gene detail

Gene description

Short description: Similar to RNA-binding region containing protein 2 (Coactivator of activating protein-1 and estrogen receptors) (Coactivator of AP-1 and ERs) (Transcription coactivator CAPER). Splice isoform 3.

Orthologous

Arabidopsis:

AT2G16940

Maize:

GRMZM2G076597

Wheat: No orthologous

GO biological process

mRNA processing (GO:0006397)

GO cellular component

nucleus (GO:0005634)

GO molecular function

nucleotide binding (GO:0000166), nucleic acid binding (GO:0003676), RNA binding (GO:0003723)

Protein domain

Pfam	PF15519, linker between RRM2 and RRM3 domains in RBM39 protein
Pfam	PF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMART	SM00360, RRM

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Coexpression network

GSE62894_S_77  view
GSE62895_S_15B_ROOT  view
GSE63047_T7174R  view
GSE62895_R_15B_ROOT  view
GSE63047_DELTAHRCV  view

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE62893	Nipponbare, Pia, water 2 d	Nipponbare, Pia, Magnaporthe oryzae P91-15B 2 d	1.56	9.29E-03
GSE62894	Nipponbare, pish, water 5 d	Nipponbare, pish, Magnaporthe oryzae Kyu77-07A 5 d	-2.58	4.69E-07