GO Enrichment Analysis of Co-expressed Genes with
AT1G48920
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 2 | GO:0071433: cell wall repair | 0.00E+00 |
| 3 | GO:0000494: box C/D snoRNA 3'-end processing | 0.00E+00 |
| 4 | GO:1904874: positive regulation of telomerase RNA localization to Cajal body | 0.00E+00 |
| 5 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 6 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 7 | GO:0031564: transcription antitermination | 0.00E+00 |
| 8 | GO:1990258: histone glutamine methylation | 0.00E+00 |
| 9 | GO:0006364: rRNA processing | 8.84E-08 |
| 10 | GO:0045041: protein import into mitochondrial intermembrane space | 1.70E-07 |
| 11 | GO:0031167: rRNA methylation | 5.18E-06 |
| 12 | GO:0046686: response to cadmium ion | 9.63E-06 |
| 13 | GO:0006458: 'de novo' protein folding | 1.16E-05 |
| 14 | GO:0042026: protein refolding | 1.16E-05 |
| 15 | GO:0001510: RNA methylation | 2.72E-05 |
| 16 | GO:0031120: snRNA pseudouridine synthesis | 5.34E-05 |
| 17 | GO:0031118: rRNA pseudouridine synthesis | 5.34E-05 |
| 18 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.30E-04 |
| 19 | GO:0061077: chaperone-mediated protein folding | 1.67E-04 |
| 20 | GO:0007005: mitochondrion organization | 1.84E-04 |
| 21 | GO:0006954: inflammatory response | 2.22E-04 |
| 22 | GO:0045039: protein import into mitochondrial inner membrane | 2.22E-04 |
| 23 | GO:0008033: tRNA processing | 2.60E-04 |
| 24 | GO:0010501: RNA secondary structure unwinding | 2.60E-04 |
| 25 | GO:0010197: polar nucleus fusion | 2.81E-04 |
| 26 | GO:0009113: purine nucleobase biosynthetic process | 3.25E-04 |
| 27 | GO:0007004: telomere maintenance via telomerase | 3.25E-04 |
| 28 | GO:0007276: gamete generation | 3.25E-04 |
| 29 | GO:0006164: purine nucleotide biosynthetic process | 3.25E-04 |
| 30 | GO:0009855: determination of bilateral symmetry | 3.25E-04 |
| 31 | GO:0051131: chaperone-mediated protein complex assembly | 3.25E-04 |
| 32 | GO:0042273: ribosomal large subunit biogenesis | 4.35E-04 |
| 33 | GO:0018279: protein N-linked glycosylation via asparagine | 5.52E-04 |
| 34 | GO:0042254: ribosome biogenesis | 6.58E-04 |
| 35 | GO:0016444: somatic cell DNA recombination | 8.05E-04 |
| 36 | GO:0080186: developmental vegetative growth | 9.40E-04 |
| 37 | GO:0001522: pseudouridine synthesis | 1.08E-03 |
| 38 | GO:0006605: protein targeting | 1.08E-03 |
| 39 | GO:0042255: ribosome assembly | 1.08E-03 |
| 40 | GO:0006189: 'de novo' IMP biosynthetic process | 1.38E-03 |
| 41 | GO:0098656: anion transmembrane transport | 1.38E-03 |
| 42 | GO:0006820: anion transport | 2.06E-03 |
| 43 | GO:0006626: protein targeting to mitochondrion | 2.25E-03 |
| 44 | GO:0051302: regulation of cell division | 3.24E-03 |
| 45 | GO:0006334: nucleosome assembly | 3.46E-03 |
| 46 | GO:0000413: protein peptidyl-prolyl isomerization | 4.60E-03 |
| 47 | GO:0009960: endosperm development | 4.84E-03 |
| 48 | GO:0006635: fatty acid beta-oxidation | 5.60E-03 |
| 49 | GO:0009651: response to salt stress | 8.16E-03 |
| 50 | GO:0016049: cell growth | 8.38E-03 |
| 51 | GO:0010311: lateral root formation | 8.99E-03 |
| 52 | GO:0048527: lateral root development | 9.61E-03 |
| 53 | GO:0010043: response to zinc ion | 9.61E-03 |
| 54 | GO:0009631: cold acclimation | 9.61E-03 |
| 55 | GO:0000724: double-strand break repair via homologous recombination | 9.93E-03 |
| 56 | GO:0008283: cell proliferation | 1.23E-02 |
| 57 | GO:0009744: response to sucrose | 1.23E-02 |
| 58 | GO:0000154: rRNA modification | 1.33E-02 |
| 59 | GO:0009664: plant-type cell wall organization | 1.44E-02 |
| 60 | GO:0009846: pollen germination | 1.44E-02 |
| 61 | GO:0009735: response to cytokinin | 1.51E-02 |
| 62 | GO:0009553: embryo sac development | 1.90E-02 |
| 63 | GO:0009793: embryo development ending in seed dormancy | 1.97E-02 |
| 64 | GO:0006457: protein folding | 2.15E-02 |
| 65 | GO:0009845: seed germination | 2.41E-02 |
| 66 | GO:0006414: translational elongation | 2.47E-02 |
| 67 | GO:0009790: embryo development | 2.55E-02 |
| 68 | GO:0006633: fatty acid biosynthetic process | 2.68E-02 |
| 69 | GO:0006413: translational initiation | 2.73E-02 |
| 70 | GO:0009451: RNA modification | 2.91E-02 |
| 71 | GO:0009617: response to bacterium | 3.25E-02 |
| 72 | GO:0009414: response to water deprivation | 3.28E-02 |
| 73 | GO:0009826: unidimensional cell growth | 3.81E-02 |
| 74 | GO:0006970: response to osmotic stress | 4.12E-02 |
| 75 | GO:0009723: response to ethylene | 4.34E-02 |
| 76 | GO:0009409: response to cold | 4.53E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0001072: transcription antitermination factor activity, RNA binding | 0.00E+00 |
| 2 | GO:0102132: 3-oxo-pimeloyl-[acp] methyl ester reductase activity | 0.00E+00 |
| 3 | GO:1990259: histone-glutamine methyltransferase activity | 0.00E+00 |
| 4 | GO:0016018: cyclosporin A binding | 0.00E+00 |
| 5 | GO:0004637: phosphoribosylamine-glycine ligase activity | 0.00E+00 |
| 6 | GO:0034513: box H/ACA snoRNA binding | 0.00E+00 |
| 7 | GO:0004316: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity | 0.00E+00 |
| 8 | GO:0030515: snoRNA binding | 3.33E-13 |
| 9 | GO:0003723: RNA binding | 5.30E-08 |
| 10 | GO:0008649: rRNA methyltransferase activity | 6.57E-07 |
| 11 | GO:0003746: translation elongation factor activity | 1.19E-06 |
| 12 | GO:0042134: rRNA primary transcript binding | 5.34E-05 |
| 13 | GO:0044183: protein binding involved in protein folding | 5.99E-05 |
| 14 | GO:0005507: copper ion binding | 1.14E-04 |
| 15 | GO:0043021: ribonucleoprotein complex binding | 1.30E-04 |
| 16 | GO:0070034: telomerase RNA binding | 1.30E-04 |
| 17 | GO:0051082: unfolded protein binding | 1.77E-04 |
| 18 | GO:0008026: ATP-dependent helicase activity | 1.92E-04 |
| 19 | GO:0070180: large ribosomal subunit rRNA binding | 2.22E-04 |
| 20 | GO:0000166: nucleotide binding | 4.52E-04 |
| 21 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 5.52E-04 |
| 22 | GO:0004004: ATP-dependent RNA helicase activity | 5.86E-04 |
| 23 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 6.76E-04 |
| 24 | GO:0031369: translation initiation factor binding | 6.76E-04 |
| 25 | GO:0015288: porin activity | 1.08E-03 |
| 26 | GO:0008135: translation factor activity, RNA binding | 1.23E-03 |
| 27 | GO:0008308: voltage-gated anion channel activity | 1.23E-03 |
| 28 | GO:0003735: structural constituent of ribosome | 3.70E-03 |
| 29 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 8.68E-03 |
| 30 | GO:0005524: ATP binding | 9.30E-03 |
| 31 | GO:0003924: GTPase activity | 9.31E-03 |
| 32 | GO:0050897: cobalt ion binding | 9.61E-03 |
| 33 | GO:0003697: single-stranded DNA binding | 1.02E-02 |
| 34 | GO:0042393: histone binding | 1.12E-02 |
| 35 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.37E-02 |
| 36 | GO:0051287: NAD binding | 1.40E-02 |
| 37 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.51E-02 |
| 38 | GO:0003690: double-stranded DNA binding | 1.55E-02 |
| 39 | GO:0004386: helicase activity | 2.07E-02 |
| 40 | GO:0008565: protein transporter activity | 2.59E-02 |
| 41 | GO:0005525: GTP binding | 2.73E-02 |
| 42 | GO:0003743: translation initiation factor activity | 3.20E-02 |
| 43 | GO:0003682: chromatin binding | 4.07E-02 |
| 44 | GO:0003729: mRNA binding | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034457: Mpp10 complex | 0.00E+00 |
| 2 | GO:0090661: box H/ACA telomerase RNP complex | 0.00E+00 |
| 3 | GO:0019034: viral replication complex | 0.00E+00 |
| 4 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 5 | GO:0072589: box H/ACA scaRNP complex | 0.00E+00 |
| 6 | GO:0005730: nucleolus | 4.23E-13 |
| 7 | GO:0015030: Cajal body | 1.50E-09 |
| 8 | GO:0032040: small-subunit processome | 4.56E-09 |
| 9 | GO:0031428: box C/D snoRNP complex | 2.52E-08 |
| 10 | GO:0005774: vacuolar membrane | 1.23E-07 |
| 11 | GO:0005739: mitochondrion | 7.68E-06 |
| 12 | GO:0071541: eukaryotic translation initiation factor 3 complex, eIF3m | 5.34E-05 |
| 13 | GO:0005773: vacuole | 5.60E-05 |
| 14 | GO:0070545: PeBoW complex | 1.30E-04 |
| 15 | GO:0005747: mitochondrial respiratory chain complex I | 1.43E-04 |
| 16 | GO:0031429: box H/ACA snoRNP complex | 3.25E-04 |
| 17 | GO:0005759: mitochondrial matrix | 3.27E-04 |
| 18 | GO:0008250: oligosaccharyltransferase complex | 5.52E-04 |
| 19 | GO:0016363: nuclear matrix | 8.05E-04 |
| 20 | GO:0005762: mitochondrial large ribosomal subunit | 8.05E-04 |
| 21 | GO:0030687: preribosome, large subunit precursor | 9.40E-04 |
| 22 | GO:0046930: pore complex | 1.23E-03 |
| 23 | GO:0005834: heterotrimeric G-protein complex | 1.71E-03 |
| 24 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.88E-03 |
| 25 | GO:0019013: viral nucleocapsid | 2.25E-03 |
| 26 | GO:0043234: protein complex | 2.83E-03 |
| 27 | GO:0005758: mitochondrial intermembrane space | 3.03E-03 |
| 28 | GO:0005741: mitochondrial outer membrane | 3.46E-03 |
| 29 | GO:0005829: cytosol | 3.61E-03 |
| 30 | GO:0016592: mediator complex | 5.86E-03 |
| 31 | GO:0005743: mitochondrial inner membrane | 8.66E-03 |
| 32 | GO:0009536: plastid | 8.81E-03 |
| 33 | GO:0009505: plant-type cell wall | 9.06E-03 |
| 34 | GO:0015934: large ribosomal subunit | 9.61E-03 |
| 35 | GO:0005618: cell wall | 1.05E-02 |
| 36 | GO:0009941: chloroplast envelope | 1.36E-02 |
| 37 | GO:0005635: nuclear envelope | 1.59E-02 |
| 38 | GO:0005732: small nucleolar ribonucleoprotein complex | 2.07E-02 |
| 39 | GO:0009506: plasmodesma | 2.17E-02 |
| 40 | GO:0005623: cell | 2.32E-02 |
| 41 | GO:0005840: ribosome | 3.52E-02 |
| 42 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 4.18E-02 |
| 43 | GO:0016020: membrane | 4.22E-02 |
| 44 | GO:0022625: cytosolic large ribosomal subunit | 4.73E-02 |