Gene: AT2G16940
     

Gene description


TAIR ID: AT2G16940

Short description: Splicing factor, CC1-like

Pathogen responsiveness: -2.79

General responsiveness: -3.32

Orthologous


Rice:

OS10G0439600  

Maize:

GRMZM2G071589   GRMZM2G076597  

Wheat: No orthologous gene

GO biological process


unkown


GO cellular component


nucleus, cytosol


GO molecular function


unkown


Protein domain


PfamPF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
PfamPF15519, linker between RRM2 and RRM3 domains in RBM39 protein
SMARTSM00360, RRM
SMARTSM00361, RRM_1

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G18770, AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


1 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.622.92E-02






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.