gene detail

Gene description

TAIR ID: AT1G49580

Short description: Calcium-dependent protein kinase (CDPK) family protein

Pathogen responsiveness: -0.90

General responsiveness: -1.00

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

unkown

GO cellular component

plasma membrane

GO molecular function

calcium-dependent protein serine/threonine phosphatase activity, metal ion binding, ATP binding, kinase activity

Protein domain

Pfam	PF00069, Protein kinase domain
SMART	SM00220, S_TKc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G09290, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

10 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	-1.50	2.25E-07
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-1.59	1.66E-04
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.70	4.32E-09
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.90	1.17E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.70	1.59E-02
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-1.91	5.99E-14
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.53	1.91E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.09	1.99E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.61	8.87E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-2.07	1.99E-14