co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G49580

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006399: tRNA metabolic process	0.00E+00
2	GO:0006568: tryptophan metabolic process	2.38E-05
3	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	4.33E-05
4	GO:2001141: regulation of RNA biosynthetic process	6.64E-05
5	GO:0045038: protein import into chloroplast thylakoid membrane	1.21E-04
6	GO:0048280: vesicle fusion with Golgi apparatus	1.85E-04
7	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	2.19E-04
8	GO:0048564: photosystem I assembly	2.54E-04
9	GO:0045292: mRNA cis splicing, via spliceosome	2.54E-04
10	GO:0071482: cellular response to light stimulus	2.91E-04
11	GO:0000373: Group II intron splicing	3.29E-04
12	GO:0009451: RNA modification	3.91E-04
13	GO:0006896: Golgi to vacuole transport	4.07E-04
14	GO:0006352: DNA-templated transcription, initiation	4.48E-04
15	GO:2000012: regulation of auxin polar transport	5.33E-04
16	GO:0042147: retrograde transport, endosome to Golgi	1.00E-03
17	GO:0006623: protein targeting to vacuole	1.21E-03
18	GO:0006891: intra-Golgi vesicle-mediated transport	1.26E-03
19	GO:0006888: ER to Golgi vesicle-mediated transport	1.79E-03
20	GO:0007568: aging	2.12E-03
21	GO:0009637: response to blue light	2.25E-03
22	GO:0010114: response to red light	2.67E-03
23	GO:0009658: chloroplast organization	8.16E-03
24	GO:0009793: embryo development ending in seed dormancy	8.27E-03
25	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	9.71E-03
26	GO:0006629: lipid metabolic process	1.25E-02
27	GO:0005975: carbohydrate metabolic process	4.18E-02

Rank	GO Term	Adjusted P value
1	GO:0005048: signal sequence binding	0.00E+00
2	GO:0004425: indole-3-glycerol-phosphate synthase activity	8.86E-06
3	GO:0001053: plastid sigma factor activity	9.27E-05
4	GO:0016987: sigma factor activity	9.27E-05
5	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	1.85E-04
6	GO:0008312: 7S RNA binding	2.54E-04
7	GO:0008081: phosphoric diester hydrolase activity	5.33E-04
8	GO:0004519: endonuclease activity	1.12E-03
9	GO:0008236: serine-type peptidase activity	1.86E-03
10	GO:0000149: SNARE binding	2.39E-03
11	GO:0005484: SNAP receptor activity	2.67E-03
12	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	3.26E-03
13	GO:0005509: calcium ion binding	3.31E-03
14	GO:0004252: serine-type endopeptidase activity	5.19E-03
15	GO:0003723: RNA binding	5.20E-03
16	GO:0008565: protein transporter activity	5.46E-03
17	GO:0003924: GTPase activity	1.25E-02
18	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.29E-02
19	GO:0005525: GTP binding	2.67E-02
20	GO:0004672: protein kinase activity	4.08E-02
21	GO:0003729: mRNA binding	4.12E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	1.90E-06
2	GO:0080085: signal recognition particle, chloroplast targeting	2.38E-05
3	GO:0012507: ER to Golgi transport vesicle membrane	2.54E-04
4	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	2.91E-04
5	GO:0090404: pollen tube tip	4.48E-04
6	GO:0005578: proteinaceous extracellular matrix	5.33E-04
7	GO:0043231: intracellular membrane-bounded organelle	1.14E-03
8	GO:0009506: plasmodesma	2.00E-03
9	GO:0031902: late endosome membrane	2.52E-03
10	GO:0031201: SNARE complex	2.52E-03
11	GO:0005886: plasma membrane	2.87E-03
12	GO:0009570: chloroplast stroma	4.17E-03
13	GO:0046658: anchored component of plasma membrane	7.32E-03
14	GO:0005618: cell wall	1.42E-02
15	GO:0009534: chloroplast thylakoid	2.14E-02
16	GO:0005802: trans-Golgi network	2.62E-02
17	GO:0005768: endosome	2.88E-02
18	GO:0009505: plant-type cell wall	3.64E-02
19	GO:0005789: endoplasmic reticulum membrane	4.20E-02