Gene: AT1G30620
     


Gene description


TAIR ID: AT1G30620

Short description: NAD(P)-binding Rossmann-fold superfamily protein

Pathogen responsiveness: 1.69

General responsiveness: 0.10

GO biological process


capsule polysaccharide biosynthetic process, arabinose biosynthetic process, UDP-L-arabinose biosynthetic process, plant-type cell wall biogenesis, galactose metabolic process, nucleotide-sugar metabolic process


GO cellular component


Golgi apparatus, integral component of membrane, Golgi cisterna membrane


GO molecular function


UDP-arabinose 4-epimerase activity, catalytic activity, UDP-glucose 4-epimerase activity


Protein domain


PfamPF16363, GDP-mannose 4,6 dehydratase

Transcriptional regulation


Regulator:
AT1G51600, AT2G38250, AT1G62300, AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


60 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h2.661.97E-08
GSE12856Col, ataf1, controlCol, ataf1, Bg h2.965.57E-09
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-1.911.49E-03
GSE17464Laer, controlLaer, Flg22 1 h2.862.52E-06
GSE17464Laer, controlLaer, Flg22 2 h2.436.03E-05
GSE17464Penta, controlPenta, Flg22 2 h2.793.99E-06
GSE17464Penta, controlPenta, Flg22 2 h2.503.59E-05
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h2.436.12E-06
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h3.223.04E-07
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h2.464.43E-06
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h4.125.72E-10
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h2.471.27E-08
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt21.813.31E-05
GSE40544Col, WT, controlCol, WT, PstDC3000 EV2.144.87E-06
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt21.745.23E-05
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h3.683.96E-15
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.319.76E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h4.002.19E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h3.812.62E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h4.247.39E-16
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h4.148.43E-16
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h3.681.85E-14
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.964.86E-13
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h4.101.52E-15
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h3.171.70E-13
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h2.501.41E-02
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h3.602.81E-04
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h2.113.22E-10
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h2.221.33E-10
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h3.663.86E-06
GSE5520Col, WT, control 10 hCol, WT, Cor- hrpS- 10 h1.932.62E-02
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h2.112.92E-04
GSE5520Col, WT, control 7 hCol, WT, hrpA- 10 h1.624.14E-02
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h3.161.80E-17
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h2.232.14E-09
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h2.474.23E-12
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h2.304.67E-10
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h2.381.71E-11
GSE56094Col, WT, control 12 hCol, WT, hrpA- 12 h1.734.45E-06
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h3.004.05E-16
GSE56094Col, WT, control 4 hCol, WT, PstDC3000 4 h1.561.95E-05
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h1.599.28E-06
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h1.901.36E-07
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h1.912.76E-07
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h2.309.19E-11
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h2.299.52E-10
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h2.187.43E-10
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h1.797.30E-07
GSE5615Col, WT, GST 4 hCol, WT, GST+NPP1 4 h2.243.04E-09
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h2.672.04E-11
GSE5616Col, WT, water 12 hCol, WT, P. infestans 12 h1.957.98E-06
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h3.396.88E-09
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h3.772.94E-02
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 HrpA- 12 h1.841.35E-03
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h2.531.83E-05
GSE6176Col, WT, control 4 hCol, WT, PstDC3000 AvrRpm1 4 h1.537.95E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h2.958.07E-04
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h3.774.09E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h2.552.79E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h3.874.01E-04






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