gene detail

Gene description

TAIR ID: AT1G48480

Short description: receptor-like kinase 1

Pathogen responsiveness: 0.14

General responsiveness: -0.46

Orthologous

Rice: No orthologous gene

Maize:

AC233893.1_FGT006

Wheat: No orthologous gene

GO biological process

transmembrane receptor protein tyrosine kinase signaling pathway, protein phosphorylation

GO cellular component

vacuolar membrane, plasma membrane, plasmodesma, integral component of membrane

GO molecular function

protein kinase activity, protein serine/threonine kinase activity, ATP binding, kinase activity

Protein domain

Pfam	PF13855, Leucine rich repeat
Pfam	PF07714, Protein tyrosine kinase
Pfam	PF08263, Leucine rich repeat N-terminal domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260, AT5G61850, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 6

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

26 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-2.54	2.52E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-3.32	1.40E-06
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-2.86	8.53E-06
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.78	1.71E-10
GSE20278	Col, RPL18-HF, control	Col, RPL18-HF, TuMV 10 d	-1.68	2.84E-02
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-2.11	7.54E-04
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-2.53	1.55E-04
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-1.51	6.50E-09
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-1.86	1.00E-09
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.54	6.10E-09
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-1.85	3.85E-10
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-2.01	1.23E-10
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.89	2.30E-10
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.80	8.56E-11
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-2.15	1.98E-12
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-2.44	1.05E-04
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	-2.64	1.12E-04
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-2.03	9.44E-05
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-1.67	7.47E-06
GSE56094	Col, WT, control 10 h	Col, WT, hrpA- 10 h	-1.55	9.44E-05
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	-2.09	4.84E-08
GSE56094	Col, WT, control 11 h	Col, WT, hrpA- 11 h	-1.80	5.31E-06
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-2.84	1.95E-12
GSE56094	Col, WT, control 12 h	Col, WT, hrpA- 12 h	-1.91	6.95E-06
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-2.18	1.08E-08
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	-1.57	4.44E-05