Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G66580

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1900409: positive regulation of cellular response to oxidative stress0.00E+00
2GO:0072722: response to amitrole0.00E+00
3GO:0034050: host programmed cell death induced by symbiont0.00E+00
4GO:0042430: indole-containing compound metabolic process0.00E+00
5GO:0070212: protein poly-ADP-ribosylation0.00E+00
6GO:0030149: sphingolipid catabolic process0.00E+00
7GO:0009617: response to bacterium2.92E-10
8GO:0009627: systemic acquired resistance1.76E-06
9GO:0009626: plant-type hypersensitive response2.19E-06
10GO:0006032: chitin catabolic process1.69E-05
11GO:0046686: response to cadmium ion4.11E-05
12GO:0034976: response to endoplasmic reticulum stress5.94E-05
13GO:0006099: tricarboxylic acid cycle9.20E-05
14GO:0045454: cell redox homeostasis1.31E-04
15GO:0051707: response to other organism1.34E-04
16GO:0009651: response to salt stress1.58E-04
17GO:0042742: defense response to bacterium2.15E-04
18GO:0031540: regulation of anthocyanin biosynthetic process2.22E-04
19GO:0034975: protein folding in endoplasmic reticulum2.43E-04
20GO:0015760: glucose-6-phosphate transport2.43E-04
21GO:0009609: response to symbiotic bacterium2.43E-04
22GO:0055081: anion homeostasis2.43E-04
23GO:0033306: phytol metabolic process2.43E-04
24GO:0010230: alternative respiration2.43E-04
25GO:0032491: detection of molecule of fungal origin2.43E-04
26GO:0010204: defense response signaling pathway, resistance gene-independent2.74E-04
27GO:0030163: protein catabolic process3.11E-04
28GO:0009615: response to virus4.26E-04
29GO:0009870: defense response signaling pathway, resistance gene-dependent4.61E-04
30GO:0009073: aromatic amino acid family biosynthetic process5.33E-04
31GO:0000272: polysaccharide catabolic process5.33E-04
32GO:0045901: positive regulation of translational elongation5.39E-04
33GO:0006123: mitochondrial electron transport, cytochrome c to oxygen5.39E-04
34GO:0080151: positive regulation of salicylic acid mediated signaling pathway5.39E-04
35GO:0006452: translational frameshifting5.39E-04
36GO:0019752: carboxylic acid metabolic process5.39E-04
37GO:0002240: response to molecule of oomycetes origin5.39E-04
38GO:0051788: response to misfolded protein5.39E-04
39GO:0044419: interspecies interaction between organisms5.39E-04
40GO:0031349: positive regulation of defense response5.39E-04
41GO:0015712: hexose phosphate transport5.39E-04
42GO:0045905: positive regulation of translational termination5.39E-04
43GO:0006890: retrograde vesicle-mediated transport, Golgi to ER6.09E-04
44GO:0002237: response to molecule of bacterial origin7.77E-04
45GO:0006979: response to oxidative stress8.33E-04
46GO:0070588: calcium ion transmembrane transport8.68E-04
47GO:0010272: response to silver ion8.75E-04
48GO:0015714: phosphoenolpyruvate transport8.75E-04
49GO:0010581: regulation of starch biosynthetic process8.75E-04
50GO:1900140: regulation of seedling development8.75E-04
51GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway8.75E-04
52GO:0035436: triose phosphate transmembrane transport8.75E-04
53GO:0019438: aromatic compound biosynthetic process1.25E-03
54GO:0048194: Golgi vesicle budding1.25E-03
55GO:0009647: skotomorphogenesis1.25E-03
56GO:0043207: response to external biotic stimulus1.25E-03
57GO:0009855: determination of bilateral symmetry1.25E-03
58GO:0001676: long-chain fatty acid metabolic process1.25E-03
59GO:0046836: glycolipid transport1.25E-03
60GO:0016998: cell wall macromolecule catabolic process1.28E-03
61GO:0071456: cellular response to hypoxia1.40E-03
62GO:0009737: response to abscisic acid1.40E-03
63GO:0010109: regulation of photosynthesis1.67E-03
64GO:0060548: negative regulation of cell death1.67E-03
65GO:0045727: positive regulation of translation1.67E-03
66GO:0042273: ribosomal large subunit biogenesis1.67E-03
67GO:0006621: protein retention in ER lumen1.67E-03
68GO:0015713: phosphoglycerate transport1.67E-03
69GO:0006468: protein phosphorylation2.08E-03
70GO:0010197: polar nucleus fusion2.09E-03
71GO:0009697: salicylic acid biosynthetic process2.13E-03
72GO:0034052: positive regulation of plant-type hypersensitive response2.13E-03
73GO:0006564: L-serine biosynthetic process2.13E-03
74GO:0045487: gibberellin catabolic process2.13E-03
75GO:0031365: N-terminal protein amino acid modification2.13E-03
76GO:0015986: ATP synthesis coupled proton transport2.24E-03
77GO:0009749: response to glucose2.40E-03
78GO:0080167: response to karrikin2.47E-03
79GO:0000302: response to reactive oxygen species2.57E-03
80GO:0006891: intra-Golgi vesicle-mediated transport2.57E-03
81GO:0010193: response to ozone2.57E-03
82GO:0010200: response to chitin2.60E-03
83GO:0043248: proteasome assembly2.62E-03
84GO:0009117: nucleotide metabolic process2.62E-03
85GO:0018258: protein O-linked glycosylation via hydroxyproline2.62E-03
86GO:0009228: thiamine biosynthetic process2.62E-03
87GO:0002238: response to molecule of fungal origin2.62E-03
88GO:0009643: photosynthetic acclimation2.62E-03
89GO:0010405: arabinogalactan protein metabolic process2.62E-03
90GO:0010555: response to mannitol3.15E-03
91GO:2000067: regulation of root morphogenesis3.15E-03
92GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response3.15E-03
93GO:0009094: L-phenylalanine biosynthetic process3.15E-03
94GO:0009423: chorismate biosynthetic process3.15E-03
95GO:0009610: response to symbiotic fungus3.72E-03
96GO:0048528: post-embryonic root development3.72E-03
97GO:1900056: negative regulation of leaf senescence3.72E-03
98GO:0080186: developmental vegetative growth3.72E-03
99GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c3.72E-03
100GO:0006102: isocitrate metabolic process4.31E-03
101GO:0009787: regulation of abscisic acid-activated signaling pathway4.31E-03
102GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline4.31E-03
103GO:0050821: protein stabilization4.31E-03
104GO:0006457: protein folding4.38E-03
105GO:0009408: response to heat4.47E-03
106GO:0015031: protein transport4.55E-03
107GO:0008219: cell death4.83E-03
108GO:0009699: phenylpropanoid biosynthetic process4.93E-03
109GO:0022900: electron transport chain4.93E-03
110GO:0010262: somatic embryogenesis4.93E-03
111GO:0007186: G-protein coupled receptor signaling pathway4.93E-03
112GO:0010497: plasmodesmata-mediated intercellular transport4.93E-03
113GO:0043562: cellular response to nitrogen levels4.93E-03
114GO:0010150: leaf senescence5.03E-03
115GO:0009409: response to cold5.15E-03
116GO:0010043: response to zinc ion5.59E-03
117GO:0046685: response to arsenic-containing substance5.59E-03
118GO:0019432: triglyceride biosynthetic process5.59E-03
119GO:0010112: regulation of systemic acquired resistance5.59E-03
120GO:0006754: ATP biosynthetic process5.59E-03
121GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process5.80E-03
122GO:0010205: photoinhibition6.27E-03
123GO:0043067: regulation of programmed cell death6.27E-03
124GO:2000280: regulation of root development6.27E-03
125GO:0048354: mucilage biosynthetic process involved in seed coat development6.27E-03
126GO:0055114: oxidation-reduction process6.71E-03
127GO:0010162: seed dormancy process6.99E-03
128GO:0009299: mRNA transcription6.99E-03
129GO:0007064: mitotic sister chromatid cohesion6.99E-03
130GO:0043069: negative regulation of programmed cell death6.99E-03
131GO:0009750: response to fructose7.73E-03
132GO:0016485: protein processing7.73E-03
133GO:0048229: gametophyte development7.73E-03
134GO:0009744: response to sucrose7.90E-03
135GO:0012501: programmed cell death8.49E-03
136GO:0015706: nitrate transport8.49E-03
137GO:0006626: protein targeting to mitochondrion9.29E-03
138GO:0042343: indole glucosinolate metabolic process1.10E-02
139GO:0046688: response to copper ion1.10E-02
140GO:0010167: response to nitrate1.10E-02
141GO:0000162: tryptophan biosynthetic process1.18E-02
142GO:0009944: polarity specification of adaxial/abaxial axis1.27E-02
143GO:0080147: root hair cell development1.27E-02
144GO:0009863: salicylic acid mediated signaling pathway1.27E-02
145GO:0006825: copper ion transport1.37E-02
146GO:0009620: response to fungus1.39E-02
147GO:0098542: defense response to other organism1.46E-02
148GO:0015992: proton transport1.46E-02
149GO:0009624: response to nematode1.52E-02
150GO:0009814: defense response, incompatible interaction1.56E-02
151GO:0016226: iron-sulfur cluster assembly1.56E-02
152GO:0007005: mitochondrion organization1.56E-02
153GO:0031348: negative regulation of defense response1.56E-02
154GO:0009686: gibberellin biosynthetic process1.66E-02
155GO:0009294: DNA mediated transformation1.66E-02
156GO:0009411: response to UV1.66E-02
157GO:0009625: response to insect1.66E-02
158GO:0006511: ubiquitin-dependent protein catabolic process1.69E-02
159GO:0042147: retrograde transport, endosome to Golgi1.86E-02
160GO:0042631: cellular response to water deprivation1.97E-02
161GO:0042391: regulation of membrane potential1.97E-02
162GO:0009960: endosperm development2.07E-02
163GO:0006520: cellular amino acid metabolic process2.07E-02
164GO:0009845: seed germination2.07E-02
165GO:0009646: response to absence of light2.18E-02
166GO:0048544: recognition of pollen2.18E-02
167GO:0009790: embryo development2.23E-02
168GO:0010183: pollen tube guidance2.29E-02
169GO:0048825: cotyledon development2.29E-02
170GO:0006635: fatty acid beta-oxidation2.41E-02
171GO:0009639: response to red or far red light2.76E-02
172GO:0006464: cellular protein modification process2.76E-02
173GO:0006904: vesicle docking involved in exocytosis2.88E-02
174GO:0001666: response to hypoxia3.13E-02
175GO:0006952: defense response3.20E-02
176GO:0009816: defense response to bacterium, incompatible interaction3.26E-02
177GO:0042128: nitrate assimilation3.39E-02
178GO:0009735: response to cytokinin3.46E-02
179GO:0009416: response to light stimulus3.87E-02
180GO:0009611: response to wounding3.97E-02
181GO:0009407: toxin catabolic process4.05E-02
182GO:0048527: lateral root development4.19E-02
183GO:0010119: regulation of stomatal movement4.19E-02
184GO:0009853: photorespiration4.48E-02
185GO:0045087: innate immune response4.48E-02
186GO:0009723: response to ethylene4.70E-02
187GO:0006839: mitochondrial transport4.91E-02
RankGO TermAdjusted P value
1GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
2GO:0008117: sphinganine-1-phosphate aldolase activity0.00E+00
3GO:0102132: 3-oxo-pimeloyl-[acp] methyl ester reductase activity0.00E+00
4GO:0008843: endochitinase activity0.00E+00
5GO:0004107: chorismate synthase activity0.00E+00
6GO:0004316: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity0.00E+00
7GO:0005046: KDEL sequence binding0.00E+00
8GO:0035885: exochitinase activity0.00E+00
9GO:0003756: protein disulfide isomerase activity5.77E-06
10GO:0051287: NAD binding1.52E-05
11GO:0008061: chitin binding5.00E-05
12GO:0047631: ADP-ribose diphosphatase activity6.58E-05
13GO:0005507: copper ion binding7.82E-05
14GO:0000210: NAD+ diphosphatase activity9.62E-05
15GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity2.43E-04
16GO:0080042: ADP-glucose pyrophosphohydrolase activity2.43E-04
17GO:0004048: anthranilate phosphoribosyltransferase activity2.43E-04
18GO:0004568: chitinase activity4.61E-04
19GO:0008233: peptidase activity4.98E-04
20GO:0045543: gibberellin 2-beta-dioxygenase activity5.39E-04
21GO:0080041: ADP-ribose pyrophosphohydrolase activity5.39E-04
22GO:0004617: phosphoglycerate dehydrogenase activity5.39E-04
23GO:0015152: glucose-6-phosphate transmembrane transporter activity5.39E-04
24GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity5.39E-04
25GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity5.39E-04
26GO:0017110: nucleoside-diphosphatase activity5.39E-04
27GO:0019172: glyoxalase III activity5.39E-04
28GO:0004775: succinate-CoA ligase (ADP-forming) activity5.39E-04
29GO:0004338: glucan exo-1,3-beta-glucosidase activity5.39E-04
30GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity5.39E-04
31GO:0004385: guanylate kinase activity5.39E-04
32GO:0004776: succinate-CoA ligase (GDP-forming) activity5.39E-04
33GO:0004634: phosphopyruvate hydratase activity5.39E-04
34GO:0005388: calcium-transporting ATPase activity6.91E-04
35GO:0004190: aspartic-type endopeptidase activity8.68E-04
36GO:0071917: triose-phosphate transmembrane transporter activity8.75E-04
37GO:0001664: G-protein coupled receptor binding8.75E-04
38GO:0016531: copper chaperone activity8.75E-04
39GO:0004148: dihydrolipoyl dehydrogenase activity8.75E-04
40GO:0031683: G-protein beta/gamma-subunit complex binding8.75E-04
41GO:0017089: glycolipid transporter activity1.25E-03
42GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity1.25E-03
43GO:0035529: NADH pyrophosphatase activity1.25E-03
44GO:0004449: isocitrate dehydrogenase (NAD+) activity1.25E-03
45GO:0030246: carbohydrate binding1.26E-03
46GO:0004298: threonine-type endopeptidase activity1.28E-03
47GO:0004674: protein serine/threonine kinase activity1.49E-03
48GO:0005516: calmodulin binding1.57E-03
49GO:0047769: arogenate dehydratase activity1.67E-03
50GO:0004664: prephenate dehydratase activity1.67E-03
51GO:0051861: glycolipid binding1.67E-03
52GO:0046923: ER retention sequence binding1.67E-03
53GO:0015120: phosphoglycerate transmembrane transporter activity1.67E-03
54GO:0005524: ATP binding1.84E-03
55GO:0046933: proton-transporting ATP synthase activity, rotational mechanism2.09E-03
56GO:0030976: thiamine pyrophosphate binding2.62E-03
57GO:1990714: hydroxyproline O-galactosyltransferase activity2.62E-03
58GO:0004029: aldehyde dehydrogenase (NAD) activity2.62E-03
59GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity2.62E-03
60GO:0051920: peroxiredoxin activity3.15E-03
61GO:0102391: decanoate--CoA ligase activity3.15E-03
62GO:0004012: phospholipid-translocating ATPase activity3.15E-03
63GO:0004144: diacylglycerol O-acyltransferase activity3.15E-03
64GO:0004656: procollagen-proline 4-dioxygenase activity3.15E-03
65GO:0016758: transferase activity, transferring hexosyl groups3.23E-03
66GO:0008237: metallopeptidase activity3.31E-03
67GO:0016597: amino acid binding3.50E-03
68GO:0016831: carboxy-lyase activity3.72E-03
69GO:0008235: metalloexopeptidase activity3.72E-03
70GO:0008121: ubiquinol-cytochrome-c reductase activity3.72E-03
71GO:0008320: protein transmembrane transporter activity3.72E-03
72GO:0004467: long-chain fatty acid-CoA ligase activity3.72E-03
73GO:0004714: transmembrane receptor protein tyrosine kinase activity4.31E-03
74GO:0016209: antioxidant activity4.31E-03
75GO:0043022: ribosome binding4.31E-03
76GO:0050897: cobalt ion binding5.59E-03
77GO:0004672: protein kinase activity6.04E-03
78GO:0003746: translation elongation factor activity6.13E-03
79GO:0015112: nitrate transmembrane transporter activity6.27E-03
80GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity6.27E-03
81GO:0008171: O-methyltransferase activity6.99E-03
82GO:0015020: glucuronosyltransferase activity6.99E-03
83GO:0004129: cytochrome-c oxidase activity7.73E-03
84GO:0004177: aminopeptidase activity7.73E-03
85GO:0008378: galactosyltransferase activity8.49E-03
86GO:0051537: 2 iron, 2 sulfur cluster binding8.55E-03
87GO:0000287: magnesium ion binding8.56E-03
88GO:0005262: calcium channel activity9.29E-03
89GO:0015114: phosphate ion transmembrane transporter activity9.29E-03
90GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism9.29E-03
91GO:0005315: inorganic phosphate transmembrane transporter activity9.29E-03
92GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.01E-02
93GO:0008266: poly(U) RNA binding1.01E-02
94GO:0050660: flavin adenine dinucleotide binding1.06E-02
95GO:0030552: cAMP binding1.10E-02
96GO:0030553: cGMP binding1.10E-02
97GO:0003712: transcription cofactor activity1.10E-02
98GO:0046872: metal ion binding1.22E-02
99GO:0004407: histone deacetylase activity1.27E-02
100GO:0005216: ion channel activity1.37E-02
101GO:0080043: quercetin 3-O-glucosyltransferase activity1.39E-02
102GO:0080044: quercetin 7-O-glucosyltransferase activity1.39E-02
103GO:0033612: receptor serine/threonine kinase binding1.46E-02
104GO:0016746: transferase activity, transferring acyl groups1.57E-02
105GO:0008810: cellulase activity1.66E-02
106GO:0004499: N,N-dimethylaniline monooxygenase activity1.76E-02
107GO:0005249: voltage-gated potassium channel activity1.97E-02
108GO:0030551: cyclic nucleotide binding1.97E-02
109GO:0005515: protein binding2.07E-02
110GO:0010181: FMN binding2.18E-02
111GO:0005525: GTP binding2.25E-02
112GO:0008565: protein transporter activity2.29E-02
113GO:0004872: receptor activity2.29E-02
114GO:0015297: antiporter activity2.52E-02
115GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.64E-02
116GO:0008194: UDP-glycosyltransferase activity2.95E-02
117GO:0030247: polysaccharide binding3.52E-02
118GO:0008757: S-adenosylmethionine-dependent methyltransferase activity3.65E-02
119GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity3.78E-02
120GO:0016301: kinase activity3.81E-02
121GO:0015238: drug transmembrane transporter activity3.92E-02
122GO:0004222: metalloendopeptidase activity4.05E-02
123GO:0030145: manganese ion binding4.19E-02
124GO:0016614: oxidoreductase activity, acting on CH-OH group of donors4.19E-02
125GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.48E-02
126GO:0000987: core promoter proximal region sequence-specific DNA binding4.62E-02
127GO:0050661: NADP binding4.91E-02
RankGO TermAdjusted P value
1GO:0000327: lytic vacuole within protein storage vacuole0.00E+00
2GO:0005886: plasma membrane1.20E-06
3GO:0005758: mitochondrial intermembrane space2.05E-06
4GO:0005783: endoplasmic reticulum3.82E-06
5GO:0005788: endoplasmic reticulum lumen3.60E-05
6GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)4.12E-05
7GO:0005829: cytosol1.53E-04
8GO:0045273: respiratory chain complex II2.22E-04
9GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)2.22E-04
10GO:0000502: proteasome complex2.25E-04
11GO:0031351: integral component of plastid membrane2.43E-04
12GO:0019773: proteasome core complex, alpha-subunit complex2.74E-04
13GO:0005747: mitochondrial respiratory chain complex I3.12E-04
14GO:0005740: mitochondrial envelope4.61E-04
15GO:0008541: proteasome regulatory particle, lid subcomplex5.33E-04
16GO:0005901: caveola5.39E-04
17GO:0000015: phosphopyruvate hydratase complex5.39E-04
18GO:0030134: ER to Golgi transport vesicle5.39E-04
19GO:0009507: chloroplast7.89E-04
20GO:0005753: mitochondrial proton-transporting ATP synthase complex8.68E-04
21GO:0070062: extracellular exosome1.25E-03
22GO:0005839: proteasome core complex1.28E-03
23GO:0005741: mitochondrial outer membrane1.28E-03
24GO:0005774: vacuolar membrane1.60E-03
25GO:0030660: Golgi-associated vesicle membrane1.67E-03
26GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane1.67E-03
27GO:0005739: mitochondrion1.78E-03
28GO:0048046: apoplast1.81E-03
29GO:0005746: mitochondrial respiratory chain2.13E-03
30GO:0005801: cis-Golgi network3.15E-03
31GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane4.31E-03
32GO:0005773: vacuole4.78E-03
33GO:0000326: protein storage vacuole4.93E-03
34GO:0005794: Golgi apparatus5.01E-03
35GO:0005618: cell wall6.13E-03
36GO:0005789: endoplasmic reticulum membrane6.52E-03
37GO:0005765: lysosomal membrane7.73E-03
38GO:0031012: extracellular matrix9.29E-03
39GO:0005750: mitochondrial respiratory chain complex III1.01E-02
40GO:0005795: Golgi stack1.10E-02
41GO:0005834: heterotrimeric G-protein complex1.35E-02
42GO:0009536: plastid1.36E-02
43GO:0070469: respiratory chain1.37E-02
44GO:0045271: respiratory chain complex I1.37E-02
45GO:0016021: integral component of membrane1.77E-02
46GO:0005623: cell1.96E-02
47GO:0005730: nucleolus2.35E-02
48GO:0005759: mitochondrial matrix2.40E-02
49GO:0000145: exocyst2.52E-02
50GO:0032580: Golgi cisterna membrane2.76E-02
51GO:0005887: integral component of plasma membrane2.77E-02
52GO:0000151: ubiquitin ligase complex3.78E-02
53GO:0016020: membrane4.10E-02
54GO:0009505: plant-type cell wall4.24E-02
Gene type



Gene DE type