gene detail

Gene description

TAIR ID: AT1G74880

Short description: NAD(P)H:plastoquinone dehydrogenase complex subunit O

Pathogen responsiveness: 0.14

General responsiveness: 2.68

Orthologous

Rice:

OS01G0959900

Maize:

GRMZM2G133844

Wheat: No orthologous gene

GO biological process

transport, NADH dehydrogenase complex (plastoquinone) assembly, oxidation-reduction process

GO cellular component

chloroplast thylakoid membrane, chloroplast, plasma membrane

GO molecular function

quinone binding, oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor

Protein domain

Pfam	PF11910, Cyanobacterial and plant NDH-1 subunit O

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G69490

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 4

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_EDS16_GO  view
GSE26679_EDR1_GC  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

15 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	-1.57	2.50E-08
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-3.40	1.87E-09
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a 6 h	-1.50	9.34E-05
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-1.51	2.46E-07
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.61	1.07E-10
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.99	5.91E-09
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-2.75	4.30E-11
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-1.70	1.93E-12
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-2.25	1.41E-14
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-2.72	1.44E-03
GSE5520	Col, WT, control 10 h	Col, WT, Cor- hrpS- 10 h	-2.15	4.50E-02
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-2.35	9.69E-04
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-2.46	1.48E-03
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 HrpA- 12 h	-1.58	6.53E-04
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.61	1.94E-04