.67E-04
GSE17464	Laer, control	Laer, Flg22 2 h	-2.56	2.65E-05
GSE17464	Penta, control	Penta, Flg22 2 h	-2.45	3.33E-05
GSE17464	Penta, control	Penta, Flg22 2 h	-3.30	4.05E-07
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.45	5.51E-04
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	-2.48	1.34E-09
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	-2.33	2.52E-09
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-1.95	2.59E-08
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.53	1.21E-05
GSE56094	Col, WT, control 12 h	Col, WT, hrpA- 12 h	-1.56	5.32E-05
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-1.68	1.37E-06
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	-1.56	4.13E-03
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	-1.51	5.64E-03