Gene: AT1G66580
     


Gene description


TAIR ID: AT1G66580

Short description: senescence associated gene 24

Pathogen responsiveness: -0.28

General responsiveness: -1.23

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G087233  

Wheat: No orthologous gene

GO biological process


translation, response to UV-B, developmental process, ribosomal large subunit assembly


GO cellular component


cytosolic ribosome, cytoplasm, cytosolic large ribosomal subunit, vacuole, vacuolar membrane, nucleus, ribosome


GO molecular function


structural constituent of ribosome, RNA binding


Protein domain


PfamPF00252, Ribosomal protein L16p/L10e

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT3G14230, AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


17 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h1.598.13E-09
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h1.683.51E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h2.841.91E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.773.32E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h3.498.77E-14
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.564.35E-08
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.151.66E-10
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h1.575.38E-08
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h1.624.75E-06
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h2.863.13E-13
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h1.921.23E-06
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h2.046.90E-08
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h2.194.27E-08
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h1.723.90E-06
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h2.516.51E-11
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h2.257.39E-09
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h1.646.14E-03






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