GO Enrichment Analysis of Co-expressed Genes with
AT1G49600
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031081: nuclear pore distribution | 0.00E+00 |
| 2 | GO:0042794: rRNA transcription from plastid promoter | 0.00E+00 |
| 3 | GO:0009658: chloroplast organization | 1.74E-05 |
| 4 | GO:0036228: protein targeting to nuclear inner membrane | 3.25E-05 |
| 5 | GO:0048657: anther wall tapetum cell differentiation | 3.25E-05 |
| 6 | GO:0033206: meiotic cytokinesis | 3.25E-05 |
| 7 | GO:0009729: detection of brassinosteroid stimulus | 3.25E-05 |
| 8 | GO:0006999: nuclear pore organization | 3.25E-05 |
| 9 | GO:0000972: transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery | 3.25E-05 |
| 10 | GO:1900140: regulation of seedling development | 1.42E-04 |
| 11 | GO:1904278: positive regulation of wax biosynthetic process | 1.42E-04 |
| 12 | GO:0006808: regulation of nitrogen utilization | 2.85E-04 |
| 13 | GO:1900864: mitochondrial RNA modification | 2.85E-04 |
| 14 | GO:0060548: negative regulation of cell death | 2.85E-04 |
| 15 | GO:0006405: RNA export from nucleus | 3.65E-04 |
| 16 | GO:0042793: transcription from plastid promoter | 4.48E-04 |
| 17 | GO:0000911: cytokinesis by cell plate formation | 5.36E-04 |
| 18 | GO:2000033: regulation of seed dormancy process | 5.36E-04 |
| 19 | GO:0010098: suspensor development | 6.27E-04 |
| 20 | GO:0009938: negative regulation of gibberellic acid mediated signaling pathway | 7.22E-04 |
| 21 | GO:0042255: ribosome assembly | 7.22E-04 |
| 22 | GO:0006353: DNA-templated transcription, termination | 7.22E-04 |
| 23 | GO:0010233: phloem transport | 8.20E-04 |
| 24 | GO:0006607: NLS-bearing protein import into nucleus | 9.20E-04 |
| 25 | GO:0006396: RNA processing | 1.08E-03 |
| 26 | GO:0016441: posttranscriptional gene silencing | 1.13E-03 |
| 27 | GO:0006325: chromatin organization | 1.13E-03 |
| 28 | GO:0010102: lateral root morphogenesis | 1.47E-03 |
| 29 | GO:0010020: chloroplast fission | 1.60E-03 |
| 30 | GO:0006270: DNA replication initiation | 1.60E-03 |
| 31 | GO:2000377: regulation of reactive oxygen species metabolic process | 1.99E-03 |
| 32 | GO:0000027: ribosomal large subunit assembly | 1.99E-03 |
| 33 | GO:0009863: salicylic acid mediated signaling pathway | 1.99E-03 |
| 34 | GO:0010187: negative regulation of seed germination | 1.99E-03 |
| 35 | GO:0010584: pollen exine formation | 2.69E-03 |
| 36 | GO:0051028: mRNA transport | 2.84E-03 |
| 37 | GO:0010501: RNA secondary structure unwinding | 3.00E-03 |
| 38 | GO:0006606: protein import into nucleus | 3.00E-03 |
| 39 | GO:0010268: brassinosteroid homeostasis | 3.15E-03 |
| 40 | GO:0010583: response to cyclopentenone | 3.80E-03 |
| 41 | GO:0032502: developmental process | 3.80E-03 |
| 42 | GO:0010090: trichome morphogenesis | 3.97E-03 |
| 43 | GO:0009911: positive regulation of flower development | 4.67E-03 |
| 44 | GO:0010029: regulation of seed germination | 4.85E-03 |
| 45 | GO:0009627: systemic acquired resistance | 5.04E-03 |
| 46 | GO:0010218: response to far red light | 5.99E-03 |
| 47 | GO:0009867: jasmonic acid mediated signaling pathway | 6.60E-03 |
| 48 | GO:0009965: leaf morphogenesis | 8.53E-03 |
| 49 | GO:0006260: DNA replication | 8.99E-03 |
| 50 | GO:0042538: hyperosmotic salinity response | 9.22E-03 |
| 51 | GO:0006364: rRNA processing | 9.69E-03 |
| 52 | GO:0010224: response to UV-B | 9.93E-03 |
| 53 | GO:0006417: regulation of translation | 1.04E-02 |
| 54 | GO:0006355: regulation of transcription, DNA-templated | 1.11E-02 |
| 55 | GO:0009740: gibberellic acid mediated signaling pathway | 1.19E-02 |
| 56 | GO:0009742: brassinosteroid mediated signaling pathway | 1.29E-02 |
| 57 | GO:0009058: biosynthetic process | 1.51E-02 |
| 58 | GO:0009790: embryo development | 1.62E-02 |
| 59 | GO:0009739: response to gibberellin | 1.98E-02 |
| 60 | GO:0008380: RNA splicing | 2.07E-02 |
| 61 | GO:0009826: unidimensional cell growth | 2.43E-02 |
| 62 | GO:0006970: response to osmotic stress | 2.63E-02 |
| 63 | GO:0009723: response to ethylene | 2.77E-02 |
| 64 | GO:0048366: leaf development | 2.80E-02 |
| 65 | GO:0006351: transcription, DNA-templated | 3.19E-02 |
| 66 | GO:0032259: methylation | 3.72E-02 |
| 67 | GO:0006629: lipid metabolic process | 3.84E-02 |
| 68 | GO:0009793: embryo development ending in seed dormancy | 4.11E-02 |
| 69 | GO:0009873: ethylene-activated signaling pathway | 4.60E-02 |
| 70 | GO:0009734: auxin-activated signaling pathway | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004808: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity | 0.00E+00 |
| 2 | GO:0017056: structural constituent of nuclear pore | 9.60E-06 |
| 3 | GO:0005487: nucleocytoplasmic transporter activity | 1.95E-05 |
| 4 | GO:0070181: small ribosomal subunit rRNA binding | 1.42E-04 |
| 5 | GO:0005496: steroid binding | 3.65E-04 |
| 6 | GO:0003688: DNA replication origin binding | 4.48E-04 |
| 7 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 7.22E-04 |
| 8 | GO:0003690: double-stranded DNA binding | 7.76E-04 |
| 9 | GO:0000989: transcription factor activity, transcription factor binding | 9.20E-04 |
| 10 | GO:0009982: pseudouridine synthase activity | 1.47E-03 |
| 11 | GO:0003727: single-stranded RNA binding | 2.69E-03 |
| 12 | GO:0016759: cellulose synthase activity | 4.14E-03 |
| 13 | GO:0046983: protein dimerization activity | 4.36E-03 |
| 14 | GO:0004004: ATP-dependent RNA helicase activity | 5.22E-03 |
| 15 | GO:0003697: single-stranded DNA binding | 6.60E-03 |
| 16 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 7.01E-03 |
| 17 | GO:0016298: lipase activity | 9.93E-03 |
| 18 | GO:0003723: RNA binding | 1.10E-02 |
| 19 | GO:0016874: ligase activity | 1.19E-02 |
| 20 | GO:0008026: ATP-dependent helicase activity | 1.29E-02 |
| 21 | GO:0019843: rRNA binding | 1.46E-02 |
| 22 | GO:0042802: identical protein binding | 2.17E-02 |
| 23 | GO:0008168: methyltransferase activity | 2.43E-02 |
| 24 | GO:0046982: protein heterodimerization activity | 2.46E-02 |
| 25 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 3.04E-02 |
| 26 | GO:0042803: protein homodimerization activity | 3.42E-02 |
| 27 | GO:0003735: structural constituent of ribosome | 3.54E-02 |