Gene: AT1G49480
     

Gene description


TAIR ID: AT1G49480

Short description: related to vernalization1 1

Pathogen responsiveness: -1.28

General responsiveness: -3.24

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, response to cold, cellular protein localization, transcription


GO cellular component


nucleus, plasma membrane


GO molecular function


transcription factor activity, sequence-specific DNA binding, DNA binding, protein binding


Protein domain


PfamPF02362, B3 DNA binding domain
SMARTSM01019, B3

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT3G14230, AT4G18770

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


5 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Penta, controlPenta, Flg22 2 h-1.609.27E-06
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h2.075.35E-11
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.989.41E-11
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h2.036.81E-11
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.171.08E-11






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