co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G30200

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006642: triglyceride mobilization	0.00E+00
2	GO:0070125: mitochondrial translational elongation	0.00E+00
3	GO:0006633: fatty acid biosynthetic process	3.91E-10
4	GO:0046166: glyceraldehyde-3-phosphate biosynthetic process	2.08E-05
5	GO:0006436: tryptophanyl-tRNA aminoacylation	2.08E-05
6	GO:0006695: cholesterol biosynthetic process	5.37E-05
7	GO:0080183: response to photooxidative stress	5.37E-05
8	GO:0009411: response to UV	5.43E-05
9	GO:0019563: glycerol catabolic process	9.50E-05
10	GO:0010253: UDP-rhamnose biosynthetic process	9.50E-05
11	GO:0045793: positive regulation of cell size	9.50E-05
12	GO:0032504: multicellular organism reproduction	9.50E-05
13	GO:0051085: chaperone mediated protein folding requiring cofactor	1.42E-04
14	GO:0006241: CTP biosynthetic process	1.42E-04
15	GO:0043481: anthocyanin accumulation in tissues in response to UV light	1.42E-04
16	GO:0006165: nucleoside diphosphate phosphorylation	1.42E-04
17	GO:0006228: UTP biosynthetic process	1.42E-04
18	GO:0010088: phloem development	1.42E-04
19	GO:0055070: copper ion homeostasis	1.42E-04
20	GO:0015995: chlorophyll biosynthetic process	1.78E-04
21	GO:0006085: acetyl-CoA biosynthetic process	1.95E-04
22	GO:0006183: GTP biosynthetic process	1.95E-04
23	GO:0048359: mucilage metabolic process involved in seed coat development	2.51E-04
24	GO:0010236: plastoquinone biosynthetic process	2.51E-04
25	GO:0006555: methionine metabolic process	3.11E-04
26	GO:0042026: protein refolding	3.73E-04
27	GO:0017148: negative regulation of translation	3.73E-04
28	GO:0010189: vitamin E biosynthetic process	3.73E-04
29	GO:0010555: response to mannitol	3.73E-04
30	GO:0045995: regulation of embryonic development	4.37E-04
31	GO:0048564: photosystem I assembly	5.05E-04
32	GO:0009642: response to light intensity	5.05E-04
33	GO:0006096: glycolytic process	5.18E-04
34	GO:0045337: farnesyl diphosphate biosynthetic process	6.45E-04
35	GO:0033384: geranyl diphosphate biosynthetic process	6.45E-04
36	GO:0048589: developmental growth	6.45E-04
37	GO:0015780: nucleotide-sugar transport	6.45E-04
38	GO:0035999: tetrahydrofolate interconversion	7.18E-04
39	GO:0010192: mucilage biosynthetic process	7.94E-04
40	GO:0018119: peptidyl-cysteine S-nitrosylation	8.71E-04
41	GO:0006094: gluconeogenesis	1.03E-03
42	GO:0019253: reductive pentose-phosphate cycle	1.11E-03
43	GO:0046688: response to copper ion	1.20E-03
44	GO:0010025: wax biosynthetic process	1.29E-03
45	GO:0019344: cysteine biosynthetic process	1.38E-03
46	GO:0007010: cytoskeleton organization	1.38E-03
47	GO:0008299: isoprenoid biosynthetic process	1.47E-03
48	GO:0006418: tRNA aminoacylation for protein translation	1.47E-03
49	GO:0009658: chloroplast organization	1.58E-03
50	GO:0006730: one-carbon metabolic process	1.66E-03
51	GO:0007005: mitochondrion organization	1.66E-03
52	GO:0010214: seed coat development	1.86E-03
53	GO:0016117: carotenoid biosynthetic process	1.96E-03
54	GO:0080022: primary root development	2.07E-03
55	GO:0000413: protein peptidyl-prolyl isomerization	2.07E-03
56	GO:0019252: starch biosynthetic process	2.39E-03
57	GO:0010286: heat acclimation	2.96E-03
58	GO:0009911: positive regulation of flower development	3.21E-03
59	GO:0055114: oxidation-reduction process	3.21E-03
60	GO:0009627: systemic acquired resistance	3.45E-03
61	GO:0009817: defense response to fungus, incompatible interaction	3.84E-03
62	GO:0048481: plant ovule development	3.84E-03
63	GO:0008219: cell death	3.84E-03
64	GO:0048767: root hair elongation	3.97E-03
65	GO:0007568: aging	4.24E-03
66	GO:0006631: fatty acid metabolic process	5.07E-03
67	GO:0042542: response to hydrogen peroxide	5.22E-03
68	GO:0051707: response to other organism	5.37E-03
69	GO:0008643: carbohydrate transport	5.66E-03
70	GO:0042538: hyperosmotic salinity response	6.27E-03
71	GO:0006457: protein folding	6.48E-03
72	GO:0009585: red, far-red light phototransduction	6.59E-03
73	GO:0006414: translational elongation	7.47E-03
74	GO:0042742: defense response to bacterium	1.01E-02
75	GO:0042254: ribosome biogenesis	1.71E-02
76	GO:0048366: leaf development	1.89E-02
77	GO:0045454: cell redox homeostasis	2.23E-02
78	GO:0009793: embryo development ending in seed dormancy	2.36E-02
79	GO:0032259: methylation	2.51E-02
80	GO:0006629: lipid metabolic process	2.59E-02
81	GO:0009734: auxin-activated signaling pathway	3.31E-02
82	GO:0009735: response to cytokinin	3.66E-02

Rank	GO Term	Adjusted P value
1	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
2	GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity	0.00E+00
3	GO:0016631: enoyl-[acyl-carrier-protein] reductase activity	0.00E+00
4	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
5	GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity	0.00E+00
6	GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity	0.00E+00
7	GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity	0.00E+00
8	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	3.35E-08
9	GO:0010489: UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity	2.08E-05
10	GO:0004807: triose-phosphate isomerase activity	2.08E-05
11	GO:0010490: UDP-4-keto-rhamnose-4-keto-reductase activity	2.08E-05
12	GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity	2.08E-05
13	GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity	2.08E-05
14	GO:0004830: tryptophan-tRNA ligase activity	2.08E-05
15	GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity	2.08E-05
16	GO:0010280: UDP-L-rhamnose synthase activity	5.37E-05
17	GO:0050377: UDP-glucose 4,6-dehydratase activity	5.37E-05
18	GO:0008460: dTDP-glucose 4,6-dehydratase activity	5.37E-05
19	GO:0004148: dihydrolipoyl dehydrogenase activity	9.50E-05
20	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	9.50E-05
21	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	1.42E-04
22	GO:0003878: ATP citrate synthase activity	1.42E-04
23	GO:0004550: nucleoside diphosphate kinase activity	1.42E-04
24	GO:0016836: hydro-lyase activity	1.95E-04
25	GO:0003746: translation elongation factor activity	2.53E-04
26	GO:0051920: peroxiredoxin activity	3.73E-04
27	GO:0102391: decanoate--CoA ligase activity	3.73E-04
28	GO:0016831: carboxy-lyase activity	4.37E-04
29	GO:0004467: long-chain fatty acid-CoA ligase activity	4.37E-04
30	GO:0016209: antioxidant activity	5.05E-04
31	GO:0004337: geranyltranstransferase activity	6.45E-04
32	GO:0004161: dimethylallyltranstransferase activity	8.71E-04
33	GO:0044183: protein binding involved in protein folding	8.71E-04
34	GO:0008514: organic anion transmembrane transporter activity	1.86E-03
35	GO:0004812: aminoacyl-tRNA ligase activity	1.96E-03
36	GO:0005200: structural constituent of cytoskeleton	2.96E-03
37	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.71E-03
38	GO:0043621: protein self-association	5.66E-03
39	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	5.97E-03
40	GO:0005507: copper ion binding	7.13E-03
41	GO:0051082: unfolded protein binding	8.42E-03
42	GO:0019843: rRNA binding	9.85E-03
43	GO:0016829: lyase activity	1.04E-02
44	GO:0003729: mRNA binding	1.51E-02
45	GO:0008168: methyltransferase activity	1.64E-02
46	GO:0004601: peroxidase activity	1.68E-02
47	GO:0052689: carboxylic ester hydrolase activity	2.11E-02
48	GO:0042803: protein homodimerization activity	2.31E-02
49	GO:0016887: ATPase activity	3.54E-02

Rank	GO Term	Adjusted P value
1	GO:0005835: fatty acid synthase complex	0.00E+00
2	GO:0009570: chloroplast stroma	1.06E-17
3	GO:0009941: chloroplast envelope	1.44E-15
4	GO:0009507: chloroplast	2.36E-14
5	GO:0009579: thylakoid	4.43E-09
6	GO:0009534: chloroplast thylakoid	8.06E-05
7	GO:0009346: citrate lyase complex	1.42E-04
8	GO:0055035: plastid thylakoid membrane	2.51E-04
9	GO:0031977: thylakoid lumen	3.02E-04
10	GO:0022626: cytosolic ribosome	5.89E-04
11	GO:0000311: plastid large ribosomal subunit	9.50E-04
12	GO:0009536: plastid	1.92E-03
13	GO:0010319: stromule	2.96E-03
14	GO:0009535: chloroplast thylakoid membrane	4.10E-03
15	GO:0005856: cytoskeleton	5.81E-03
16	GO:0005739: mitochondrion	7.13E-03
17	GO:0048046: apoplast	7.58E-03
18	GO:0009706: chloroplast inner membrane	8.42E-03
19	GO:0005618: cell wall	8.46E-03
20	GO:0009543: chloroplast thylakoid lumen	9.85E-03
21	GO:0005829: cytosol	1.15E-02
22	GO:0005759: mitochondrial matrix	1.16E-02