GO Enrichment Analysis of Co-expressed Genes with
AT1G48920
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0002191: cap-dependent translational initiation | 0.00E+00 |
| 2 | GO:0017126: nucleologenesis | 0.00E+00 |
| 3 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 4 | GO:0031564: transcription antitermination | 0.00E+00 |
| 5 | GO:0042273: ribosomal large subunit biogenesis | 2.92E-06 |
| 6 | GO:0000380: alternative mRNA splicing, via spliceosome | 4.94E-06 |
| 7 | GO:0010501: RNA secondary structure unwinding | 6.43E-06 |
| 8 | GO:0060321: acceptance of pollen | 2.60E-05 |
| 9 | GO:0034620: cellular response to unfolded protein | 5.18E-05 |
| 10 | GO:0031338: regulation of vesicle fusion | 5.18E-05 |
| 11 | GO:0043687: post-translational protein modification | 5.18E-05 |
| 12 | GO:0019673: GDP-mannose metabolic process | 5.18E-05 |
| 13 | GO:0034398: telomere tethering at nuclear periphery | 1.27E-04 |
| 14 | GO:0006406: mRNA export from nucleus | 1.30E-04 |
| 15 | GO:0042351: 'de novo' GDP-L-fucose biosynthetic process | 2.17E-04 |
| 16 | GO:0090630: activation of GTPase activity | 2.17E-04 |
| 17 | GO:0051601: exocyst localization | 3.17E-04 |
| 18 | GO:0000973: posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery | 3.17E-04 |
| 19 | GO:0043207: response to external biotic stimulus | 3.17E-04 |
| 20 | GO:0010971: positive regulation of G2/M transition of mitotic cell cycle | 3.17E-04 |
| 21 | GO:0051781: positive regulation of cell division | 4.24E-04 |
| 22 | GO:0018279: protein N-linked glycosylation via asparagine | 5.39E-04 |
| 23 | GO:0001731: formation of translation preinitiation complex | 6.60E-04 |
| 24 | GO:0006751: glutathione catabolic process | 6.60E-04 |
| 25 | GO:0016070: RNA metabolic process | 6.60E-04 |
| 26 | GO:0006970: response to osmotic stress | 6.72E-04 |
| 27 | GO:0010119: regulation of stomatal movement | 7.17E-04 |
| 28 | GO:0010043: response to zinc ion | 7.17E-04 |
| 29 | GO:0045087: innate immune response | 7.83E-04 |
| 30 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 7.87E-04 |
| 31 | GO:0009423: chorismate biosynthetic process | 7.87E-04 |
| 32 | GO:0006886: intracellular protein transport | 1.04E-03 |
| 33 | GO:0032508: DNA duplex unwinding | 1.06E-03 |
| 34 | GO:0006491: N-glycan processing | 1.06E-03 |
| 35 | GO:0006875: cellular metal ion homeostasis | 1.06E-03 |
| 36 | GO:0006364: rRNA processing | 1.32E-03 |
| 37 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 1.67E-03 |
| 38 | GO:0009073: aromatic amino acid family biosynthetic process | 1.84E-03 |
| 39 | GO:0006913: nucleocytoplasmic transport | 1.84E-03 |
| 40 | GO:0009651: response to salt stress | 1.88E-03 |
| 41 | GO:0009409: response to cold | 1.95E-03 |
| 42 | GO:0000266: mitochondrial fission | 2.01E-03 |
| 43 | GO:0010102: lateral root morphogenesis | 2.19E-03 |
| 44 | GO:0006446: regulation of translational initiation | 2.38E-03 |
| 45 | GO:0034605: cellular response to heat | 2.38E-03 |
| 46 | GO:0009969: xyloglucan biosynthetic process | 2.56E-03 |
| 47 | GO:0009790: embryo development | 2.70E-03 |
| 48 | GO:0006413: translational initiation | 2.97E-03 |
| 49 | GO:0006825: copper ion transport | 3.16E-03 |
| 50 | GO:0051302: regulation of cell division | 3.16E-03 |
| 51 | GO:0035428: hexose transmembrane transport | 3.59E-03 |
| 52 | GO:0070417: cellular response to cold | 4.26E-03 |
| 53 | GO:0051028: mRNA transport | 4.26E-03 |
| 54 | GO:0000413: protein peptidyl-prolyl isomerization | 4.49E-03 |
| 55 | GO:0006606: protein import into nucleus | 4.49E-03 |
| 56 | GO:0042391: regulation of membrane potential | 4.49E-03 |
| 57 | GO:0046323: glucose import | 4.72E-03 |
| 58 | GO:0048544: recognition of pollen | 4.96E-03 |
| 59 | GO:0032502: developmental process | 5.71E-03 |
| 60 | GO:0009414: response to water deprivation | 6.29E-03 |
| 61 | GO:0001666: response to hypoxia | 7.04E-03 |
| 62 | GO:0048573: photoperiodism, flowering | 7.88E-03 |
| 63 | GO:0009910: negative regulation of flower development | 9.36E-03 |
| 64 | GO:0009631: cold acclimation | 9.36E-03 |
| 65 | GO:0006810: transport | 1.06E-02 |
| 66 | GO:0006887: exocytosis | 1.13E-02 |
| 67 | GO:0009873: ethylene-activated signaling pathway | 1.16E-02 |
| 68 | GO:0009744: response to sucrose | 1.19E-02 |
| 69 | GO:0008643: carbohydrate transport | 1.26E-02 |
| 70 | GO:0009846: pollen germination | 1.40E-02 |
| 71 | GO:0009735: response to cytokinin | 1.46E-02 |
| 72 | GO:0006417: regulation of translation | 1.58E-02 |
| 73 | GO:0009553: embryo sac development | 1.85E-02 |
| 74 | GO:0009624: response to nematode | 1.89E-02 |
| 75 | GO:0018105: peptidyl-serine phosphorylation | 1.93E-02 |
| 76 | GO:0051726: regulation of cell cycle | 1.97E-02 |
| 77 | GO:0006457: protein folding | 2.07E-02 |
| 78 | GO:0009845: seed germination | 2.35E-02 |
| 79 | GO:0007623: circadian rhythm | 2.79E-02 |
| 80 | GO:0010228: vegetative to reproductive phase transition of meristem | 2.88E-02 |
| 81 | GO:0009617: response to bacterium | 3.17E-02 |
| 82 | GO:0009826: unidimensional cell growth | 3.71E-02 |
| 83 | GO:0009860: pollen tube growth | 4.02E-02 |
| 84 | GO:0007049: cell cycle | 4.12E-02 |
| 85 | GO:0009723: response to ethylene | 4.23E-02 |
| 86 | GO:0046777: protein autophosphorylation | 4.66E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098808: mRNA cap binding | 0.00E+00 |
| 2 | GO:0001072: transcription antitermination factor activity, RNA binding | 0.00E+00 |
| 3 | GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity | 0.00E+00 |
| 4 | GO:0003723: RNA binding | 4.41E-07 |
| 5 | GO:0004576: oligosaccharyl transferase activity | 2.92E-06 |
| 6 | GO:0017151: DEAD/H-box RNA helicase binding | 5.18E-05 |
| 7 | GO:0008446: GDP-mannose 4,6-dehydratase activity | 5.18E-05 |
| 8 | GO:0003729: mRNA binding | 7.05E-05 |
| 9 | GO:0004839: ubiquitin activating enzyme activity | 1.27E-04 |
| 10 | GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity | 1.27E-04 |
| 11 | GO:0019829: cation-transporting ATPase activity | 2.17E-04 |
| 12 | GO:0070181: small ribosomal subunit rRNA binding | 2.17E-04 |
| 13 | GO:0004737: pyruvate decarboxylase activity | 4.24E-04 |
| 14 | GO:0008641: small protein activating enzyme activity | 5.39E-04 |
| 15 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 5.39E-04 |
| 16 | GO:0017137: Rab GTPase binding | 5.39E-04 |
| 17 | GO:0004004: ATP-dependent RNA helicase activity | 5.66E-04 |
| 18 | GO:0030976: thiamine pyrophosphate binding | 6.60E-04 |
| 19 | GO:0003676: nucleic acid binding | 6.65E-04 |
| 20 | GO:0003697: single-stranded DNA binding | 7.83E-04 |
| 21 | GO:0003950: NAD+ ADP-ribosyltransferase activity | 7.87E-04 |
| 22 | GO:0005516: calmodulin binding | 7.93E-04 |
| 23 | GO:0008143: poly(A) binding | 9.18E-04 |
| 24 | GO:0016831: carboxy-lyase activity | 9.18E-04 |
| 25 | GO:0030515: snoRNA binding | 9.18E-04 |
| 26 | GO:0043022: ribosome binding | 1.06E-03 |
| 27 | GO:0017056: structural constituent of nuclear pore | 1.06E-03 |
| 28 | GO:0015288: porin activity | 1.06E-03 |
| 29 | GO:0005337: nucleoside transmembrane transporter activity | 1.06E-03 |
| 30 | GO:0005375: copper ion transmembrane transporter activity | 1.20E-03 |
| 31 | GO:0003690: double-stranded DNA binding | 1.37E-03 |
| 32 | GO:0005487: nucleocytoplasmic transporter activity | 1.50E-03 |
| 33 | GO:0008026: ATP-dependent helicase activity | 1.97E-03 |
| 34 | GO:0008139: nuclear localization sequence binding | 2.19E-03 |
| 35 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 2.19E-03 |
| 36 | GO:0030552: cAMP binding | 2.56E-03 |
| 37 | GO:0030553: cGMP binding | 2.56E-03 |
| 38 | GO:0000166: nucleotide binding | 2.66E-03 |
| 39 | GO:0005216: ion channel activity | 3.16E-03 |
| 40 | GO:0051087: chaperone binding | 3.16E-03 |
| 41 | GO:0003743: translation initiation factor activity | 3.71E-03 |
| 42 | GO:0008514: organic anion transmembrane transporter activity | 4.03E-03 |
| 43 | GO:0005249: voltage-gated potassium channel activity | 4.49E-03 |
| 44 | GO:0030551: cyclic nucleotide binding | 4.49E-03 |
| 45 | GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity | 4.72E-03 |
| 46 | GO:0005355: glucose transmembrane transporter activity | 4.96E-03 |
| 47 | GO:0016791: phosphatase activity | 6.23E-03 |
| 48 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 7.59E-03 |
| 49 | GO:0004721: phosphoprotein phosphatase activity | 7.88E-03 |
| 50 | GO:0004683: calmodulin-dependent protein kinase activity | 7.88E-03 |
| 51 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 8.46E-03 |
| 52 | GO:0005096: GTPase activator activity | 8.76E-03 |
| 53 | GO:0030145: manganese ion binding | 9.36E-03 |
| 54 | GO:0008422: beta-glucosidase activity | 1.06E-02 |
| 55 | GO:0000149: SNARE binding | 1.06E-02 |
| 56 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.33E-02 |
| 57 | GO:0015171: amino acid transmembrane transporter activity | 1.58E-02 |
| 58 | GO:0005524: ATP binding | 1.97E-02 |
| 59 | GO:0004386: helicase activity | 2.01E-02 |
| 60 | GO:0005507: copper ion binding | 2.28E-02 |
| 61 | GO:0015144: carbohydrate transmembrane transporter activity | 2.52E-02 |
| 62 | GO:0005351: sugar:proton symporter activity | 2.75E-02 |
| 63 | GO:0005509: calcium ion binding | 2.99E-02 |
| 64 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 3.31E-02 |
| 65 | GO:0005215: transporter activity | 3.58E-02 |
| 66 | GO:0000287: magnesium ion binding | 3.76E-02 |
| 67 | GO:0005515: protein binding | 3.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019034: viral replication complex | 0.00E+00 |
| 2 | GO:0005850: eukaryotic translation initiation factor 2 complex | 0.00E+00 |
| 3 | GO:0033290: eukaryotic 48S preinitiation complex | 1.10E-05 |
| 4 | GO:0030687: preribosome, large subunit precursor | 1.52E-05 |
| 5 | GO:0043614: multi-eIF complex | 5.18E-05 |
| 6 | GO:0032040: small-subunit processome | 6.74E-05 |
| 7 | GO:0005783: endoplasmic reticulum | 1.13E-04 |
| 8 | GO:0044614: nuclear pore cytoplasmic filaments | 2.17E-04 |
| 9 | GO:0005794: Golgi apparatus | 3.88E-04 |
| 10 | GO:0008250: oligosaccharyltransferase complex | 5.39E-04 |
| 11 | GO:0005730: nucleolus | 5.69E-04 |
| 12 | GO:0009506: plasmodesma | 6.13E-04 |
| 13 | GO:0016282: eukaryotic 43S preinitiation complex | 6.60E-04 |
| 14 | GO:0005851: eukaryotic translation initiation factor 2B complex | 6.60E-04 |
| 15 | GO:0016363: nuclear matrix | 7.87E-04 |
| 16 | GO:0034399: nuclear periphery | 1.06E-03 |
| 17 | GO:0005829: cytosol | 1.22E-03 |
| 18 | GO:0005680: anaphase-promoting complex | 1.35E-03 |
| 19 | GO:0010494: cytoplasmic stress granule | 1.35E-03 |
| 20 | GO:0043234: protein complex | 2.76E-03 |
| 21 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 4.03E-03 |
| 22 | GO:0031965: nuclear membrane | 5.21E-03 |
| 23 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 5.38E-03 |
| 24 | GO:0000145: exocyst | 5.71E-03 |
| 25 | GO:0005774: vacuolar membrane | 8.09E-03 |
| 26 | GO:0005856: cytoskeleton | 1.30E-02 |
| 27 | GO:0005635: nuclear envelope | 1.55E-02 |
| 28 | GO:0005777: peroxisome | 1.83E-02 |
| 29 | GO:0012505: endomembrane system | 1.85E-02 |
| 30 | GO:0005732: small nucleolar ribonucleoprotein complex | 2.01E-02 |
| 31 | GO:0009524: phragmoplast | 2.31E-02 |
| 32 | GO:0005802: trans-Golgi network | 2.56E-02 |
| 33 | GO:0009705: plant-type vacuole membrane | 2.79E-02 |
| 34 | GO:0005622: intracellular | 2.84E-02 |
| 35 | GO:0005768: endosome | 2.91E-02 |
| 36 | GO:0048046: apoplast | 3.31E-02 |
| 37 | GO:0005618: cell wall | 3.68E-02 |
| 38 | GO:0022625: cytosolic large ribosomal subunit | 4.60E-02 |