gene detail

Gene description

TAIR ID: AT1G49600

Short description: RNA-binding protein 47A

Pathogen responsiveness: -1.17

General responsiveness: -1.32

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

response to cytokinin

GO cellular component

cytosol

GO molecular function

unkown

Protein domain

Pfam	PF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMART	SM00360, RRM

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260, AT5G61850, AT4G31800

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

Coexpression network

Differentially expressed condition

3 conditions

Show entries

Search:

Series	Control	Treatment	Log₂FC	Adj. P value
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	-1.72	3.56E-05
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.03	1.21E-02
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-3.15	2.32E-09

Showing 1 to 3 of 3 entries