Gene: AT2G02980
Gene description
TAIR ID: AT2G02980
Short description: Pentatricopeptide repeat (PPR) superfamily protein
Pathogen responsiveness: -1.79
General responsiveness: -2.53
GO biological process
chloroplast RNA processing, RNA modification, mRNA processing
GO cellular component
mitochondrion, chloroplast
GO molecular function
endonuclease activity, zinc ion binding, RNA binding
Protein domain
| Pfam | PF13041, PPR repeat family |
| Pfam | PF14432, DYW family of nucleic acid deaminases |
| Pfam | PF01535, PPR repeat |
KEGG pathway
Not involved in KEGG pathway
Protein-protein interaction network
No Interactor
Coexpression network
Differentially expressed condition 
7 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE37269 | St0, WT, control | St0, WT, TEV 21 d | -1.51 | 1.21E-02 |
| GSE40544 | Col, WT, control | Col, WT, PstDC3000 EV | -1.57 | 5.19E-03 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | -1.90 | 7.82E-14 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | -1.88 | 1.41E-13 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | -1.55 | 1.52E-12 |
| GSE45214 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | -1.68 | 5.84E-13 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | -2.10 | 6.58E-15 |
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