co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G72180

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000455: enzyme-directed rRNA pseudouridine synthesis	0.00E+00
2	GO:0071000: response to magnetism	0.00E+00
3	GO:0000372: Group I intron splicing	0.00E+00
4	GO:0033528: S-methylmethionine cycle	0.00E+00
5	GO:1905177: tracheary element differentiation	0.00E+00
6	GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
7	GO:0009583: detection of light stimulus	0.00E+00
8	GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
9	GO:0000105: histidine biosynthetic process	1.45E-04
10	GO:0032544: plastid translation	1.81E-04
11	GO:0000012: single strand break repair	1.84E-04
12	GO:0043266: regulation of potassium ion transport	1.84E-04
13	GO:0072387: flavin adenine dinucleotide metabolic process	1.84E-04
14	GO:2000021: regulation of ion homeostasis	1.84E-04
15	GO:0070574: cadmium ion transmembrane transport	1.84E-04
16	GO:0000066: mitochondrial ornithine transport	1.84E-04
17	GO:0034757: negative regulation of iron ion transport	1.84E-04
18	GO:0006419: alanyl-tRNA aminoacylation	1.84E-04
19	GO:0000373: Group II intron splicing	2.21E-04
20	GO:1900871: chloroplast mRNA modification	4.15E-04
21	GO:0010617: circadian regulation of calcium ion oscillation	4.15E-04
22	GO:0010271: regulation of chlorophyll catabolic process	4.15E-04
23	GO:0006432: phenylalanyl-tRNA aminoacylation	4.15E-04
24	GO:0099402: plant organ development	4.15E-04
25	GO:0006420: arginyl-tRNA aminoacylation	4.15E-04
26	GO:0010343: singlet oxygen-mediated programmed cell death	4.15E-04
27	GO:1901529: positive regulation of anion channel activity	4.15E-04
28	GO:1901672: positive regulation of systemic acquired resistance	6.76E-04
29	GO:0080117: secondary growth	6.76E-04
30	GO:0010623: programmed cell death involved in cell development	6.76E-04
31	GO:0031022: nuclear migration along microfilament	6.76E-04
32	GO:1902448: positive regulation of shade avoidance	6.76E-04
33	GO:0005992: trehalose biosynthetic process	7.29E-04
34	GO:0009800: cinnamic acid biosynthetic process	9.65E-04
35	GO:1901332: negative regulation of lateral root development	9.65E-04
36	GO:0090308: regulation of methylation-dependent chromatin silencing	9.65E-04
37	GO:0051639: actin filament network formation	9.65E-04
38	GO:0010239: chloroplast mRNA processing	9.65E-04
39	GO:0010508: positive regulation of autophagy	1.28E-03
40	GO:0008295: spermidine biosynthetic process	1.28E-03
41	GO:0006021: inositol biosynthetic process	1.28E-03
42	GO:1902347: response to strigolactone	1.28E-03
43	GO:0051764: actin crosslink formation	1.28E-03
44	GO:0048442: sepal development	1.28E-03
45	GO:0051322: anaphase	1.28E-03
46	GO:0006661: phosphatidylinositol biosynthetic process	1.28E-03
47	GO:0045489: pectin biosynthetic process	1.41E-03
48	GO:0007018: microtubule-based movement	1.52E-03
49	GO:0080110: sporopollenin biosynthetic process	1.63E-03
50	GO:0010117: photoprotection	1.63E-03
51	GO:0046283: anthocyanin-containing compound metabolic process	1.63E-03
52	GO:0009904: chloroplast accumulation movement	1.63E-03
53	GO:0016123: xanthophyll biosynthetic process	1.63E-03
54	GO:1901371: regulation of leaf morphogenesis	2.01E-03
55	GO:0006559: L-phenylalanine catabolic process	2.01E-03
56	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	2.01E-03
57	GO:0060918: auxin transport	2.01E-03
58	GO:0048831: regulation of shoot system development	2.01E-03
59	GO:0010076: maintenance of floral meristem identity	2.41E-03
60	GO:0048509: regulation of meristem development	2.41E-03
61	GO:0009903: chloroplast avoidance movement	2.41E-03
62	GO:0010310: regulation of hydrogen peroxide metabolic process	2.41E-03
63	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	2.41E-03
64	GO:0006400: tRNA modification	2.83E-03
65	GO:0051510: regulation of unidimensional cell growth	2.83E-03
66	GO:0070413: trehalose metabolism in response to stress	3.28E-03
67	GO:0006875: cellular metal ion homeostasis	3.28E-03
68	GO:0048564: photosystem I assembly	3.28E-03
69	GO:0071482: cellular response to light stimulus	3.75E-03
70	GO:0009827: plant-type cell wall modification	3.75E-03
71	GO:0008202: steroid metabolic process	4.76E-03
72	GO:1900426: positive regulation of defense response to bacterium	4.76E-03
73	GO:0009638: phototropism	4.76E-03
74	GO:0010018: far-red light signaling pathway	4.76E-03
75	GO:0009086: methionine biosynthetic process	4.76E-03
76	GO:0048441: petal development	5.30E-03
77	GO:0006535: cysteine biosynthetic process from serine	5.30E-03
78	GO:0006259: DNA metabolic process	5.30E-03
79	GO:0031627: telomeric loop formation	5.30E-03
80	GO:0006265: DNA topological change	5.85E-03
81	GO:0010216: maintenance of DNA methylation	5.85E-03
82	GO:0009636: response to toxic substance	5.95E-03
83	GO:0006790: sulfur compound metabolic process	6.43E-03
84	GO:0009793: embryo development ending in seed dormancy	6.66E-03
85	GO:0009785: blue light signaling pathway	7.03E-03
86	GO:0010075: regulation of meristem growth	7.03E-03
87	GO:0006364: rRNA processing	7.14E-03
88	GO:0010207: photosystem II assembly	7.64E-03
89	GO:0006302: double-strand break repair	7.64E-03
90	GO:0048440: carpel development	7.64E-03
91	GO:0046854: phosphatidylinositol phosphorylation	8.27E-03
92	GO:0048316: seed development	8.72E-03
93	GO:0042753: positive regulation of circadian rhythm	8.93E-03
94	GO:0030150: protein import into mitochondrial matrix	9.60E-03
95	GO:0051017: actin filament bundle assembly	9.60E-03
96	GO:0006289: nucleotide-excision repair	9.60E-03
97	GO:2000377: regulation of reactive oxygen species metabolic process	9.60E-03
98	GO:0019344: cysteine biosynthetic process	9.60E-03
99	GO:0015992: proton transport	1.10E-02
100	GO:0031348: negative regulation of defense response	1.17E-02
101	GO:0071215: cellular response to abscisic acid stimulus	1.25E-02
102	GO:0010089: xylem development	1.32E-02
103	GO:0010584: pollen exine formation	1.32E-02
104	GO:0048443: stamen development	1.32E-02
105	GO:0070417: cellular response to cold	1.40E-02
106	GO:0016117: carotenoid biosynthetic process	1.40E-02
107	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.40E-02
108	GO:0010087: phloem or xylem histogenesis	1.48E-02
109	GO:0010118: stomatal movement	1.48E-02
110	GO:0046323: glucose import	1.56E-02
111	GO:0010268: brassinosteroid homeostasis	1.56E-02
112	GO:0042752: regulation of circadian rhythm	1.64E-02
113	GO:0007059: chromosome segregation	1.64E-02
114	GO:0009646: response to absence of light	1.64E-02
115	GO:0008654: phospholipid biosynthetic process	1.73E-02
116	GO:0055072: iron ion homeostasis	1.73E-02
117	GO:0016132: brassinosteroid biosynthetic process	1.81E-02
118	GO:0009451: RNA modification	1.81E-02
119	GO:0007264: small GTPase mediated signal transduction	1.90E-02
120	GO:0007166: cell surface receptor signaling pathway	2.02E-02
121	GO:0009639: response to red or far red light	2.07E-02
122	GO:0016125: sterol metabolic process	2.07E-02
123	GO:0000910: cytokinesis	2.26E-02
124	GO:0009416: response to light stimulus	2.35E-02
125	GO:0010029: regulation of seed germination	2.45E-02
126	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.45E-02
127	GO:0048573: photoperiodism, flowering	2.64E-02
128	GO:0030244: cellulose biosynthetic process	2.84E-02
129	GO:0018298: protein-chromophore linkage	2.84E-02
130	GO:0000160: phosphorelay signal transduction system	2.94E-02
131	GO:0010218: response to far red light	3.05E-02
132	GO:0009834: plant-type secondary cell wall biogenesis	3.05E-02
133	GO:0045087: innate immune response	3.36E-02
134	GO:0009637: response to blue light	3.36E-02
135	GO:0030001: metal ion transport	3.69E-02
136	GO:0006839: mitochondrial transport	3.69E-02
137	GO:0009640: photomorphogenesis	4.03E-02
138	GO:0010114: response to red light	4.03E-02
139	GO:0042546: cell wall biogenesis	4.14E-02
140	GO:0009644: response to high light intensity	4.26E-02
141	GO:0009965: leaf morphogenesis	4.38E-02
142	GO:0000165: MAPK cascade	4.61E-02
143	GO:0042538: hyperosmotic salinity response	4.73E-02
144	GO:0032259: methylation	4.77E-02
145	GO:0009585: red, far-red light phototransduction	4.98E-02
146	GO:0009736: cytokinin-activated signaling pathway	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0004401: histidinol-phosphatase activity	0.00E+00
2	GO:0019144: ADP-sugar diphosphatase activity	0.00E+00
3	GO:0052834: inositol monophosphate phosphatase activity	0.00E+00
4	GO:0017005: 3'-tyrosyl-DNA phosphodiesterase activity	0.00E+00
5	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	1.84E-04
6	GO:0003879: ATP phosphoribosyltransferase activity	1.84E-04
7	GO:0010347: L-galactose-1-phosphate phosphatase activity	1.84E-04
8	GO:0004451: isocitrate lyase activity	1.84E-04
9	GO:0080042: ADP-glucose pyrophosphohydrolase activity	1.84E-04
10	GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity	1.84E-04
11	GO:0004813: alanine-tRNA ligase activity	1.84E-04
12	GO:0005290: L-histidine transmembrane transporter activity	1.84E-04
13	GO:0004805: trehalose-phosphatase activity	3.10E-04
14	GO:0000049: tRNA binding	4.14E-04
15	GO:0000064: L-ornithine transmembrane transporter activity	4.15E-04
16	GO:0004826: phenylalanine-tRNA ligase activity	4.15E-04
17	GO:0050736: O-malonyltransferase activity	4.15E-04
18	GO:0009884: cytokinin receptor activity	4.15E-04
19	GO:0048531: beta-1,3-galactosyltransferase activity	4.15E-04
20	GO:0050017: L-3-cyanoalanine synthase activity	4.15E-04
21	GO:0080041: ADP-ribose pyrophosphohydrolase activity	4.15E-04
22	GO:0004814: arginine-tRNA ligase activity	4.15E-04
23	GO:0008898: S-adenosylmethionine-homocysteine S-methyltransferase activity	4.15E-04
24	GO:0004766: spermidine synthase activity	4.15E-04
25	GO:0052832: inositol monophosphate 3-phosphatase activity	4.15E-04
26	GO:0008934: inositol monophosphate 1-phosphatase activity	4.15E-04
27	GO:0052833: inositol monophosphate 4-phosphatase activity	4.15E-04
28	GO:0004148: dihydrolipoyl dehydrogenase activity	6.76E-04
29	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	6.76E-04
30	GO:0005034: osmosensor activity	6.76E-04
31	GO:0045548: phenylalanine ammonia-lyase activity	6.76E-04
32	GO:0015181: arginine transmembrane transporter activity	9.65E-04
33	GO:0009678: hydrogen-translocating pyrophosphatase activity	9.65E-04
34	GO:0015086: cadmium ion transmembrane transporter activity	9.65E-04
35	GO:0009882: blue light photoreceptor activity	9.65E-04
36	GO:0015189: L-lysine transmembrane transporter activity	9.65E-04
37	GO:0005354: galactose transmembrane transporter activity	9.65E-04
38	GO:0003690: double-stranded DNA binding	1.02E-03
39	GO:0070628: proteasome binding	1.28E-03
40	GO:0052793: pectin acetylesterase activity	1.28E-03
41	GO:0031593: polyubiquitin binding	2.01E-03
42	GO:0004462: lactoylglutathione lyase activity	2.01E-03
43	GO:0004656: procollagen-proline 4-dioxygenase activity	2.41E-03
44	GO:0019900: kinase binding	2.41E-03
45	GO:0004124: cysteine synthase activity	2.41E-03
46	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.41E-03
47	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.77E-03
48	GO:0015103: inorganic anion transmembrane transporter activity	2.83E-03
49	GO:0004427: inorganic diphosphatase activity	2.83E-03
50	GO:0043022: ribosome binding	3.28E-03
51	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	3.75E-03
52	GO:0008142: oxysterol binding	3.75E-03
53	GO:0071949: FAD binding	4.25E-03
54	GO:0004673: protein histidine kinase activity	5.30E-03
55	GO:0003691: double-stranded telomeric DNA binding	5.85E-03
56	GO:0015266: protein channel activity	7.03E-03
57	GO:0008081: phosphoric diester hydrolase activity	7.03E-03
58	GO:0000155: phosphorelay sensor kinase activity	7.03E-03
59	GO:0009982: pseudouridine synthase activity	7.03E-03
60	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	7.64E-03
61	GO:0003777: microtubule motor activity	7.91E-03
62	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	8.93E-03
63	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	8.93E-03
64	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	8.93E-03
65	GO:0031418: L-ascorbic acid binding	9.60E-03
66	GO:0043130: ubiquitin binding	9.60E-03
67	GO:0043424: protein histidine kinase binding	1.03E-02
68	GO:0003924: GTPase activity	1.14E-02
69	GO:0003723: RNA binding	1.15E-02
70	GO:0015144: carbohydrate transmembrane transporter activity	1.53E-02
71	GO:0004527: exonuclease activity	1.56E-02
72	GO:0046873: metal ion transmembrane transporter activity	1.56E-02
73	GO:0008536: Ran GTPase binding	1.56E-02
74	GO:0010181: FMN binding	1.64E-02
75	GO:0005355: glucose transmembrane transporter activity	1.64E-02
76	GO:0050662: coenzyme binding	1.64E-02
77	GO:0005351: sugar:proton symporter activity	1.72E-02
78	GO:0019901: protein kinase binding	1.73E-02
79	GO:0048038: quinone binding	1.81E-02
80	GO:0008017: microtubule binding	1.85E-02
81	GO:0004518: nuclease activity	1.90E-02
82	GO:0051015: actin filament binding	1.99E-02
83	GO:0016791: phosphatase activity	2.07E-02
84	GO:0003684: damaged DNA binding	2.07E-02
85	GO:0042802: identical protein binding	2.24E-02
86	GO:0016597: amino acid binding	2.26E-02
87	GO:0016413: O-acetyltransferase activity	2.26E-02
88	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.84E-02
89	GO:0016740: transferase activity	3.01E-02
90	GO:0050897: cobalt ion binding	3.15E-02
91	GO:0003697: single-stranded DNA binding	3.36E-02
92	GO:0005525: GTP binding	4.35E-02

Rank	GO Term	Adjusted P value
1	GO:0009537: proplastid	0.00E+00
2	GO:0009507: chloroplast	5.01E-05
3	GO:0009501: amyloplast	1.45E-04
4	GO:0009513: etioplast	4.15E-04
5	GO:0009509: chromoplast	6.76E-04
6	GO:0016605: PML body	6.76E-04
7	GO:0032432: actin filament bundle	9.65E-04
8	GO:0005871: kinesin complex	1.22E-03
9	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	1.28E-03
10	GO:0031305: integral component of mitochondrial inner membrane	3.28E-03
11	GO:0000783: nuclear telomere cap complex	3.75E-03
12	GO:0005720: nuclear heterochromatin	4.25E-03
13	GO:0016604: nuclear body	4.76E-03
14	GO:0005884: actin filament	5.85E-03
15	GO:0009574: preprophase band	7.03E-03
16	GO:0009532: plastid stroma	1.10E-02
17	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.32E-02
18	GO:0005759: mitochondrial matrix	1.61E-02
19	GO:0009570: chloroplast stroma	1.97E-02
20	GO:0009295: nucleoid	2.17E-02
21	GO:0009536: plastid	2.29E-02
22	GO:0030529: intracellular ribonucleoprotein complex	2.35E-02
23	GO:0005874: microtubule	3.27E-02
24	GO:0005856: cytoskeleton	4.38E-02
25	GO:0005768: endosome	4.92E-02