co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G73530

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
2	GO:0015995: chlorophyll biosynthetic process	9.52E-07
3	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.09E-05
4	GO:0000476: maturation of 4.5S rRNA	6.42E-05
5	GO:0000967: rRNA 5'-end processing	6.42E-05
6	GO:0034337: RNA folding	6.42E-05
7	GO:0042254: ribosome biogenesis	9.85E-05
8	GO:0010207: photosystem II assembly	1.23E-04
9	GO:0010270: photosystem II oxygen evolving complex assembly	1.55E-04
10	GO:0034470: ncRNA processing	1.55E-04
11	GO:0006418: tRNA aminoacylation for protein translation	1.95E-04
12	GO:0006020: inositol metabolic process	3.82E-04
13	GO:0071484: cellular response to light intensity	3.82E-04
14	GO:0051085: chaperone mediated protein folding requiring cofactor	3.82E-04
15	GO:0006021: inositol biosynthetic process	5.10E-04
16	GO:0007094: mitotic spindle assembly checkpoint	6.45E-04
17	GO:0010190: cytochrome b6f complex assembly	7.90E-04
18	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	7.90E-04
19	GO:0006828: manganese ion transport	7.90E-04
20	GO:0046855: inositol phosphate dephosphorylation	7.90E-04
21	GO:0042026: protein refolding	9.40E-04
22	GO:1901259: chloroplast rRNA processing	9.40E-04
23	GO:0006353: DNA-templated transcription, termination	1.26E-03
24	GO:0015979: photosynthesis	1.33E-03
25	GO:0032544: plastid translation	1.44E-03
26	GO:0010206: photosystem II repair	1.62E-03
27	GO:0006783: heme biosynthetic process	1.62E-03
28	GO:0006412: translation	1.86E-03
29	GO:0006782: protoporphyrinogen IX biosynthetic process	2.01E-03
30	GO:0006816: calcium ion transport	2.21E-03
31	GO:0006415: translational termination	2.21E-03
32	GO:0006790: sulfur compound metabolic process	2.42E-03
33	GO:0046854: phosphatidylinositol phosphorylation	3.09E-03
34	GO:0051017: actin filament bundle assembly	3.57E-03
35	GO:0000027: ribosomal large subunit assembly	3.57E-03
36	GO:0009768: photosynthesis, light harvesting in photosystem I	3.82E-03
37	GO:0006633: fatty acid biosynthetic process	3.82E-03
38	GO:0051321: meiotic cell cycle	4.08E-03
39	GO:0016114: terpenoid biosynthetic process	4.08E-03
40	GO:0061077: chaperone-mediated protein folding	4.08E-03
41	GO:0016226: iron-sulfur cluster assembly	4.34E-03
42	GO:0007005: mitochondrion organization	4.34E-03
43	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	4.60E-03
44	GO:0006457: protein folding	5.25E-03
45	GO:0007059: chromosome segregation	6.01E-03
46	GO:0009828: plant-type cell wall loosening	7.55E-03
47	GO:0010027: thylakoid membrane organization	8.54E-03
48	GO:0009627: systemic acquired resistance	9.22E-03
49	GO:0048481: plant ovule development	1.03E-02
50	GO:0008219: cell death	1.03E-02
51	GO:0032259: methylation	1.14E-02
52	GO:0009664: plant-type cell wall organization	1.71E-02
53	GO:0042538: hyperosmotic salinity response	1.71E-02
54	GO:0006364: rRNA processing	1.80E-02
55	GO:0009735: response to cytokinin	1.93E-02
56	GO:0006096: glycolytic process	2.02E-02
57	GO:0006396: RNA processing	2.36E-02
58	GO:0040008: regulation of growth	3.30E-02
59	GO:0009826: unidimensional cell growth	4.52E-02
60	GO:0009658: chloroplast organization	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity	0.00E+00
2	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
3	GO:0016631: enoyl-[acyl-carrier-protein] reductase activity	0.00E+00
4	GO:0090711: FMN hydrolase activity	0.00E+00
5	GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity	0.00E+00
6	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
7	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
8	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
9	GO:0019843: rRNA binding	2.12E-08
10	GO:0005528: FK506 binding	3.50E-06
11	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.99E-06
12	GO:0004853: uroporphyrinogen decarboxylase activity	6.42E-05
13	GO:0016630: protochlorophyllide reductase activity	1.55E-04
14	GO:0052832: inositol monophosphate 3-phosphatase activity	1.55E-04
15	GO:0008934: inositol monophosphate 1-phosphatase activity	1.55E-04
16	GO:0052833: inositol monophosphate 4-phosphatase activity	1.55E-04
17	GO:0008967: phosphoglycolate phosphatase activity	1.55E-04
18	GO:0002161: aminoacyl-tRNA editing activity	2.63E-04
19	GO:0003735: structural constituent of ribosome	2.69E-04
20	GO:0004812: aminoacyl-tRNA ligase activity	3.07E-04
21	GO:0016149: translation release factor activity, codon specific	3.82E-04
22	GO:0019201: nucleotide kinase activity	3.82E-04
23	GO:0016851: magnesium chelatase activity	3.82E-04
24	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	5.10E-04
25	GO:0003959: NADPH dehydrogenase activity	6.45E-04
26	GO:0004017: adenylate kinase activity	9.40E-04
27	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	9.40E-04
28	GO:0004525: ribonuclease III activity	1.26E-03
29	GO:0003747: translation release factor activity	1.62E-03
30	GO:0005384: manganese ion transmembrane transporter activity	1.81E-03
31	GO:0044183: protein binding involved in protein folding	2.21E-03
32	GO:0047372: acylglycerol lipase activity	2.21E-03
33	GO:0000049: tRNA binding	2.42E-03
34	GO:0051082: unfolded protein binding	2.45E-03
35	GO:0015095: magnesium ion transmembrane transporter activity	2.64E-03
36	GO:0031072: heat shock protein binding	2.64E-03
37	GO:0016491: oxidoreductase activity	2.87E-03
38	GO:0008266: poly(U) RNA binding	2.87E-03
39	GO:0031409: pigment binding	3.33E-03
40	GO:0051536: iron-sulfur cluster binding	3.57E-03
41	GO:0008168: methyltransferase activity	6.24E-03
42	GO:0051015: actin filament binding	7.24E-03
43	GO:0008237: metallopeptidase activity	7.88E-03
44	GO:0016168: chlorophyll binding	8.88E-03
45	GO:0004222: metalloendopeptidase activity	1.10E-02
46	GO:0003993: acid phosphatase activity	1.25E-02
47	GO:0043621: protein self-association	1.54E-02
48	GO:0005524: ATP binding	1.83E-02
49	GO:0005507: copper ion binding	3.01E-02
50	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.04E-02

Rank	GO Term	Adjusted P value
1	GO:0009571: proplastid stroma	0.00E+00
2	GO:0005835: fatty acid synthase complex	0.00E+00
3	GO:0009507: chloroplast	4.08E-24
4	GO:0009570: chloroplast stroma	1.51E-14
5	GO:0009535: chloroplast thylakoid membrane	6.26E-13
6	GO:0009941: chloroplast envelope	1.11E-09
7	GO:0009543: chloroplast thylakoid lumen	8.20E-07
8	GO:0009579: thylakoid	1.33E-05
9	GO:0009534: chloroplast thylakoid	1.36E-05
10	GO:0005840: ribosome	6.03E-05
11	GO:0009547: plastid ribosome	6.42E-05
12	GO:0031977: thylakoid lumen	8.75E-05
13	GO:0010007: magnesium chelatase complex	2.63E-04
14	GO:0005828: kinetochore microtubule	5.10E-04
15	GO:0000776: kinetochore	6.45E-04
16	GO:0000777: condensed chromosome kinetochore	9.40E-04
17	GO:0031969: chloroplast membrane	1.13E-03
18	GO:0005876: spindle microtubule	1.81E-03
19	GO:0000311: plastid large ribosomal subunit	2.42E-03
20	GO:0032040: small-subunit processome	2.42E-03
21	GO:0030095: chloroplast photosystem II	2.87E-03
22	GO:0030076: light-harvesting complex	3.09E-03
23	GO:0022626: cytosolic ribosome	3.58E-03
24	GO:0015935: small ribosomal subunit	4.08E-03
25	GO:0015629: actin cytoskeleton	4.60E-03
26	GO:0010319: stromule	7.88E-03
27	GO:0009536: plastid	1.20E-02
28	GO:0016020: membrane	1.35E-02
29	GO:0005856: cytoskeleton	1.58E-02
30	GO:0010287: plastoglobule	2.61E-02
31	GO:0009524: phragmoplast	2.81E-02
32	GO:0046658: anchored component of plasma membrane	4.16E-02
33	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	4.96E-02