gene detail

Gene description

TAIR ID: AT1G72180

Short description: Leucine-rich receptor-like protein kinase family protein

Pathogen responsiveness: -0.37

General responsiveness: -0.04

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G167253

Wheat: No orthologous gene

GO biological process

protein phosphorylation, nitrate import, response to osmotic stress, response to mannitol, response to nitrate starvation, regulation of root development, regulation of shoot system development, transmembrane receptor protein tyrosine kinase signaling pathway

GO cellular component

plasma membrane, integral component of membrane

GO molecular function

peptide receptor activity, transmembrane receptor protein tyrosine kinase activity, kinase activity, protein serine/threonine kinase activity, protein binding, ATP binding, peptide hormone binding, peptide binding

Protein domain

Pfam	PF08263, Leucine rich repeat N-terminal domain
Pfam	PF00560, Leucine Rich Repeat
Pfam	PF00069, Protein kinase domain
Pfam	PF13855, Leucine rich repeat
SMART	SM00220, S_TKc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 22 (Top10%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

17 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17382	Col, WT, Flg22 0 min	Col, WT, Flg22 60min	-1.55	4.56E-02
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 1 h	-2.04	8.92E-03
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 2 h	-2.66	7.54E-04
GSE17464	Laer, control	Laer, Flg22 2 h	-1.75	1.10E-02
GSE17464	Penta, control	Penta, Flg22 2 h	-1.93	5.85E-03
GSE17464	Penta, control	Penta, Flg22 2 h	-2.32	7.67E-04
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.59	1.07E-05
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.86	4.35E-03
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.77	3.91E-03
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-2.11	1.33E-12
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.62	8.24E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.20	8.76E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-2.10	2.00E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-2.74	3.62E-14
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.82	5.60E-04
GSE56094	Col, WT, control 4 h	Col, WT, PstDC3000 4 h	-2.00	1.19E-10
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-2.18	2.74E-03