co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G49600

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010274: hydrotropism	0.00E+00
2	GO:0071731: response to nitric oxide	0.00E+00
3	GO:0051050: positive regulation of transport	0.00E+00
4	GO:0006364: rRNA processing	2.22E-06
5	GO:0006458: 'de novo' protein folding	8.18E-06
6	GO:0006412: translation	2.09E-05
7	GO:0010162: seed dormancy process	3.67E-05
8	GO:0042254: ribosome biogenesis	3.73E-05
9	GO:0006169: adenosine salvage	4.31E-05
10	GO:0009944: polarity specification of adaxial/abaxial axis	1.00E-04
11	GO:0045041: protein import into mitochondrial intermembrane space	1.07E-04
12	GO:0034470: ncRNA processing	1.07E-04
13	GO:0061077: chaperone-mediated protein folding	1.24E-04
14	GO:0007005: mitochondrion organization	1.37E-04
15	GO:0009294: DNA mediated transformation	1.51E-04
16	GO:0006556: S-adenosylmethionine biosynthetic process	1.84E-04
17	GO:0051131: chaperone-mediated protein complex assembly	2.70E-04
18	GO:0046686: response to cadmium ion	3.16E-04
19	GO:0042273: ribosomal large subunit biogenesis	3.64E-04
20	GO:0044209: AMP salvage	4.63E-04
21	GO:0016554: cytidine to uridine editing	5.67E-04
22	GO:0042026: protein refolding	6.76E-04
23	GO:0006002: fructose 6-phosphate metabolic process	1.03E-03
24	GO:0006189: 'de novo' IMP biosynthetic process	1.16E-03
25	GO:0016569: covalent chromatin modification	1.40E-03
26	GO:0000027: ribosomal large subunit assembly	2.52E-03
27	GO:0006730: one-carbon metabolic process	3.06E-03
28	GO:0009693: ethylene biosynthetic process	3.24E-03
29	GO:0008033: tRNA processing	3.82E-03
30	GO:0080156: mitochondrial mRNA modification	4.64E-03
31	GO:0016032: viral process	4.86E-03
32	GO:0071281: cellular response to iron ion	5.07E-03
33	GO:0009651: response to salt stress	5.36E-03
34	GO:0045892: negative regulation of transcription, DNA-templated	5.84E-03
35	GO:0016049: cell growth	6.94E-03
36	GO:0048527: lateral root development	7.95E-03
37	GO:0000154: rRNA modification	1.10E-02
38	GO:0009735: response to cytokinin	1.15E-02
39	GO:0006096: glycolytic process	1.40E-02
40	GO:0009553: embryo sac development	1.57E-02
41	GO:0006457: protein folding	1.63E-02
42	GO:0006414: translational elongation	1.88E-02
43	GO:0009790: embryo development	2.10E-02
44	GO:0006413: translational initiation	2.25E-02
45	GO:0009451: RNA modification	2.40E-02
46	GO:0009658: chloroplast organization	3.22E-02
47	GO:0009723: response to ethylene	3.58E-02
48	GO:0015979: photosynthesis	4.13E-02
49	GO:0032259: methylation	4.81E-02
50	GO:0009408: response to heat	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0044183: protein binding involved in protein folding	3.71E-07
2	GO:0003735: structural constituent of ribosome	6.55E-07
3	GO:0004407: histone deacetylase activity	1.41E-06
4	GO:0030515: snoRNA binding	1.13E-05
5	GO:0050897: cobalt ion binding	2.62E-05
6	GO:0042134: rRNA primary transcript binding	4.31E-05
7	GO:0004638: phosphoribosylaminoimidazole carboxylase activity	4.31E-05
8	GO:0004001: adenosine kinase activity	4.31E-05
9	GO:0051082: unfolded protein binding	1.20E-04
10	GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity	1.84E-04
11	GO:0004478: methionine adenosyltransferase activity	1.84E-04
12	GO:0003746: translation elongation factor activity	6.25E-04
13	GO:0003872: 6-phosphofructokinase activity	7.90E-04
14	GO:0003723: RNA binding	1.44E-03
15	GO:0000049: tRNA binding	1.72E-03
16	GO:0019843: rRNA binding	1.84E-03
17	GO:0000166: nucleotide binding	1.97E-03
18	GO:0005524: ATP binding	4.23E-03
19	GO:0010181: FMN binding	4.23E-03
20	GO:0003924: GTPase activity	7.08E-03
21	GO:0051539: 4 iron, 4 sulfur cluster binding	9.28E-03
22	GO:0016787: hydrolase activity	1.26E-02
23	GO:0005507: copper ion binding	1.80E-02
24	GO:0016829: lyase activity	1.99E-02
25	GO:0003743: translation initiation factor activity	2.64E-02
26	GO:0046872: metal ion binding	2.90E-02
27	GO:0008168: methyltransferase activity	3.14E-02
28	GO:0008270: zinc ion binding	4.01E-02

Rank	GO Term	Adjusted P value
1	GO:0034457: Mpp10 complex	0.00E+00
2	GO:0005832: chaperonin-containing T-complex	0.00E+00
3	GO:0005730: nucleolus	2.07E-15
4	GO:0032040: small-subunit processome	4.80E-07
5	GO:0005618: cell wall	7.65E-07
6	GO:0022626: cytosolic ribosome	2.58E-05
7	GO:0022627: cytosolic small ribosomal subunit	2.65E-05
8	GO:0032541: cortical endoplasmic reticulum	4.31E-05
9	GO:0010318: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex	4.31E-05
10	GO:0005840: ribosome	1.46E-04
11	GO:0005759: mitochondrial matrix	2.27E-04
12	GO:0005774: vacuolar membrane	2.82E-04
13	GO:0031428: box C/D snoRNP complex	5.67E-04
14	GO:0005829: cytosol	5.73E-04
15	GO:0022625: cytosolic large ribosomal subunit	6.35E-04
16	GO:0016363: nuclear matrix	6.76E-04
17	GO:0030687: preribosome, large subunit precursor	7.90E-04
18	GO:0034399: nuclear periphery	9.08E-04
19	GO:0005747: mitochondrial respiratory chain complex I	1.28E-03
20	GO:0015030: Cajal body	1.29E-03
21	GO:0019013: viral nucleocapsid	1.87E-03
22	GO:0015935: small ribosomal subunit	2.88E-03
23	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	4.26E-03
24	GO:0030529: intracellular ribonucleoprotein complex	5.98E-03
25	GO:0015934: large ribosomal subunit	7.95E-03
26	GO:0005739: mitochondrion	1.10E-02
27	GO:0009506: plasmodesma	1.35E-02
28	GO:0005732: small nucleolar ribonucleoprotein complex	1.70E-02
29	GO:0005654: nucleoplasm	1.84E-02
30	GO:0005634: nucleus	2.07E-02
31	GO:0005737: cytoplasm	2.52E-02
32	GO:0046658: anchored component of plasma membrane	2.88E-02
33	GO:0005773: vacuole	3.93E-02