gene detail

Gene description

TAIR ID: AT1G73530

Short description: RNA-binding (RRM/RBD/RNP motifs) family protein

Pathogen responsiveness: -1.36

General responsiveness: 0.95

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

mRNA processing, chloroplast mRNA modification, cytidine to uridine editing

GO cellular component

chloroplast

GO molecular function

RNA binding, protein binding

Protein domain

Pfam	PF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMART	SM00361, RRM_1
SMART	SM00360, RRM

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT2G20180, AT4G36990

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-1.69	1.39E-11
GSE56094	Col, WT, control 4 h	Col, WT, PstDC3000 4 h	1.61	5.99E-07
GSE56094	Col, WT, control 5 h	Col, WT, PstDC3000 5 h	1.53	3.22E-06
GSE56094	Col, WT, control 6 h	Col, WT, PstDC3000 6 h	1.71	6.56E-08
GSE56094	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	1.59	3.71E-07