Gene: AT1G45474
     

Gene description


TAIR ID: AT1G45474

Short description: photosystem I light harvesting complex gene 5

Pathogen responsiveness: -0.11

General responsiveness: 2.59

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G103101  

Wheat: No orthologous gene

GO biological process


protein-chromophore linkage, photosynthesis, light harvesting in photosystem I, response to low light intensity stimulus, response to high light intensity, response to cold


GO cellular component


chloroplast thylakoid membrane, plastoglobule, photosystem I antenna complex, integral component of membrane, chloroplast, chloroplast envelope, light-harvesting complex, membrane


GO molecular function


metal ion binding, protein binding, protein homodimerization activity, chlorophyll binding


Protein domain


PfamPF00504, Chlorophyll A-B binding protein

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT3G14230

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


17 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, ataf1, controlCol, ataf1, Bg h-1.688.23E-08
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.147.08E-11
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.712.14E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.371.07E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.106.54E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.642.11E-13
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.031.22E-03
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.051.49E-04
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-2.353.39E-14
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-1.531.46E-07
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-1.571.40E-07
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-1.714.82E-08
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-1.654.70E-08
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.842.28E-03
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.532.92E-05
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-2.181.48E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h-1.913.75E-03






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