GO Enrichment Analysis of Co-expressed Genes with
AT1G48480
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 2 | GO:0015976: carbon utilization | 3.69E-06 |
| 3 | GO:0042742: defense response to bacterium | 4.12E-05 |
| 4 | GO:0010442: guard cell morphogenesis | 5.94E-05 |
| 5 | GO:0060627: regulation of vesicle-mediated transport | 5.94E-05 |
| 6 | GO:0006631: fatty acid metabolic process | 7.53E-05 |
| 7 | GO:0010424: DNA methylation on cytosine within a CG sequence | 1.44E-04 |
| 8 | GO:0052541: plant-type cell wall cellulose metabolic process | 1.44E-04 |
| 9 | GO:0006695: cholesterol biosynthetic process | 1.44E-04 |
| 10 | GO:0010069: zygote asymmetric cytokinesis in embryo sac | 1.44E-04 |
| 11 | GO:0006065: UDP-glucuronate biosynthetic process | 2.46E-04 |
| 12 | GO:0019722: calcium-mediated signaling | 2.55E-04 |
| 13 | GO:0010583: response to cyclopentenone | 4.26E-04 |
| 14 | GO:2000122: negative regulation of stomatal complex development | 4.78E-04 |
| 15 | GO:0010037: response to carbon dioxide | 4.78E-04 |
| 16 | GO:0006085: acetyl-CoA biosynthetic process | 4.78E-04 |
| 17 | GO:0009735: response to cytokinin | 4.91E-04 |
| 18 | GO:0007267: cell-cell signaling | 5.12E-04 |
| 19 | GO:0006796: phosphate-containing compound metabolic process | 7.40E-04 |
| 20 | GO:1901259: chloroplast rRNA processing | 8.82E-04 |
| 21 | GO:0006694: steroid biosynthetic process | 8.82E-04 |
| 22 | GO:0048444: floral organ morphogenesis | 8.82E-04 |
| 23 | GO:0010555: response to mannitol | 8.82E-04 |
| 24 | GO:0009955: adaxial/abaxial pattern specification | 8.82E-04 |
| 25 | GO:0030091: protein repair | 1.18E-03 |
| 26 | GO:0007155: cell adhesion | 1.18E-03 |
| 27 | GO:0009642: response to light intensity | 1.18E-03 |
| 28 | GO:0045454: cell redox homeostasis | 1.25E-03 |
| 29 | GO:0032544: plastid translation | 1.35E-03 |
| 30 | GO:0009808: lignin metabolic process | 1.35E-03 |
| 31 | GO:0033384: geranyl diphosphate biosynthetic process | 1.52E-03 |
| 32 | GO:0048589: developmental growth | 1.52E-03 |
| 33 | GO:0045337: farnesyl diphosphate biosynthetic process | 1.52E-03 |
| 34 | GO:0006349: regulation of gene expression by genetic imprinting | 1.69E-03 |
| 35 | GO:0006949: syncytium formation | 1.88E-03 |
| 36 | GO:0010216: maintenance of DNA methylation | 2.07E-03 |
| 37 | GO:0050826: response to freezing | 2.47E-03 |
| 38 | GO:0009409: response to cold | 2.56E-03 |
| 39 | GO:0009934: regulation of meristem structural organization | 2.68E-03 |
| 40 | GO:0006071: glycerol metabolic process | 3.11E-03 |
| 41 | GO:0046686: response to cadmium ion | 3.17E-03 |
| 42 | GO:0007010: cytoskeleton organization | 3.34E-03 |
| 43 | GO:0019344: cysteine biosynthetic process | 3.34E-03 |
| 44 | GO:0007017: microtubule-based process | 3.57E-03 |
| 45 | GO:0051302: regulation of cell division | 3.57E-03 |
| 46 | GO:0010026: trichome differentiation | 3.57E-03 |
| 47 | GO:0009294: DNA mediated transformation | 4.30E-03 |
| 48 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 4.30E-03 |
| 49 | GO:0042335: cuticle development | 5.07E-03 |
| 50 | GO:0000413: protein peptidyl-prolyl isomerization | 5.07E-03 |
| 51 | GO:0006412: translation | 5.59E-03 |
| 52 | GO:0009826: unidimensional cell growth | 5.65E-03 |
| 53 | GO:0016132: brassinosteroid biosynthetic process | 6.17E-03 |
| 54 | GO:0071554: cell wall organization or biogenesis | 6.17E-03 |
| 55 | GO:0055114: oxidation-reduction process | 7.01E-03 |
| 56 | GO:0009828: plant-type cell wall loosening | 7.05E-03 |
| 57 | GO:0009627: systemic acquired resistance | 8.60E-03 |
| 58 | GO:0009817: defense response to fungus, incompatible interaction | 9.59E-03 |
| 59 | GO:0048767: root hair elongation | 9.93E-03 |
| 60 | GO:0009813: flavonoid biosynthetic process | 9.93E-03 |
| 61 | GO:0009834: plant-type secondary cell wall biogenesis | 1.03E-02 |
| 62 | GO:0010119: regulation of stomatal movement | 1.06E-02 |
| 63 | GO:0009910: negative regulation of flower development | 1.06E-02 |
| 64 | GO:0006629: lipid metabolic process | 1.07E-02 |
| 65 | GO:0006839: mitochondrial transport | 1.24E-02 |
| 66 | GO:0051707: response to other organism | 1.35E-02 |
| 67 | GO:0009664: plant-type cell wall organization | 1.59E-02 |
| 68 | GO:0042538: hyperosmotic salinity response | 1.59E-02 |
| 69 | GO:0048367: shoot system development | 1.93E-02 |
| 70 | GO:0016569: covalent chromatin modification | 2.06E-02 |
| 71 | GO:0006633: fatty acid biosynthetic process | 2.97E-02 |
| 72 | GO:0045490: pectin catabolic process | 3.17E-02 |
| 73 | GO:0009651: response to salt stress | 3.74E-02 |
| 74 | GO:0006979: response to oxidative stress | 3.89E-02 |
| 75 | GO:0042254: ribosome biogenesis | 4.38E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050614: delta24-sterol reductase activity | 0.00E+00 |
| 2 | GO:0051920: peroxiredoxin activity | 5.83E-08 |
| 3 | GO:0016209: antioxidant activity | 1.49E-07 |
| 4 | GO:0019843: rRNA binding | 1.83E-05 |
| 5 | GO:0004560: alpha-L-fucosidase activity | 5.94E-05 |
| 6 | GO:0004089: carbonate dehydratase activity | 9.56E-05 |
| 7 | GO:0005504: fatty acid binding | 2.46E-04 |
| 8 | GO:0003979: UDP-glucose 6-dehydrogenase activity | 2.46E-04 |
| 9 | GO:0070330: aromatase activity | 2.46E-04 |
| 10 | GO:0003878: ATP citrate synthase activity | 3.57E-04 |
| 11 | GO:0045430: chalcone isomerase activity | 4.78E-04 |
| 12 | GO:0005200: structural constituent of cytoskeleton | 5.12E-04 |
| 13 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 5.12E-04 |
| 14 | GO:0018685: alkane 1-monooxygenase activity | 6.05E-04 |
| 15 | GO:0016462: pyrophosphatase activity | 7.40E-04 |
| 16 | GO:0004601: peroxidase activity | 7.67E-04 |
| 17 | GO:0003886: DNA (cytosine-5-)-methyltransferase activity | 8.82E-04 |
| 18 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 8.82E-04 |
| 19 | GO:0102391: decanoate--CoA ligase activity | 8.82E-04 |
| 20 | GO:0004467: long-chain fatty acid-CoA ligase activity | 1.03E-03 |
| 21 | GO:0004427: inorganic diphosphatase activity | 1.03E-03 |
| 22 | GO:0003735: structural constituent of ribosome | 1.04E-03 |
| 23 | GO:0052689: carboxylic ester hydrolase activity | 1.13E-03 |
| 24 | GO:0004337: geranyltranstransferase activity | 1.52E-03 |
| 25 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 1.52E-03 |
| 26 | GO:0004161: dimethylallyltranstransferase activity | 2.07E-03 |
| 27 | GO:0004565: beta-galactosidase activity | 2.47E-03 |
| 28 | GO:0030570: pectate lyase activity | 4.30E-03 |
| 29 | GO:0005199: structural constituent of cell wall | 5.34E-03 |
| 30 | GO:0016788: hydrolase activity, acting on ester bonds | 5.98E-03 |
| 31 | GO:0016413: O-acetyltransferase activity | 7.65E-03 |
| 32 | GO:0004871: signal transducer activity | 9.11E-03 |
| 33 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.06E-02 |
| 34 | GO:0003924: GTPase activity | 1.07E-02 |
| 35 | GO:0003746: translation elongation factor activity | 1.13E-02 |
| 36 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.51E-02 |
| 37 | GO:0051287: NAD binding | 1.55E-02 |
| 38 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.93E-02 |
| 39 | GO:0030599: pectinesterase activity | 2.06E-02 |
| 40 | GO:0016740: transferase activity | 2.33E-02 |
| 41 | GO:0005507: copper ion binding | 2.72E-02 |
| 42 | GO:0005516: calmodulin binding | 2.88E-02 |
| 43 | GO:0005525: GTP binding | 3.14E-02 |
| 44 | GO:0008168: methyltransferase activity | 4.21E-02 |
| 45 | GO:0000287: magnesium ion binding | 4.27E-02 |
| 46 | GO:0003682: chromatin binding | 4.50E-02 |
| 47 | GO:0050660: flavin adenine dinucleotide binding | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0048046: apoplast | 7.42E-12 |
| 2 | GO:0009941: chloroplast envelope | 7.73E-09 |
| 3 | GO:0009505: plant-type cell wall | 3.71E-08 |
| 4 | GO:0009570: chloroplast stroma | 4.75E-08 |
| 5 | GO:0046658: anchored component of plasma membrane | 1.04E-07 |
| 6 | GO:0009579: thylakoid | 6.28E-07 |
| 7 | GO:0031225: anchored component of membrane | 1.55E-06 |
| 8 | GO:0005576: extracellular region | 1.89E-05 |
| 9 | GO:0010319: stromule | 2.17E-05 |
| 10 | GO:0005618: cell wall | 3.56E-05 |
| 11 | GO:0031977: thylakoid lumen | 7.53E-05 |
| 12 | GO:0009535: chloroplast thylakoid membrane | 2.78E-04 |
| 13 | GO:0009543: chloroplast thylakoid lumen | 2.92E-04 |
| 14 | GO:0009346: citrate lyase complex | 3.57E-04 |
| 15 | GO:0009506: plasmodesma | 9.61E-04 |
| 16 | GO:0009533: chloroplast stromal thylakoid | 1.03E-03 |
| 17 | GO:0009507: chloroplast | 1.29E-03 |
| 18 | GO:0045298: tubulin complex | 1.52E-03 |
| 19 | GO:0005763: mitochondrial small ribosomal subunit | 1.52E-03 |
| 20 | GO:0005773: vacuole | 1.57E-03 |
| 21 | GO:0000311: plastid large ribosomal subunit | 2.27E-03 |
| 22 | GO:0005875: microtubule associated complex | 3.11E-03 |
| 23 | GO:0016020: membrane | 4.17E-03 |
| 24 | GO:0009534: chloroplast thylakoid | 4.23E-03 |
| 25 | GO:0005840: ribosome | 8.65E-03 |
| 26 | GO:0005856: cytoskeleton | 1.47E-02 |
| 27 | GO:0022626: cytosolic ribosome | 1.83E-02 |
| 28 | GO:0005886: plasma membrane | 2.31E-02 |
| 29 | GO:0010287: plastoglobule | 2.43E-02 |
| 30 | GO:0005759: mitochondrial matrix | 2.97E-02 |
| 31 | GO:0005802: trans-Golgi network | 3.06E-02 |
| 32 | GO:0005829: cytosol | 3.09E-02 |
| 33 | GO:0005768: endosome | 3.48E-02 |
| 34 | GO:0005774: vacuolar membrane | 3.89E-02 |
| 35 | GO:0009536: plastid | 4.72E-02 |
| 36 | GO:0005874: microtubule | 4.92E-02 |