co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G49480

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0018316: peptide cross-linking via L-cystine	0.00E+00
2	GO:0010157: response to chlorate	0.00E+00
3	GO:0009264: deoxyribonucleotide catabolic process	0.00E+00
4	GO:0080149: sucrose induced translational repression	0.00E+00
5	GO:1901038: cyanidin 3-O-glucoside metabolic process	0.00E+00
6	GO:0000024: maltose biosynthetic process	0.00E+00
7	GO:0010423: negative regulation of brassinosteroid biosynthetic process	0.00E+00
8	GO:0051555: flavonol biosynthetic process	1.84E-08
9	GO:0009813: flavonoid biosynthetic process	1.39E-07
10	GO:0080167: response to karrikin	1.82E-07
11	GO:0009963: positive regulation of flavonoid biosynthetic process	5.26E-06
12	GO:0010224: response to UV-B	2.89E-05
13	GO:0050691: regulation of defense response to virus by host	1.06E-04
14	GO:0019605: butyrate metabolic process	1.06E-04
15	GO:0071454: cellular response to anoxia	1.06E-04
16	GO:0006083: acetate metabolic process	1.06E-04
17	GO:0048438: floral whorl development	1.06E-04
18	GO:0031539: positive regulation of anthocyanin metabolic process	1.06E-04
19	GO:0000272: polysaccharide catabolic process	1.65E-04
20	GO:0009698: phenylpropanoid metabolic process	1.65E-04
21	GO:0010220: positive regulation of vernalization response	2.48E-04
22	GO:0032886: regulation of microtubule-based process	2.48E-04
23	GO:0080183: response to photooxidative stress	2.48E-04
24	GO:1900386: positive regulation of flavonol biosynthetic process	2.48E-04
25	GO:0071395: cellular response to jasmonic acid stimulus	2.48E-04
26	GO:0080153: negative regulation of reductive pentose-phosphate cycle	2.48E-04
27	GO:0071712: ER-associated misfolded protein catabolic process	2.48E-04
28	GO:0019388: galactose catabolic process	2.48E-04
29	GO:1901562: response to paraquat	4.12E-04
30	GO:0010253: UDP-rhamnose biosynthetic process	4.12E-04
31	GO:0046417: chorismate metabolic process	4.12E-04
32	GO:0042780: tRNA 3'-end processing	4.12E-04
33	GO:0040009: regulation of growth rate	4.12E-04
34	GO:0006651: diacylglycerol biosynthetic process	4.12E-04
35	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	4.12E-04
36	GO:0006556: S-adenosylmethionine biosynthetic process	4.12E-04
37	GO:0009411: response to UV	5.04E-04
38	GO:0009590: detection of gravity	5.92E-04
39	GO:0042823: pyridoxal phosphate biosynthetic process	5.92E-04
40	GO:0042274: ribosomal small subunit biogenesis	7.86E-04
41	GO:0006097: glyoxylate cycle	9.92E-04
42	GO:0009435: NAD biosynthetic process	9.92E-04
43	GO:0071368: cellular response to cytokinin stimulus	9.92E-04
44	GO:0010304: PSII associated light-harvesting complex II catabolic process	1.21E-03
45	GO:0006751: glutathione catabolic process	1.21E-03
46	GO:0006555: methionine metabolic process	1.21E-03
47	GO:0042732: D-xylose metabolic process	1.21E-03
48	GO:0010315: auxin efflux	1.21E-03
49	GO:0006559: L-phenylalanine catabolic process	1.21E-03
50	GO:0000060: protein import into nucleus, translocation	1.21E-03
51	GO:0006796: phosphate-containing compound metabolic process	1.21E-03
52	GO:0010077: maintenance of inflorescence meristem identity	1.45E-03
53	GO:0010076: maintenance of floral meristem identity	1.45E-03
54	GO:0017148: negative regulation of translation	1.45E-03
55	GO:0098869: cellular oxidant detoxification	1.70E-03
56	GO:0009704: de-etiolation	1.97E-03
57	GO:0005978: glycogen biosynthetic process	1.97E-03
58	GO:0009787: regulation of abscisic acid-activated signaling pathway	1.97E-03
59	GO:0010099: regulation of photomorphogenesis	2.24E-03
60	GO:0022900: electron transport chain	2.24E-03
61	GO:0015996: chlorophyll catabolic process	2.24E-03
62	GO:0009926: auxin polar transport	2.49E-03
63	GO:0009744: response to sucrose	2.49E-03
64	GO:0031347: regulation of defense response	3.01E-03
65	GO:0009809: lignin biosynthetic process	3.35E-03
66	GO:1903507: negative regulation of nucleic acid-templated transcription	3.47E-03
67	GO:0048229: gametophyte development	3.47E-03
68	GO:0009073: aromatic amino acid family biosynthetic process	3.47E-03
69	GO:0009909: regulation of flower development	3.71E-03
70	GO:0016925: protein sumoylation	3.81E-03
71	GO:0005983: starch catabolic process	3.81E-03
72	GO:0045037: protein import into chloroplast stroma	3.81E-03
73	GO:0010582: floral meristem determinacy	3.81E-03
74	GO:0006006: glucose metabolic process	4.16E-03
75	GO:0009718: anthocyanin-containing compound biosynthetic process	4.16E-03
76	GO:0010223: secondary shoot formation	4.52E-03
77	GO:0009934: regulation of meristem structural organization	4.52E-03
78	GO:0034605: cellular response to heat	4.52E-03
79	GO:0002237: response to molecule of bacterial origin	4.52E-03
80	GO:0019253: reductive pentose-phosphate cycle	4.52E-03
81	GO:0009225: nucleotide-sugar metabolic process	4.88E-03
82	GO:0042753: positive regulation of circadian rhythm	5.26E-03
83	GO:0071555: cell wall organization	5.29E-03
84	GO:0006487: protein N-linked glycosylation	5.65E-03
85	GO:0030154: cell differentiation	6.02E-03
86	GO:0009733: response to auxin	6.31E-03
87	GO:0010017: red or far-red light signaling pathway	6.87E-03
88	GO:0006730: one-carbon metabolic process	6.87E-03
89	GO:2000022: regulation of jasmonic acid mediated signaling pathway	6.87E-03
90	GO:0010584: pollen exine formation	7.74E-03
91	GO:0042127: regulation of cell proliferation	7.74E-03
92	GO:0016117: carotenoid biosynthetic process	8.19E-03
93	GO:0070417: cellular response to cold	8.19E-03
94	GO:0008033: tRNA processing	8.64E-03
95	GO:0006342: chromatin silencing	9.10E-03
96	GO:0009958: positive gravitropism	9.10E-03
97	GO:0006520: cellular amino acid metabolic process	9.10E-03
98	GO:0009739: response to gibberellin	9.17E-03
99	GO:0007018: microtubule-based movement	9.58E-03
100	GO:0019252: starch biosynthetic process	1.01E-02
101	GO:0045893: positive regulation of transcription, DNA-templated	1.06E-02
102	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.06E-02
103	GO:1901657: glycosyl compound metabolic process	1.16E-02
104	GO:0010252: auxin homeostasis	1.21E-02
105	GO:0009911: positive regulation of flower development	1.37E-02
106	GO:0009723: response to ethylene	1.47E-02
107	GO:0048573: photoperiodism, flowering	1.54E-02
108	GO:0010311: lateral root formation	1.71E-02
109	GO:0010218: response to far red light	1.77E-02
110	GO:0006811: ion transport	1.77E-02
111	GO:0010119: regulation of stomatal movement	1.83E-02
112	GO:0045454: cell redox homeostasis	1.89E-02
113	GO:0009751: response to salicylic acid	2.30E-02
114	GO:0006629: lipid metabolic process	2.33E-02
115	GO:0009408: response to heat	2.33E-02
116	GO:0010114: response to red light	2.34E-02
117	GO:0009640: photomorphogenesis	2.34E-02
118	GO:0042546: cell wall biogenesis	2.41E-02
119	GO:0009753: response to jasmonic acid	2.50E-02
120	GO:0008152: metabolic process	2.57E-02
121	GO:0000165: MAPK cascade	2.68E-02
122	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.68E-02
123	GO:0009585: red, far-red light phototransduction	2.89E-02
124	GO:0051603: proteolysis involved in cellular protein catabolic process	2.97E-02
125	GO:0016569: covalent chromatin modification	3.56E-02
126	GO:0009740: gibberellic acid mediated signaling pathway	3.56E-02
127	GO:0042545: cell wall modification	3.64E-02
128	GO:0009742: brassinosteroid mediated signaling pathway	3.88E-02
129	GO:0009416: response to light stimulus	4.13E-02
130	GO:0009611: response to wounding	4.22E-02
131	GO:0009058: biosynthetic process	4.53E-02
132	GO:0009845: seed germination	4.61E-02

Rank	GO Term	Adjusted P value
1	GO:0102580: cyanidin 3-O-glucoside 2-O''-xylosyltransferase activity	0.00E+00
2	GO:0045486: naringenin 3-dioxygenase activity	0.00E+00
3	GO:1990055: phenylacetaldehyde synthase activity	0.00E+00
4	GO:0044318: L-aspartate:fumarate oxidoreductase activity	0.00E+00
5	GO:0008734: L-aspartate oxidase activity	0.00E+00
6	GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity	0.00E+00
7	GO:0047213: anthocyanidin 3-O-glucosyltransferase activity	0.00E+00
8	GO:0016161: beta-amylase activity	2.38E-07
9	GO:0045430: chalcone isomerase activity	9.95E-06
10	GO:0102229: amylopectin maltohydrolase activity	2.49E-05
11	GO:0046982: protein heterodimerization activity	2.90E-05
12	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.50E-05
13	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.50E-05
14	GO:0016757: transferase activity, transferring glycosyl groups	5.01E-05
15	GO:0004837: tyrosine decarboxylase activity	1.06E-04
16	GO:0003987: acetate-CoA ligase activity	1.06E-04
17	GO:0047760: butyrate-CoA ligase activity	1.06E-04
18	GO:0008194: UDP-glycosyltransferase activity	1.76E-04
19	GO:0004566: beta-glucuronidase activity	2.48E-04
20	GO:0044390: ubiquitin-like protein conjugating enzyme binding	2.48E-04
21	GO:0016868: intramolecular transferase activity, phosphotransferases	2.48E-04
22	GO:0008460: dTDP-glucose 4,6-dehydratase activity	2.48E-04
23	GO:0003839: gamma-glutamylcyclotransferase activity	2.48E-04
24	GO:0010280: UDP-L-rhamnose synthase activity	2.48E-04
25	GO:0050377: UDP-glucose 4,6-dehydratase activity	2.48E-04
26	GO:0004106: chorismate mutase activity	2.48E-04
27	GO:0004614: phosphoglucomutase activity	2.48E-04
28	GO:0031418: L-ascorbic acid binding	3.49E-04
29	GO:0004478: methionine adenosyltransferase activity	4.12E-04
30	GO:0042781: 3'-tRNA processing endoribonuclease activity	4.12E-04
31	GO:0008253: 5'-nucleotidase activity	4.12E-04
32	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	5.92E-04
33	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	7.86E-04
34	GO:0098599: palmitoyl hydrolase activity	7.86E-04
35	GO:0046527: glucosyltransferase activity	7.86E-04
36	GO:0031386: protein tag	9.92E-04
37	GO:0045431: flavonol synthase activity	9.92E-04
38	GO:0016759: cellulose synthase activity	1.01E-03
39	GO:0016462: pyrophosphatase activity	1.21E-03
40	GO:0035252: UDP-xylosyltransferase activity	1.21E-03
41	GO:0016688: L-ascorbate peroxidase activity	1.21E-03
42	GO:0008474: palmitoyl-(protein) hydrolase activity	1.21E-03
43	GO:0008429: phosphatidylethanolamine binding	1.21E-03
44	GO:0016208: AMP binding	1.21E-03
45	GO:0008195: phosphatidate phosphatase activity	1.45E-03
46	GO:0102425: myricetin 3-O-glucosyltransferase activity	1.70E-03
47	GO:0102360: daphnetin 3-O-glucosyltransferase activity	1.70E-03
48	GO:0004427: inorganic diphosphatase activity	1.70E-03
49	GO:0016621: cinnamoyl-CoA reductase activity	1.70E-03
50	GO:0047893: flavonol 3-O-glucosyltransferase activity	1.97E-03
51	GO:0004430: 1-phosphatidylinositol 4-kinase activity	2.24E-03
52	GO:0016207: 4-coumarate-CoA ligase activity	2.53E-03
53	GO:0009672: auxin:proton symporter activity	2.84E-03
54	GO:0047372: acylglycerol lipase activity	3.47E-03
55	GO:0004860: protein kinase inhibitor activity	3.47E-03
56	GO:0010329: auxin efflux transmembrane transporter activity	4.16E-03
57	GO:0003714: transcription corepressor activity	5.65E-03
58	GO:0035251: UDP-glucosyltransferase activity	6.46E-03
59	GO:0004176: ATP-dependent peptidase activity	6.46E-03
60	GO:0030170: pyridoxal phosphate binding	6.59E-03
61	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	6.76E-03
62	GO:0043565: sequence-specific DNA binding	6.92E-03
63	GO:0016853: isomerase activity	9.58E-03
64	GO:0004197: cysteine-type endopeptidase activity	1.11E-02
65	GO:0000287: magnesium ion binding	1.25E-02
66	GO:0008483: transaminase activity	1.26E-02
67	GO:0008237: metallopeptidase activity	1.26E-02
68	GO:0008375: acetylglucosaminyltransferase activity	1.48E-02
69	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.54E-02
70	GO:0102483: scopolin beta-glucosidase activity	1.54E-02
71	GO:0004222: metalloendopeptidase activity	1.77E-02
72	GO:0042803: protein homodimerization activity	1.98E-02
73	GO:0008422: beta-glucosidase activity	2.08E-02
74	GO:0003824: catalytic activity	2.45E-02
75	GO:0051537: 2 iron, 2 sulfur cluster binding	2.47E-02
76	GO:0009055: electron carrier activity	2.50E-02
77	GO:0003690: double-stranded DNA binding	2.97E-02
78	GO:0016491: oxidoreductase activity	3.07E-02
79	GO:0003777: microtubule motor activity	3.11E-02
80	GO:0045330: aspartyl esterase activity	3.11E-02
81	GO:0008234: cysteine-type peptidase activity	3.11E-02
82	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.33E-02
83	GO:0016874: ligase activity	3.56E-02
84	GO:0030599: pectinesterase activity	3.56E-02
85	GO:0016887: ATPase activity	3.61E-02
86	GO:0051082: unfolded protein binding	3.72E-02
87	GO:0015035: protein disulfide oxidoreductase activity	3.80E-02
88	GO:0016758: transferase activity, transferring hexosyl groups	4.28E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	2.45E-04
2	GO:0042406: extrinsic component of endoplasmic reticulum membrane	4.12E-04
3	GO:0036513: Derlin-1 retrotranslocation complex	5.92E-04
4	GO:0043231: intracellular membrane-bounded organelle	8.88E-04
5	GO:0005765: lysosomal membrane	3.47E-03
6	GO:0009574: preprophase band	4.16E-03
7	GO:0005764: lysosome	4.52E-03
8	GO:0043234: protein complex	5.26E-03
9	GO:0009536: plastid	7.21E-03
10	GO:0000790: nuclear chromatin	8.19E-03
11	GO:0005871: kinesin complex	8.19E-03
12	GO:0000785: chromatin	1.11E-02
13	GO:0009570: chloroplast stroma	1.12E-02
14	GO:0071944: cell periphery	1.16E-02
15	GO:0010319: stromule	1.26E-02
16	GO:0005783: endoplasmic reticulum	1.27E-02
17	GO:0031225: anchored component of membrane	1.57E-02
18	GO:0000786: nucleosome	1.89E-02
19	GO:0005737: cytoplasm	2.78E-02
20	GO:0000139: Golgi membrane	3.18E-02
21	GO:0005774: vacuolar membrane	3.40E-02
22	GO:0010287: plastoglobule	4.20E-02
23	GO:0005623: cell	4.45E-02