gene detail

Gene description

TAIR ID: AT2G30200

Short description: catalytics;transferases;[acyl-carrier-protein] S-malonyltransferases;binding

Pathogen responsiveness: -1.19

General responsiveness: -2.17

Orthologous

Rice:

OS03G0297400

Maize:

GRMZM2G029543

Wheat: No orthologous gene

GO biological process

fatty acid biosynthetic process, metabolic process

GO cellular component

chloroplast stroma, chloroplast, mitochondrion

GO molecular function

catalytic activity, [acyl-carrier-protein] S-malonyltransferase activity

Protein domain

Pfam	PF00698, Acyl transferase domain
SMART	SM00827, PKS_AT

Metabolic pathway

PWY-6799: fatty acid biosynthesis (plant mitochondria)
PWY-4381: fatty acid biosynthesis initiation I
PWY-5156: superpathway of fatty acid biosynthesis II (plant)

KEGG pathway

PATH:ath01212: Fatty acid metabolism
PATH:ath00061: Fatty acid biosynthesis
PATH:ath00261: Monobactam biosynthesis

Transcriptional regulation

Regulator:
AT2G02820, AT1G14350

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

6 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-1.53	3.64E-04
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.70	9.96E-05
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-1.77	9.92E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.88	1.66E-10
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-2.03	3.98E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-1.60	1.38E-11