Gene: AT1G78630
     

Gene description


TAIR ID: AT1G78630

Short description: Ribosomal protein L13 family protein

Pathogen responsiveness: -0.28

General responsiveness: 1.88

Orthologous


Rice:

OS01G0749200  

Maize:

GRMZM2G043212  

Wheat: No orthologous gene

GO biological process


translation, response to cytokinin, embryo development ending in seed dormancy


GO cellular component


chloroplast stroma, chloroplast envelope, ribosome, chloroplast, thylakoid


GO molecular function


structural constituent of ribosome, mRNA binding


Protein domain


PfamPF00572, Ribosomal protein L13

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT2G20180, AT5G61850, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 5

click to view PPI network

Differentially expressed condition


13 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.651.99E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-4.141.36E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.667.21E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.975.17E-10
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.081.14E-04
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-1.802.79E-07
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-1.695.91E-06
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-1.666.96E-06
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.653.01E-06
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.095.12E-09
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h-1.642.17E-05
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-1.733.38E-06
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-2.123.57E-08






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