Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G30200

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0018023: peptidyl-lysine trimethylation0.00E+00
2GO:0071474: cellular hyperosmotic response0.00E+00
3GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process0.00E+00
4GO:0034337: RNA folding0.00E+00
5GO:0002184: cytoplasmic translational termination0.00E+00
6GO:0006223: uracil salvage0.00E+00
7GO:0016553: base conversion or substitution editing0.00E+00
8GO:0090470: shoot organ boundary specification0.00E+00
9GO:0090279: regulation of calcium ion import0.00E+00
10GO:0042821: pyridoxal biosynthetic process0.00E+00
11GO:0042820: vitamin B6 catabolic process0.00E+00
12GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
13GO:0015995: chlorophyll biosynthetic process9.02E-15
14GO:0015979: photosynthesis1.94E-08
15GO:0009735: response to cytokinin9.21E-08
16GO:0019252: starch biosynthetic process9.54E-08
17GO:0010021: amylopectin biosynthetic process9.83E-07
18GO:0055114: oxidation-reduction process1.16E-06
19GO:0006782: protoporphyrinogen IX biosynthetic process1.44E-06
20GO:0048564: photosystem I assembly1.72E-05
21GO:0032544: plastid translation2.45E-05
22GO:0006783: heme biosynthetic process3.35E-05
23GO:0006779: porphyrin-containing compound biosynthetic process4.44E-05
24GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly5.66E-05
25GO:0010207: photosystem II assembly1.31E-04
26GO:0006412: translation1.86E-04
27GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway2.21E-04
28GO:1901259: chloroplast rRNA processing2.97E-04
29GO:0009854: oxidative photosynthetic carbon pathway2.97E-04
30GO:0009658: chloroplast organization3.05E-04
31GO:0000481: maturation of 5S rRNA4.10E-04
32GO:1904964: positive regulation of phytol biosynthetic process4.10E-04
33GO:0065002: intracellular protein transmembrane transport4.10E-04
34GO:0043686: co-translational protein modification4.10E-04
35GO:0048363: mucilage pectin metabolic process4.10E-04
36GO:0009443: pyridoxal 5'-phosphate salvage4.10E-04
37GO:0009090: homoserine biosynthetic process4.10E-04
38GO:1902478: negative regulation of defense response to bacterium, incompatible interaction4.10E-04
39GO:0043489: RNA stabilization4.10E-04
40GO:0015671: oxygen transport4.10E-04
41GO:1904966: positive regulation of vitamin E biosynthetic process4.10E-04
42GO:0043953: protein transport by the Tat complex4.10E-04
43GO:0071482: cellular response to light stimulus5.86E-04
44GO:0018026: peptidyl-lysine monomethylation8.88E-04
45GO:0000256: allantoin catabolic process8.88E-04
46GO:0006435: threonyl-tRNA aminoacylation8.88E-04
47GO:0071668: plant-type cell wall assembly8.88E-04
48GO:0080183: response to photooxidative stress8.88E-04
49GO:0006729: tetrahydrobiopterin biosynthetic process8.88E-04
50GO:0030388: fructose 1,6-bisphosphate metabolic process8.88E-04
51GO:0051262: protein tetramerization8.88E-04
52GO:0010275: NAD(P)H dehydrogenase complex assembly8.88E-04
53GO:1902326: positive regulation of chlorophyll biosynthetic process8.88E-04
54GO:0009089: lysine biosynthetic process via diaminopimelate1.11E-03
55GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition1.44E-03
56GO:0005977: glycogen metabolic process1.44E-03
57GO:0006094: gluconeogenesis1.44E-03
58GO:0006000: fructose metabolic process1.44E-03
59GO:0010136: ureide catabolic process1.44E-03
60GO:0034051: negative regulation of plant-type hypersensitive response1.44E-03
61GO:2001141: regulation of RNA biosynthetic process2.08E-03
62GO:0009067: aspartate family amino acid biosynthetic process2.08E-03
63GO:0010371: regulation of gibberellin biosynthetic process2.08E-03
64GO:0006020: inositol metabolic process2.08E-03
65GO:0009152: purine ribonucleotide biosynthetic process2.08E-03
66GO:0046653: tetrahydrofolate metabolic process2.08E-03
67GO:0009052: pentose-phosphate shunt, non-oxidative branch2.08E-03
68GO:0033014: tetrapyrrole biosynthetic process2.08E-03
69GO:0010731: protein glutathionylation2.08E-03
70GO:0006145: purine nucleobase catabolic process2.08E-03
71GO:1901332: negative regulation of lateral root development2.08E-03
72GO:0016051: carbohydrate biosynthetic process2.11E-03
73GO:0009853: photorespiration2.11E-03
74GO:0009768: photosynthesis, light harvesting in photosystem I2.48E-03
75GO:0044206: UMP salvage2.80E-03
76GO:0045727: positive regulation of translation2.80E-03
77GO:0006536: glutamate metabolic process2.80E-03
78GO:0006021: inositol biosynthetic process2.80E-03
79GO:0019748: secondary metabolic process2.98E-03
80GO:0006564: L-serine biosynthetic process3.59E-03
81GO:0045038: protein import into chloroplast thylakoid membrane3.59E-03
82GO:0043097: pyrimidine nucleoside salvage3.59E-03
83GO:0031365: N-terminal protein amino acid modification3.59E-03
84GO:0000304: response to singlet oxygen3.59E-03
85GO:0005975: carbohydrate metabolic process4.02E-03
86GO:0006206: pyrimidine nucleobase metabolic process4.44E-03
87GO:0006014: D-ribose metabolic process4.44E-03
88GO:0046855: inositol phosphate dephosphorylation4.44E-03
89GO:0042549: photosystem II stabilization4.44E-03
90GO:0000470: maturation of LSU-rRNA4.44E-03
91GO:0006655: phosphatidylglycerol biosynthetic process4.44E-03
92GO:0010190: cytochrome b6f complex assembly4.44E-03
93GO:0009088: threonine biosynthetic process5.35E-03
94GO:0042254: ribosome biogenesis5.94E-03
95GO:0009772: photosynthetic electron transport in photosystem II6.32E-03
96GO:0006614: SRP-dependent cotranslational protein targeting to membrane6.32E-03
97GO:0032508: DNA duplex unwinding7.35E-03
98GO:0016559: peroxisome fission7.35E-03
99GO:0005978: glycogen biosynthetic process7.35E-03
100GO:0010027: thylakoid membrane organization8.01E-03
101GO:0006526: arginine biosynthetic process8.43E-03
102GO:0017004: cytochrome complex assembly8.43E-03
103GO:0006002: fructose 6-phosphate metabolic process8.43E-03
104GO:0006754: ATP biosynthetic process9.58E-03
105GO:0010206: photosystem II repair9.58E-03
106GO:0019432: triglyceride biosynthetic process9.58E-03
107GO:0018298: protein-chromophore linkage1.05E-02
108GO:0009817: defense response to fungus, incompatible interaction1.05E-02
109GO:0031425: chloroplast RNA processing1.08E-02
110GO:0005982: starch metabolic process1.08E-02
111GO:0009086: methionine biosynthetic process1.08E-02
112GO:0048354: mucilage biosynthetic process involved in seed coat development1.08E-02
113GO:0006633: fatty acid biosynthetic process1.19E-02
114GO:0006535: cysteine biosynthetic process from serine1.20E-02
115GO:0007568: aging1.21E-02
116GO:0006352: DNA-templated transcription, initiation1.33E-02
117GO:0019684: photosynthesis, light reaction1.33E-02
118GO:0045087: innate immune response1.33E-02
119GO:0009773: photosynthetic electron transport in photosystem I1.33E-02
120GO:0008285: negative regulation of cell proliferation1.33E-02
121GO:0009451: RNA modification1.38E-02
122GO:0006790: sulfur compound metabolic process1.47E-02
123GO:0005983: starch catabolic process1.47E-02
124GO:0016024: CDP-diacylglycerol biosynthetic process1.47E-02
125GO:0006631: fatty acid metabolic process1.58E-02
126GO:0006807: nitrogen compound metabolic process1.61E-02
127GO:0018107: peptidyl-threonine phosphorylation1.61E-02
128GO:0009767: photosynthetic electron transport chain1.61E-02
129GO:0005986: sucrose biosynthetic process1.61E-02
130GO:0019253: reductive pentose-phosphate cycle1.75E-02
131GO:0009266: response to temperature stimulus1.75E-02
132GO:0010020: chloroplast fission1.75E-02
133GO:0046854: phosphatidylinositol phosphorylation1.90E-02
134GO:0009636: response to toxic substance1.93E-02
135GO:0006636: unsaturated fatty acid biosynthetic process2.05E-02
136GO:0019762: glucosinolate catabolic process2.05E-02
137GO:0006289: nucleotide-excision repair2.21E-02
138GO:0019344: cysteine biosynthetic process2.21E-02
139GO:0009116: nucleoside metabolic process2.21E-02
140GO:0000027: ribosomal large subunit assembly2.21E-02
141GO:0006364: rRNA processing2.32E-02
142GO:0007017: microtubule-based process2.37E-02
143GO:0010073: meristem maintenance2.37E-02
144GO:0008299: isoprenoid biosynthetic process2.37E-02
145GO:0048511: rhythmic process2.53E-02
146GO:0010431: seed maturation2.53E-02
147GO:0031408: oxylipin biosynthetic process2.53E-02
148GO:0016114: terpenoid biosynthetic process2.53E-02
149GO:0035428: hexose transmembrane transport2.70E-02
150GO:0080092: regulation of pollen tube growth2.70E-02
151GO:0016226: iron-sulfur cluster assembly2.70E-02
152GO:0006096: glycolytic process2.75E-02
153GO:0009625: response to insect2.87E-02
154GO:0010227: floral organ abscission2.87E-02
155GO:0006012: galactose metabolic process2.87E-02
156GO:0042335: cuticle development3.41E-02
157GO:0000271: polysaccharide biosynthetic process3.41E-02
158GO:0042631: cellular response to water deprivation3.41E-02
159GO:0046323: glucose import3.60E-02
160GO:0009741: response to brassinosteroid3.60E-02
161GO:0006520: cellular amino acid metabolic process3.60E-02
162GO:0045489: pectin biosynthetic process3.60E-02
163GO:0015986: ATP synthesis coupled proton transport3.79E-02
164GO:0009791: post-embryonic development3.99E-02
165GO:0000302: response to reactive oxygen species4.18E-02
166GO:0032502: developmental process4.38E-02
167GO:0042744: hydrogen peroxide catabolic process4.69E-02
168GO:0009567: double fertilization forming a zygote and endosperm4.79E-02
169GO:0006629: lipid metabolic process4.93E-02
RankGO TermAdjusted P value
1GO:0004853: uroporphyrinogen decarboxylase activity0.00E+00
2GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity0.00E+00
3GO:0003858: 3-hydroxybutyrate dehydrogenase activity0.00E+00
4GO:0008465: glycerate dehydrogenase activity0.00E+00
5GO:0046408: chlorophyll synthetase activity0.00E+00
6GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
7GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
8GO:0005048: signal sequence binding0.00E+00
9GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
10GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
11GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
12GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity0.00E+00
13GO:0008887: glycerate kinase activity0.00E+00
14GO:0050613: delta14-sterol reductase activity0.00E+00
15GO:0071522: ureidoglycine aminohydrolase activity0.00E+00
16GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
17GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
18GO:0019843: rRNA binding1.06E-09
19GO:0070402: NADPH binding7.08E-08
20GO:0008266: poly(U) RNA binding1.07E-07
21GO:0030267: glyoxylate reductase (NADP) activity2.60E-05
22GO:0003735: structural constituent of ribosome3.00E-05
23GO:0016851: magnesium chelatase activity5.66E-05
24GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor9.96E-05
25GO:0009011: starch synthase activity9.96E-05
26GO:0031072: heat shock protein binding1.10E-04
27GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity2.97E-04
28GO:0003746: translation elongation factor activity3.17E-04
29GO:0004325: ferrochelatase activity4.10E-04
30GO:0005080: protein kinase C binding4.10E-04
31GO:0042586: peptide deformylase activity4.10E-04
32GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity4.10E-04
33GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity4.10E-04
34GO:0016784: 3-mercaptopyruvate sulfurtransferase activity4.10E-04
35GO:0005344: oxygen transporter activity4.10E-04
36GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity4.10E-04
37GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity4.10E-04
38GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity4.10E-04
39GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity4.10E-04
40GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity4.10E-04
41GO:0005227: calcium activated cation channel activity4.10E-04
42GO:0016776: phosphotransferase activity, phosphate group as acceptor4.10E-04
43GO:0004856: xylulokinase activity4.10E-04
44GO:0004033: aldo-keto reductase (NADP) activity4.80E-04
45GO:0003755: peptidyl-prolyl cis-trans isomerase activity6.05E-04
46GO:0051287: NAD binding6.40E-04
47GO:0048038: quinone binding7.01E-04
48GO:0050017: L-3-cyanoalanine synthase activity8.88E-04
49GO:0042389: omega-3 fatty acid desaturase activity8.88E-04
50GO:0009977: proton motive force dependent protein transmembrane transporter activity8.88E-04
51GO:0004617: phosphoglycerate dehydrogenase activity8.88E-04
52GO:0052832: inositol monophosphate 3-phosphatase activity8.88E-04
53GO:0033201: alpha-1,4-glucan synthase activity8.88E-04
54GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity8.88E-04
55GO:0003844: 1,4-alpha-glucan branching enzyme activity8.88E-04
56GO:0016630: protochlorophyllide reductase activity8.88E-04
57GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity8.88E-04
58GO:0004829: threonine-tRNA ligase activity8.88E-04
59GO:0008934: inositol monophosphate 1-phosphatase activity8.88E-04
60GO:0019156: isoamylase activity8.88E-04
61GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase8.88E-04
62GO:0052833: inositol monophosphate 4-phosphatase activity8.88E-04
63GO:0004412: homoserine dehydrogenase activity8.88E-04
64GO:0016491: oxidoreductase activity9.92E-04
65GO:0016168: chlorophyll binding1.19E-03
66GO:0003729: mRNA binding1.36E-03
67GO:0004751: ribose-5-phosphate isomerase activity1.44E-03
68GO:0016742: hydroxymethyl-, formyl- and related transferase activity1.44E-03
69GO:0008864: formyltetrahydrofolate deformylase activity1.44E-03
70GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor1.44E-03
71GO:0005504: fatty acid binding1.44E-03
72GO:0043169: cation binding1.44E-03
73GO:0004373: glycogen (starch) synthase activity1.44E-03
74GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.44E-03
75GO:0004148: dihydrolipoyl dehydrogenase activity1.44E-03
76GO:0003723: RNA binding1.99E-03
77GO:0031409: pigment binding2.03E-03
78GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor2.08E-03
79GO:0043023: ribosomal large subunit binding2.08E-03
80GO:0004351: glutamate decarboxylase activity2.08E-03
81GO:0004072: aspartate kinase activity2.08E-03
82GO:0004792: thiosulfate sulfurtransferase activity2.08E-03
83GO:0005528: FK506 binding2.25E-03
84GO:0043495: protein anchor2.80E-03
85GO:0016279: protein-lysine N-methyltransferase activity2.80E-03
86GO:0001053: plastid sigma factor activity2.80E-03
87GO:0004845: uracil phosphoribosyltransferase activity2.80E-03
88GO:0016987: sigma factor activity2.80E-03
89GO:0070628: proteasome binding2.80E-03
90GO:0045430: chalcone isomerase activity2.80E-03
91GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity2.80E-03
92GO:0005525: GTP binding2.84E-03
93GO:0008374: O-acyltransferase activity3.59E-03
94GO:0003959: NADPH dehydrogenase activity3.59E-03
95GO:0016773: phosphotransferase activity, alcohol group as acceptor3.59E-03
96GO:0004366: glycerol-3-phosphate O-acyltransferase activity4.44E-03
97GO:0042578: phosphoric ester hydrolase activity4.44E-03
98GO:0004332: fructose-bisphosphate aldolase activity4.44E-03
99GO:0031593: polyubiquitin binding4.44E-03
100GO:0004556: alpha-amylase activity4.44E-03
101GO:0004130: cytochrome-c peroxidase activity4.44E-03
102GO:0016853: isomerase activity4.81E-03
103GO:0005261: cation channel activity5.35E-03
104GO:0004124: cysteine synthase activity5.35E-03
105GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity5.35E-03
106GO:0004849: uridine kinase activity5.35E-03
107GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity5.35E-03
108GO:0004747: ribokinase activity5.35E-03
109GO:0019899: enzyme binding6.32E-03
110GO:0051082: unfolded protein binding6.68E-03
111GO:0008865: fructokinase activity7.35E-03
112GO:0008312: 7S RNA binding7.35E-03
113GO:0004034: aldose 1-epimerase activity7.35E-03
114GO:0016597: amino acid binding7.56E-03
115GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water8.43E-03
116GO:0008135: translation factor activity, RNA binding8.43E-03
117GO:0071949: FAD binding9.58E-03
118GO:0030170: pyridoxal phosphate binding1.02E-02
119GO:0030955: potassium ion binding1.08E-02
120GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity1.08E-02
121GO:0004743: pyruvate kinase activity1.08E-02
122GO:0030234: enzyme regulator activity1.20E-02
123GO:0005089: Rho guanyl-nucleotide exchange factor activity1.33E-02
124GO:0003924: GTPase activity1.45E-02
125GO:0004565: beta-galactosidase activity1.61E-02
126GO:0004364: glutathione transferase activity1.65E-02
127GO:0004185: serine-type carboxypeptidase activity1.72E-02
128GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.75E-02
129GO:0051536: iron-sulfur cluster binding2.21E-02
130GO:0043130: ubiquitin binding2.21E-02
131GO:0004601: peroxidase activity2.34E-02
132GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.70E-02
133GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups2.84E-02
134GO:0022891: substrate-specific transmembrane transporter activity2.87E-02
135GO:0003756: protein disulfide isomerase activity3.05E-02
136GO:0005509: calcium ion binding3.12E-02
137GO:0046933: proton-transporting ATP synthase activity, rotational mechanism3.60E-02
138GO:0008080: N-acetyltransferase activity3.60E-02
139GO:0005355: glucose transmembrane transporter activity3.79E-02
140GO:0050662: coenzyme binding3.79E-02
141GO:0004252: serine-type endopeptidase activity4.58E-02
142GO:0003684: damaged DNA binding4.79E-02
143GO:0015144: carbohydrate transmembrane transporter activity4.93E-02
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Gene type



Gene DE type