gene detail

Gene description

TAIR ID: AT1G48920

Short description: nucleolin like 1

Pathogen responsiveness: -2.09

General responsiveness: -1.05

Orthologous

Rice:

OS08G0192900 OS12G0136200 OS11G0250000

Maize:

GRMZM2G131943 GRMZM2G435248

Wheat: No orthologous gene

GO biological process

endonucleolytic cleavage involved in rRNA processing, rRNA processing, root development, cotyledon vascular tissue pattern formation, ribosome biogenesis, petal vascular tissue pattern formation, leaf vascular tissue pattern formation, sepal vascular tissue pattern formation, leaf development, shoot system development

GO cellular component

nucleolus, mitochondrion

GO molecular function

DNA binding

Protein domain

Pfam	PF00076, RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
SMART	SM00360, RRM

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 7

click to view PPI network

Coexpression network

GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE11807	Col, WT, water 4 h	Col, WT, Flg22 4 h	1.66	4.79E-02
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.03	2.68E-04
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.60	3.41E-02