GO Enrichment Analysis of Co-expressed Genes with
AT1G74880
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 2 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 3 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 4 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 5 | GO:2001294: malonyl-CoA catabolic process | 0.00E+00 |
| 6 | GO:0006098: pentose-phosphate shunt | 2.46E-05 |
| 7 | GO:0009443: pyridoxal 5'-phosphate salvage | 4.31E-05 |
| 8 | GO:0080093: regulation of photorespiration | 4.31E-05 |
| 9 | GO:0031998: regulation of fatty acid beta-oxidation | 4.31E-05 |
| 10 | GO:0051775: response to redox state | 4.31E-05 |
| 11 | GO:0009773: photosynthetic electron transport in photosystem I | 4.36E-05 |
| 12 | GO:0006108: malate metabolic process | 5.98E-05 |
| 13 | GO:0006094: gluconeogenesis | 5.98E-05 |
| 14 | GO:0071492: cellular response to UV-A | 1.84E-04 |
| 15 | GO:0006753: nucleoside phosphate metabolic process | 1.84E-04 |
| 16 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.70E-04 |
| 17 | GO:0006107: oxaloacetate metabolic process | 2.70E-04 |
| 18 | GO:0006734: NADH metabolic process | 3.64E-04 |
| 19 | GO:0071486: cellular response to high light intensity | 3.64E-04 |
| 20 | GO:0010027: thylakoid membrane organization | 3.84E-04 |
| 21 | GO:0009658: chloroplast organization | 4.55E-04 |
| 22 | GO:0006097: glyoxylate cycle | 4.63E-04 |
| 23 | GO:0006461: protein complex assembly | 4.63E-04 |
| 24 | GO:0043097: pyrimidine nucleoside salvage | 4.63E-04 |
| 25 | GO:0006206: pyrimidine nucleobase metabolic process | 5.67E-04 |
| 26 | GO:0080167: response to karrikin | 5.97E-04 |
| 27 | GO:0009853: photorespiration | 6.25E-04 |
| 28 | GO:0006099: tricarboxylic acid cycle | 6.53E-04 |
| 29 | GO:0009854: oxidative photosynthetic carbon pathway | 6.76E-04 |
| 30 | GO:0015979: photosynthesis | 7.03E-04 |
| 31 | GO:0015937: coenzyme A biosynthetic process | 7.90E-04 |
| 32 | GO:0010196: nonphotochemical quenching | 7.90E-04 |
| 33 | GO:0048564: photosystem I assembly | 9.08E-04 |
| 34 | GO:0071482: cellular response to light stimulus | 1.03E-03 |
| 35 | GO:0009657: plastid organization | 1.03E-03 |
| 36 | GO:0009821: alkaloid biosynthetic process | 1.16E-03 |
| 37 | GO:0006096: glycolytic process | 1.24E-03 |
| 38 | GO:0006810: transport | 1.53E-03 |
| 39 | GO:0009073: aromatic amino acid family biosynthetic process | 1.57E-03 |
| 40 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.57E-03 |
| 41 | GO:0046686: response to cadmium ion | 1.67E-03 |
| 42 | GO:0009735: response to cytokinin | 1.76E-03 |
| 43 | GO:0009058: biosynthetic process | 1.94E-03 |
| 44 | GO:0019253: reductive pentose-phosphate cycle | 2.03E-03 |
| 45 | GO:0006636: unsaturated fatty acid biosynthetic process | 2.36E-03 |
| 46 | GO:0006487: protein N-linked glycosylation | 2.52E-03 |
| 47 | GO:0061077: chaperone-mediated protein folding | 2.88E-03 |
| 48 | GO:0016226: iron-sulfur cluster assembly | 3.06E-03 |
| 49 | GO:0030433: ubiquitin-dependent ERAD pathway | 3.06E-03 |
| 50 | GO:0042631: cellular response to water deprivation | 3.82E-03 |
| 51 | GO:0016126: sterol biosynthetic process | 5.98E-03 |
| 52 | GO:0032259: methylation | 6.78E-03 |
| 53 | GO:0008152: metabolic process | 7.80E-03 |
| 54 | GO:0000209: protein polyubiquitination | 1.04E-02 |
| 55 | GO:0009644: response to high light intensity | 1.07E-02 |
| 56 | GO:0009611: response to wounding | 1.29E-02 |
| 57 | GO:0055085: transmembrane transport | 1.60E-02 |
| 58 | GO:0055114: oxidation-reduction process | 2.08E-02 |
| 59 | GO:0005975: carbohydrate metabolic process | 3.87E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 2 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 3 | GO:0051738: xanthophyll binding | 0.00E+00 |
| 4 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 5 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 6 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 7 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 8 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 9 | GO:0016615: malate dehydrogenase activity | 5.63E-06 |
| 10 | GO:0004332: fructose-bisphosphate aldolase activity | 5.63E-06 |
| 11 | GO:0030060: L-malate dehydrogenase activity | 8.18E-06 |
| 12 | GO:0010945: CoA pyrophosphatase activity | 4.31E-05 |
| 13 | GO:0008746: NAD(P)+ transhydrogenase activity | 4.31E-05 |
| 14 | GO:0018708: thiol S-methyltransferase activity | 1.07E-04 |
| 15 | GO:0008967: phosphoglycolate phosphatase activity | 1.07E-04 |
| 16 | GO:0022891: substrate-specific transmembrane transporter activity | 1.51E-04 |
| 17 | GO:0070402: NADPH binding | 1.84E-04 |
| 18 | GO:0032947: protein complex scaffold | 1.84E-04 |
| 19 | GO:0048038: quinone binding | 2.64E-04 |
| 20 | GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity | 2.70E-04 |
| 21 | GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | 2.70E-04 |
| 22 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 3.64E-04 |
| 23 | GO:0008453: alanine-glyoxylate transaminase activity | 3.64E-04 |
| 24 | GO:0004506: squalene monooxygenase activity | 3.64E-04 |
| 25 | GO:0016168: chlorophyll binding | 4.05E-04 |
| 26 | GO:0000210: NAD+ diphosphatase activity | 5.67E-04 |
| 27 | GO:0004849: uridine kinase activity | 6.76E-04 |
| 28 | GO:0043022: ribosome binding | 9.08E-04 |
| 29 | GO:0004033: aldo-keto reductase (NADP) activity | 9.08E-04 |
| 30 | GO:0016844: strictosidine synthase activity | 1.29E-03 |
| 31 | GO:0016491: oxidoreductase activity | 1.30E-03 |
| 32 | GO:0044183: protein binding involved in protein folding | 1.57E-03 |
| 33 | GO:0008266: poly(U) RNA binding | 2.03E-03 |
| 34 | GO:0051536: iron-sulfur cluster binding | 2.52E-03 |
| 35 | GO:0043424: protein histidine kinase binding | 2.70E-03 |
| 36 | GO:0008168: methyltransferase activity | 3.74E-03 |
| 37 | GO:0008080: N-acetyltransferase activity | 4.02E-03 |
| 38 | GO:0008375: acetylglucosaminyltransferase activity | 6.45E-03 |
| 39 | GO:0004222: metalloendopeptidase activity | 7.69E-03 |
| 40 | GO:0005198: structural molecule activity | 1.10E-02 |
| 41 | GO:0051287: NAD binding | 1.16E-02 |
| 42 | GO:0016787: hydrolase activity | 1.26E-02 |
| 43 | GO:0031625: ubiquitin protein ligase binding | 1.34E-02 |
| 44 | GO:0016788: hydrolase activity, acting on ester bonds | 3.27E-02 |
| 45 | GO:0050660: flavin adenine dinucleotide binding | 3.58E-02 |
| 46 | GO:0061630: ubiquitin protein ligase activity | 3.89E-02 |
| 47 | GO:0004871: signal transducer activity | 4.41E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042579: microbody | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.32E-15 |
| 3 | GO:0009570: chloroplast stroma | 5.19E-08 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 6.83E-08 |
| 5 | GO:0009579: thylakoid | 1.40E-07 |
| 6 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.49E-07 |
| 7 | GO:0009534: chloroplast thylakoid | 3.00E-06 |
| 8 | GO:0009523: photosystem II | 6.28E-06 |
| 9 | GO:0009941: chloroplast envelope | 1.48E-05 |
| 10 | GO:0048046: apoplast | 5.19E-05 |
| 11 | GO:0009517: PSII associated light-harvesting complex II | 3.64E-04 |
| 12 | GO:0031977: thylakoid lumen | 7.37E-04 |
| 13 | GO:0009533: chloroplast stromal thylakoid | 7.90E-04 |
| 14 | GO:0010287: plastoglobule | 1.75E-03 |
| 15 | GO:0030095: chloroplast photosystem II | 2.03E-03 |
| 16 | GO:0005777: peroxisome | 2.34E-03 |
| 17 | GO:0042651: thylakoid membrane | 2.70E-03 |
| 18 | GO:0005778: peroxisomal membrane | 5.52E-03 |
| 19 | GO:0010319: stromule | 5.52E-03 |
| 20 | GO:0016021: integral component of membrane | 7.79E-03 |
| 21 | GO:0009706: chloroplast inner membrane | 1.60E-02 |
| 22 | GO:0009543: chloroplast thylakoid lumen | 1.88E-02 |
| 23 | GO:0046658: anchored component of plasma membrane | 2.88E-02 |
| 24 | GO:0031969: chloroplast membrane | 3.76E-02 |