GO Enrichment Analysis of Co-expressed Genes with
AT2G30200
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042407: cristae formation | 0.00E+00 |
| 2 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 3 | GO:0006223: uracil salvage | 0.00E+00 |
| 4 | GO:0018160: peptidyl-pyrromethane cofactor linkage | 0.00E+00 |
| 5 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 6 | GO:0006353: DNA-templated transcription, termination | 6.68E-10 |
| 7 | GO:0006782: protoporphyrinogen IX biosynthetic process | 7.54E-07 |
| 8 | GO:0015995: chlorophyll biosynthetic process | 1.02E-06 |
| 9 | GO:0009658: chloroplast organization | 6.39E-06 |
| 10 | GO:0032502: developmental process | 1.97E-05 |
| 11 | GO:0042255: ribosome assembly | 2.95E-05 |
| 12 | GO:0006783: heme biosynthetic process | 4.72E-05 |
| 13 | GO:0006779: porphyrin-containing compound biosynthetic process | 5.76E-05 |
| 14 | GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process | 6.58E-05 |
| 15 | GO:0006436: tryptophanyl-tRNA aminoacylation | 6.58E-05 |
| 16 | GO:0006434: seryl-tRNA aminoacylation | 6.58E-05 |
| 17 | GO:0006423: cysteinyl-tRNA aminoacylation | 1.59E-04 |
| 18 | GO:0018026: peptidyl-lysine monomethylation | 1.59E-04 |
| 19 | GO:0008616: queuosine biosynthetic process | 1.59E-04 |
| 20 | GO:0043039: tRNA aminoacylation | 1.59E-04 |
| 21 | GO:0007005: mitochondrion organization | 2.45E-04 |
| 22 | GO:0051604: protein maturation | 2.69E-04 |
| 23 | GO:0006165: nucleoside diphosphate phosphorylation | 3.90E-04 |
| 24 | GO:0006228: UTP biosynthetic process | 3.90E-04 |
| 25 | GO:0046739: transport of virus in multicellular host | 3.90E-04 |
| 26 | GO:0051085: chaperone mediated protein folding requiring cofactor | 3.90E-04 |
| 27 | GO:0010239: chloroplast mRNA processing | 3.90E-04 |
| 28 | GO:0006241: CTP biosynthetic process | 3.90E-04 |
| 29 | GO:0044206: UMP salvage | 5.20E-04 |
| 30 | GO:0006183: GTP biosynthetic process | 5.20E-04 |
| 31 | GO:0010027: thylakoid membrane organization | 6.52E-04 |
| 32 | GO:0048359: mucilage metabolic process involved in seed coat development | 6.60E-04 |
| 33 | GO:0043097: pyrimidine nucleoside salvage | 6.60E-04 |
| 34 | GO:0006206: pyrimidine nucleobase metabolic process | 8.06E-04 |
| 35 | GO:0006655: phosphatidylglycerol biosynthetic process | 8.06E-04 |
| 36 | GO:0042793: transcription from plastid promoter | 8.06E-04 |
| 37 | GO:0048481: plant ovule development | 8.40E-04 |
| 38 | GO:0042026: protein refolding | 9.59E-04 |
| 39 | GO:1901259: chloroplast rRNA processing | 9.59E-04 |
| 40 | GO:0017148: negative regulation of translation | 9.59E-04 |
| 41 | GO:0010019: chloroplast-nucleus signaling pathway | 9.59E-04 |
| 42 | GO:0006826: iron ion transport | 1.12E-03 |
| 43 | GO:0006875: cellular metal ion homeostasis | 1.29E-03 |
| 44 | GO:0052543: callose deposition in cell wall | 1.29E-03 |
| 45 | GO:0048564: photosystem I assembly | 1.29E-03 |
| 46 | GO:0010497: plasmodesmata-mediated intercellular transport | 1.47E-03 |
| 47 | GO:0048589: developmental growth | 1.65E-03 |
| 48 | GO:0015780: nucleotide-sugar transport | 1.65E-03 |
| 49 | GO:0043067: regulation of programmed cell death | 1.85E-03 |
| 50 | GO:0045036: protein targeting to chloroplast | 2.05E-03 |
| 51 | GO:0009089: lysine biosynthetic process via diaminopimelate | 2.26E-03 |
| 52 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.48E-03 |
| 53 | GO:0045037: protein import into chloroplast stroma | 2.48E-03 |
| 54 | GO:0010039: response to iron ion | 3.16E-03 |
| 55 | GO:0007010: cytoskeleton organization | 3.65E-03 |
| 56 | GO:0009116: nucleoside metabolic process | 3.65E-03 |
| 57 | GO:0006418: tRNA aminoacylation for protein translation | 3.90E-03 |
| 58 | GO:0006633: fatty acid biosynthetic process | 3.95E-03 |
| 59 | GO:0009411: response to UV | 4.70E-03 |
| 60 | GO:0008380: RNA splicing | 5.17E-03 |
| 61 | GO:0016117: carotenoid biosynthetic process | 5.26E-03 |
| 62 | GO:0008033: tRNA processing | 5.55E-03 |
| 63 | GO:0010197: polar nucleus fusion | 5.85E-03 |
| 64 | GO:0009741: response to brassinosteroid | 5.85E-03 |
| 65 | GO:0008654: phospholipid biosynthetic process | 6.45E-03 |
| 66 | GO:0042254: ribosome biogenesis | 6.82E-03 |
| 67 | GO:0009627: systemic acquired resistance | 9.44E-03 |
| 68 | GO:0009817: defense response to fungus, incompatible interaction | 1.05E-02 |
| 69 | GO:0008219: cell death | 1.05E-02 |
| 70 | GO:0048767: root hair elongation | 1.09E-02 |
| 71 | GO:0045087: innate immune response | 1.24E-02 |
| 72 | GO:0008152: metabolic process | 1.35E-02 |
| 73 | GO:0006839: mitochondrial transport | 1.36E-02 |
| 74 | GO:0006631: fatty acid metabolic process | 1.40E-02 |
| 75 | GO:0042542: response to hydrogen peroxide | 1.45E-02 |
| 76 | GO:0008643: carbohydrate transport | 1.57E-02 |
| 77 | GO:0009585: red, far-red light phototransduction | 1.84E-02 |
| 78 | GO:0009735: response to cytokinin | 2.00E-02 |
| 79 | GO:0006096: glycolytic process | 2.07E-02 |
| 80 | GO:0009742: brassinosteroid mediated signaling pathway | 2.46E-02 |
| 81 | GO:0006457: protein folding | 2.83E-02 |
| 82 | GO:0009790: embryo development | 3.09E-02 |
| 83 | GO:0016036: cellular response to phosphate starvation | 3.32E-02 |
| 84 | GO:0009451: RNA modification | 3.54E-02 |
| 85 | GO:0007166: cell surface receptor signaling pathway | 3.83E-02 |
| 86 | GO:0042742: defense response to bacterium | 4.41E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000979: RNA polymerase II core promoter sequence-specific DNA binding | 0.00E+00 |
| 2 | GO:0004418: hydroxymethylbilane synthase activity | 0.00E+00 |
| 3 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 4 | GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity | 0.00E+00 |
| 5 | GO:0004828: serine-tRNA ligase activity | 6.58E-05 |
| 6 | GO:0004853: uroporphyrinogen decarboxylase activity | 6.58E-05 |
| 7 | GO:0009374: biotin binding | 6.58E-05 |
| 8 | GO:0015088: copper uptake transmembrane transporter activity | 6.58E-05 |
| 9 | GO:0004830: tryptophan-tRNA ligase activity | 6.58E-05 |
| 10 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 6.58E-05 |
| 11 | GO:0004560: alpha-L-fucosidase activity | 6.58E-05 |
| 12 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 6.58E-05 |
| 13 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 1.59E-04 |
| 14 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 1.59E-04 |
| 15 | GO:0004817: cysteine-tRNA ligase activity | 1.59E-04 |
| 16 | GO:0008479: queuine tRNA-ribosyltransferase activity | 1.59E-04 |
| 17 | GO:0070402: NADPH binding | 2.69E-04 |
| 18 | GO:0003727: single-stranded RNA binding | 2.92E-04 |
| 19 | GO:0019843: rRNA binding | 3.48E-04 |
| 20 | GO:0016851: magnesium chelatase activity | 3.90E-04 |
| 21 | GO:0004550: nucleoside diphosphate kinase activity | 3.90E-04 |
| 22 | GO:0043023: ribosomal large subunit binding | 3.90E-04 |
| 23 | GO:0004300: enoyl-CoA hydratase activity | 3.90E-04 |
| 24 | GO:0008097: 5S rRNA binding | 3.90E-04 |
| 25 | GO:0001872: (1->3)-beta-D-glucan binding | 3.90E-04 |
| 26 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 3.90E-04 |
| 27 | GO:0016279: protein-lysine N-methyltransferase activity | 5.20E-04 |
| 28 | GO:0004845: uracil phosphoribosyltransferase activity | 5.20E-04 |
| 29 | GO:0004040: amidase activity | 6.60E-04 |
| 30 | GO:0030414: peptidase inhibitor activity | 6.60E-04 |
| 31 | GO:0003989: acetyl-CoA carboxylase activity | 6.60E-04 |
| 32 | GO:0004605: phosphatidate cytidylyltransferase activity | 8.06E-04 |
| 33 | GO:0004849: uridine kinase activity | 9.59E-04 |
| 34 | GO:0005381: iron ion transmembrane transporter activity | 1.85E-03 |
| 35 | GO:0003690: double-stranded DNA binding | 1.85E-03 |
| 36 | GO:0044183: protein binding involved in protein folding | 2.26E-03 |
| 37 | GO:0051082: unfolded protein binding | 2.53E-03 |
| 38 | GO:0031072: heat shock protein binding | 2.70E-03 |
| 39 | GO:0008266: poly(U) RNA binding | 2.93E-03 |
| 40 | GO:0004176: ATP-dependent peptidase activity | 4.17E-03 |
| 41 | GO:0008514: organic anion transmembrane transporter activity | 4.98E-03 |
| 42 | GO:0004812: aminoacyl-tRNA ligase activity | 5.26E-03 |
| 43 | GO:0008483: transaminase activity | 8.06E-03 |
| 44 | GO:0008237: metallopeptidase activity | 8.06E-03 |
| 45 | GO:0005200: structural constituent of cytoskeleton | 8.06E-03 |
| 46 | GO:0030247: polysaccharide binding | 9.79E-03 |
| 47 | GO:0008236: serine-type peptidase activity | 1.02E-02 |
| 48 | GO:0042803: protein homodimerization activity | 1.04E-02 |
| 49 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.05E-02 |
| 50 | GO:0043621: protein self-association | 1.57E-02 |
| 51 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.66E-02 |
| 52 | GO:0022857: transmembrane transporter activity | 2.26E-02 |
| 53 | GO:0016758: transferase activity, transferring hexosyl groups | 2.72E-02 |
| 54 | GO:0030170: pyridoxal phosphate binding | 2.99E-02 |
| 55 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 3.32E-02 |
| 56 | GO:0005525: GTP binding | 3.59E-02 |
| 57 | GO:0008194: UDP-glycosyltransferase activity | 3.78E-02 |
| 58 | GO:0042802: identical protein binding | 4.13E-02 |
| 59 | GO:0003723: RNA binding | 4.32E-02 |
| 60 | GO:0008168: methyltransferase activity | 4.63E-02 |
| 61 | GO:0016788: hydrolase activity, acting on ester bonds | 4.82E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 3.22E-27 |
| 2 | GO:0009941: chloroplast envelope | 4.86E-21 |
| 3 | GO:0009570: chloroplast stroma | 6.35E-17 |
| 4 | GO:0009536: plastid | 1.11E-05 |
| 5 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 6.58E-05 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 6.59E-05 |
| 7 | GO:0009508: plastid chromosome | 1.11E-04 |
| 8 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 1.59E-04 |
| 9 | GO:0009317: acetyl-CoA carboxylase complex | 2.69E-04 |
| 10 | GO:0031897: Tic complex | 5.20E-04 |
| 11 | GO:0009526: plastid envelope | 5.20E-04 |
| 12 | GO:0009295: nucleoid | 5.82E-04 |
| 13 | GO:0055035: plastid thylakoid membrane | 6.60E-04 |
| 14 | GO:0009707: chloroplast outer membrane | 8.40E-04 |
| 15 | GO:0009579: thylakoid | 9.02E-04 |
| 16 | GO:0009706: chloroplast inner membrane | 2.53E-03 |
| 17 | GO:0009543: chloroplast thylakoid lumen | 3.15E-03 |
| 18 | GO:0042651: thylakoid membrane | 3.90E-03 |
| 19 | GO:0009654: photosystem II oxygen evolving complex | 3.90E-03 |
| 20 | GO:0019898: extrinsic component of membrane | 6.45E-03 |
| 21 | GO:0010319: stromule | 8.06E-03 |
| 22 | GO:0031969: chloroplast membrane | 8.30E-03 |
| 23 | GO:0030529: intracellular ribonucleoprotein complex | 8.74E-03 |
| 24 | GO:0031977: thylakoid lumen | 1.40E-02 |
| 25 | GO:0005856: cytoskeleton | 1.62E-02 |
| 26 | GO:0005739: mitochondrion | 1.83E-02 |
| 27 | GO:0022626: cytosolic ribosome | 2.09E-02 |
| 28 | GO:0009534: chloroplast thylakoid | 2.64E-02 |
| 29 | GO:0005623: cell | 2.82E-02 |
| 30 | GO:0046658: anchored component of plasma membrane | 4.26E-02 |
| 31 | GO:0005840: ribosome | 4.62E-02 |
| 32 | GO:0048046: apoplast | 4.86E-02 |