GO Enrichment Analysis of Co-expressed Genes with
AT1G30620
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0080056: petal vascular tissue pattern formation | 0.00E+00 |
| 2 | GO:0006858: extracellular transport | 0.00E+00 |
| 3 | GO:0080057: sepal vascular tissue pattern formation | 0.00E+00 |
| 4 | GO:0080180: 2-methylguanosine metabolic process | 0.00E+00 |
| 5 | GO:0007141: male meiosis I | 0.00E+00 |
| 6 | GO:0046109: uridine biosynthetic process | 0.00E+00 |
| 7 | GO:0048227: plasma membrane to endosome transport | 0.00E+00 |
| 8 | GO:0006983: ER overload response | 0.00E+00 |
| 9 | GO:2000541: positive regulation of protein geranylgeranylation | 0.00E+00 |
| 10 | GO:0000478: endonucleolytic cleavage involved in rRNA processing | 0.00E+00 |
| 11 | GO:0000188: inactivation of MAPK activity | 0.00E+00 |
| 12 | GO:0080169: cellular response to boron-containing substance deprivation | 0.00E+00 |
| 13 | GO:0006014: D-ribose metabolic process | 6.36E-05 |
| 14 | GO:0006468: protein phosphorylation | 7.03E-05 |
| 15 | GO:1990641: response to iron ion starvation | 1.88E-04 |
| 16 | GO:0006481: C-terminal protein methylation | 1.88E-04 |
| 17 | GO:0035280: miRNA loading onto RISC involved in gene silencing by miRNA | 1.88E-04 |
| 18 | GO:1902065: response to L-glutamate | 1.88E-04 |
| 19 | GO:0010265: SCF complex assembly | 1.88E-04 |
| 20 | GO:0042759: long-chain fatty acid biosynthetic process | 1.88E-04 |
| 21 | GO:0046686: response to cadmium ion | 2.61E-04 |
| 22 | GO:0043069: negative regulation of programmed cell death | 3.21E-04 |
| 23 | GO:0019374: galactolipid metabolic process | 4.24E-04 |
| 24 | GO:0051170: nuclear import | 4.24E-04 |
| 25 | GO:0009727: detection of ethylene stimulus | 4.24E-04 |
| 26 | GO:0006101: citrate metabolic process | 4.24E-04 |
| 27 | GO:0006610: ribosomal protein import into nucleus | 4.24E-04 |
| 28 | GO:0043066: negative regulation of apoptotic process | 4.24E-04 |
| 29 | GO:0042325: regulation of phosphorylation | 4.24E-04 |
| 30 | GO:0019441: tryptophan catabolic process to kynurenine | 4.24E-04 |
| 31 | GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway | 6.92E-04 |
| 32 | GO:1900055: regulation of leaf senescence | 6.92E-04 |
| 33 | GO:2000034: regulation of seed maturation | 6.92E-04 |
| 34 | GO:0016998: cell wall macromolecule catabolic process | 9.07E-04 |
| 35 | GO:0072334: UDP-galactose transmembrane transport | 9.86E-04 |
| 36 | GO:0009399: nitrogen fixation | 9.86E-04 |
| 37 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 9.86E-04 |
| 38 | GO:0033014: tetrapyrrole biosynthetic process | 9.86E-04 |
| 39 | GO:0046513: ceramide biosynthetic process | 9.86E-04 |
| 40 | GO:0010116: positive regulation of abscisic acid biosynthetic process | 9.86E-04 |
| 41 | GO:0006107: oxaloacetate metabolic process | 9.86E-04 |
| 42 | GO:0030433: ubiquitin-dependent ERAD pathway | 9.89E-04 |
| 43 | GO:0022622: root system development | 1.31E-03 |
| 44 | GO:0006734: NADH metabolic process | 1.31E-03 |
| 45 | GO:0006542: glutamine biosynthetic process | 1.31E-03 |
| 46 | GO:0033320: UDP-D-xylose biosynthetic process | 1.31E-03 |
| 47 | GO:0030041: actin filament polymerization | 1.66E-03 |
| 48 | GO:0006097: glyoxylate cycle | 1.66E-03 |
| 49 | GO:0006461: protein complex assembly | 1.66E-03 |
| 50 | GO:0018344: protein geranylgeranylation | 1.66E-03 |
| 51 | GO:0010225: response to UV-C | 1.66E-03 |
| 52 | GO:0019252: starch biosynthetic process | 1.68E-03 |
| 53 | GO:0007264: small GTPase mediated signal transduction | 1.92E-03 |
| 54 | GO:0042732: D-xylose metabolic process | 2.05E-03 |
| 55 | GO:0000060: protein import into nucleus, translocation | 2.05E-03 |
| 56 | GO:1900425: negative regulation of defense response to bacterium | 2.05E-03 |
| 57 | GO:0002238: response to molecule of fungal origin | 2.05E-03 |
| 58 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 2.05E-03 |
| 59 | GO:0006751: glutathione catabolic process | 2.05E-03 |
| 60 | GO:0048232: male gamete generation | 2.05E-03 |
| 61 | GO:0006952: defense response | 2.06E-03 |
| 62 | GO:0006310: DNA recombination | 2.17E-03 |
| 63 | GO:0010555: response to mannitol | 2.46E-03 |
| 64 | GO:2000067: regulation of root morphogenesis | 2.46E-03 |
| 65 | GO:0000338: protein deneddylation | 2.90E-03 |
| 66 | GO:0042773: ATP synthesis coupled electron transport | 2.90E-03 |
| 67 | GO:0006400: tRNA modification | 2.90E-03 |
| 68 | GO:1902074: response to salt | 2.90E-03 |
| 69 | GO:0010150: leaf senescence | 3.16E-03 |
| 70 | GO:1900150: regulation of defense response to fungus | 3.36E-03 |
| 71 | GO:0006102: isocitrate metabolic process | 3.36E-03 |
| 72 | GO:0006644: phospholipid metabolic process | 3.36E-03 |
| 73 | GO:0007166: cell surface receptor signaling pathway | 3.74E-03 |
| 74 | GO:0007186: G-protein coupled receptor signaling pathway | 3.84E-03 |
| 75 | GO:0006303: double-strand break repair via nonhomologous end joining | 3.84E-03 |
| 76 | GO:0006972: hyperosmotic response | 3.84E-03 |
| 77 | GO:0045087: innate immune response | 4.26E-03 |
| 78 | GO:0009821: alkaloid biosynthetic process | 4.35E-03 |
| 79 | GO:0051865: protein autoubiquitination | 4.35E-03 |
| 80 | GO:0006783: heme biosynthetic process | 4.35E-03 |
| 81 | GO:0006607: NLS-bearing protein import into nucleus | 4.35E-03 |
| 82 | GO:0006099: tricarboxylic acid cycle | 4.45E-03 |
| 83 | GO:0000723: telomere maintenance | 4.87E-03 |
| 84 | GO:0010449: root meristem growth | 4.87E-03 |
| 85 | GO:0006897: endocytosis | 5.05E-03 |
| 86 | GO:0051026: chiasma assembly | 5.42E-03 |
| 87 | GO:0006032: chitin catabolic process | 5.42E-03 |
| 88 | GO:0009750: response to fructose | 5.99E-03 |
| 89 | GO:0030148: sphingolipid biosynthetic process | 5.99E-03 |
| 90 | GO:0000038: very long-chain fatty acid metabolic process | 5.99E-03 |
| 91 | GO:0009636: response to toxic substance | 6.15E-03 |
| 92 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 6.63E-03 |
| 93 | GO:0010588: cotyledon vascular tissue pattern formation | 7.19E-03 |
| 94 | GO:0006626: protein targeting to mitochondrion | 7.19E-03 |
| 95 | GO:0006108: malate metabolic process | 7.19E-03 |
| 96 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 7.54E-03 |
| 97 | GO:0010200: response to chitin | 7.54E-03 |
| 98 | GO:0046777: protein autophosphorylation | 7.87E-03 |
| 99 | GO:0010030: positive regulation of seed germination | 8.47E-03 |
| 100 | GO:0009225: nucleotide-sugar metabolic process | 8.47E-03 |
| 101 | GO:0006096: glycolytic process | 8.73E-03 |
| 102 | GO:0048367: shoot system development | 9.02E-03 |
| 103 | GO:0006886: intracellular protein transport | 9.45E-03 |
| 104 | GO:2000377: regulation of reactive oxygen species metabolic process | 9.83E-03 |
| 105 | GO:0007131: reciprocal meiotic recombination | 1.20E-02 |
| 106 | GO:0080092: regulation of pollen tube growth | 1.20E-02 |
| 107 | GO:0071369: cellular response to ethylene stimulus | 1.28E-02 |
| 108 | GO:0006012: galactose metabolic process | 1.28E-02 |
| 109 | GO:0010087: phloem or xylem histogenesis | 1.51E-02 |
| 110 | GO:0010305: leaf vascular tissue pattern formation | 1.60E-02 |
| 111 | GO:0006633: fatty acid biosynthetic process | 1.66E-02 |
| 112 | GO:0042752: regulation of circadian rhythm | 1.68E-02 |
| 113 | GO:0009646: response to absence of light | 1.68E-02 |
| 114 | GO:0040008: regulation of growth | 1.74E-02 |
| 115 | GO:0010183: pollen tube guidance | 1.77E-02 |
| 116 | GO:0009749: response to glucose | 1.77E-02 |
| 117 | GO:0006979: response to oxidative stress | 1.80E-02 |
| 118 | GO:0071554: cell wall organization or biogenesis | 1.85E-02 |
| 119 | GO:0010583: response to cyclopentenone | 1.94E-02 |
| 120 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 2.04E-02 |
| 121 | GO:0009738: abscisic acid-activated signaling pathway | 2.35E-02 |
| 122 | GO:0016310: phosphorylation | 2.36E-02 |
| 123 | GO:0009615: response to virus | 2.41E-02 |
| 124 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 2.51E-02 |
| 125 | GO:0009611: response to wounding | 2.52E-02 |
| 126 | GO:0015031: protein transport | 2.53E-02 |
| 127 | GO:0042128: nitrate assimilation | 2.61E-02 |
| 128 | GO:0015995: chlorophyll biosynthetic process | 2.71E-02 |
| 129 | GO:0006950: response to stress | 2.71E-02 |
| 130 | GO:0030244: cellulose biosynthetic process | 2.91E-02 |
| 131 | GO:0006970: response to osmotic stress | 3.04E-02 |
| 132 | GO:0006499: N-terminal protein myristoylation | 3.12E-02 |
| 133 | GO:0009407: toxin catabolic process | 3.12E-02 |
| 134 | GO:0009631: cold acclimation | 3.23E-02 |
| 135 | GO:0010043: response to zinc ion | 3.23E-02 |
| 136 | GO:0048366: leaf development | 3.33E-02 |
| 137 | GO:0009867: jasmonic acid mediated signaling pathway | 3.45E-02 |
| 138 | GO:0016051: carbohydrate biosynthetic process | 3.45E-02 |
| 139 | GO:0009853: photorespiration | 3.45E-02 |
| 140 | GO:0006839: mitochondrial transport | 3.78E-02 |
| 141 | GO:0006631: fatty acid metabolic process | 3.89E-02 |
| 142 | GO:0009651: response to salt stress | 3.97E-02 |
| 143 | GO:0009640: photomorphogenesis | 4.13E-02 |
| 144 | GO:0009744: response to sucrose | 4.13E-02 |
| 145 | GO:0051707: response to other organism | 4.13E-02 |
| 146 | GO:0045454: cell redox homeostasis | 4.18E-02 |
| 147 | GO:0000209: protein polyubiquitination | 4.24E-02 |
| 148 | GO:0045892: negative regulation of transcription, DNA-templated | 4.25E-02 |
| 149 | GO:0031347: regulation of defense response | 4.73E-02 |
| 150 | GO:0006260: DNA replication | 4.73E-02 |
| 151 | GO:0000165: MAPK cascade | 4.73E-02 |
| 152 | GO:0016042: lipid catabolic process | 5.00E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050220: prostaglandin-E synthase activity | 0.00E+00 |
| 2 | GO:0005092: GDP-dissociation inhibitor activity | 0.00E+00 |
| 3 | GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity | 0.00E+00 |
| 4 | GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity | 0.00E+00 |
| 5 | GO:0004674: protein serine/threonine kinase activity | 2.39E-07 |
| 6 | GO:0005524: ATP binding | 1.61E-06 |
| 7 | GO:0016301: kinase activity | 4.09E-06 |
| 8 | GO:0005093: Rab GDP-dissociation inhibitor activity | 6.26E-06 |
| 9 | GO:0005496: steroid binding | 4.30E-05 |
| 10 | GO:0004747: ribokinase activity | 8.84E-05 |
| 11 | GO:0008865: fructokinase activity | 1.51E-04 |
| 12 | GO:0004325: ferrochelatase activity | 1.88E-04 |
| 13 | GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity | 1.88E-04 |
| 14 | GO:0019707: protein-cysteine S-acyltransferase activity | 1.88E-04 |
| 15 | GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity | 1.88E-04 |
| 16 | GO:0030955: potassium ion binding | 2.73E-04 |
| 17 | GO:0004743: pyruvate kinase activity | 2.73E-04 |
| 18 | GO:0050736: O-malonyltransferase activity | 4.24E-04 |
| 19 | GO:0045140: inositol phosphoceramide synthase activity | 4.24E-04 |
| 20 | GO:0004061: arylformamidase activity | 4.24E-04 |
| 21 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 4.24E-04 |
| 22 | GO:0015036: disulfide oxidoreductase activity | 4.24E-04 |
| 23 | GO:0050291: sphingosine N-acyltransferase activity | 4.24E-04 |
| 24 | GO:0003994: aconitate hydratase activity | 4.24E-04 |
| 25 | GO:0031683: G-protein beta/gamma-subunit complex binding | 6.92E-04 |
| 26 | GO:0004751: ribose-5-phosphate isomerase activity | 6.92E-04 |
| 27 | GO:0004383: guanylate cyclase activity | 6.92E-04 |
| 28 | GO:0016805: dipeptidase activity | 6.92E-04 |
| 29 | GO:0001664: G-protein coupled receptor binding | 6.92E-04 |
| 30 | GO:0001653: peptide receptor activity | 9.86E-04 |
| 31 | GO:0005459: UDP-galactose transmembrane transporter activity | 1.66E-03 |
| 32 | GO:0017137: Rab GTPase binding | 1.66E-03 |
| 33 | GO:0004040: amidase activity | 1.66E-03 |
| 34 | GO:0004356: glutamate-ammonia ligase activity | 1.66E-03 |
| 35 | GO:0004709: MAP kinase kinase kinase activity | 2.05E-03 |
| 36 | GO:0047714: galactolipase activity | 2.05E-03 |
| 37 | GO:0036402: proteasome-activating ATPase activity | 2.05E-03 |
| 38 | GO:0016615: malate dehydrogenase activity | 2.05E-03 |
| 39 | GO:0048040: UDP-glucuronate decarboxylase activity | 2.05E-03 |
| 40 | GO:0102391: decanoate--CoA ligase activity | 2.46E-03 |
| 41 | GO:0030060: L-malate dehydrogenase activity | 2.46E-03 |
| 42 | GO:0003978: UDP-glucose 4-epimerase activity | 2.46E-03 |
| 43 | GO:0019900: kinase binding | 2.46E-03 |
| 44 | GO:0070403: NAD+ binding | 2.46E-03 |
| 45 | GO:0042162: telomeric DNA binding | 2.90E-03 |
| 46 | GO:0004620: phospholipase activity | 2.90E-03 |
| 47 | GO:0004467: long-chain fatty acid-CoA ligase activity | 2.90E-03 |
| 48 | GO:0008235: metalloexopeptidase activity | 2.90E-03 |
| 49 | GO:0052747: sinapyl alcohol dehydrogenase activity | 3.36E-03 |
| 50 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 3.36E-03 |
| 51 | GO:0005096: GTPase activator activity | 3.53E-03 |
| 52 | GO:0008970: phosphatidylcholine 1-acylhydrolase activity | 3.84E-03 |
| 53 | GO:0030145: manganese ion binding | 3.88E-03 |
| 54 | GO:0071949: FAD binding | 4.35E-03 |
| 55 | GO:0004003: ATP-dependent DNA helicase activity | 4.35E-03 |
| 56 | GO:0003678: DNA helicase activity | 4.35E-03 |
| 57 | GO:0051539: 4 iron, 4 sulfur cluster binding | 4.84E-03 |
| 58 | GO:0045309: protein phosphorylated amino acid binding | 4.87E-03 |
| 59 | GO:0047617: acyl-CoA hydrolase activity | 4.87E-03 |
| 60 | GO:0016844: strictosidine synthase activity | 4.87E-03 |
| 61 | GO:0004568: chitinase activity | 5.42E-03 |
| 62 | GO:0019904: protein domain specific binding | 5.99E-03 |
| 63 | GO:0004177: aminopeptidase activity | 5.99E-03 |
| 64 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 6.58E-03 |
| 65 | GO:0004022: alcohol dehydrogenase (NAD) activity | 7.19E-03 |
| 66 | GO:0008139: nuclear localization sequence binding | 7.19E-03 |
| 67 | GO:0019888: protein phosphatase regulator activity | 7.19E-03 |
| 68 | GO:0061630: ubiquitin protein ligase activity | 7.71E-03 |
| 69 | GO:0031625: ubiquitin protein ligase binding | 8.18E-03 |
| 70 | GO:0017025: TBP-class protein binding | 8.47E-03 |
| 71 | GO:0004725: protein tyrosine phosphatase activity | 9.14E-03 |
| 72 | GO:0051536: iron-sulfur cluster binding | 9.83E-03 |
| 73 | GO:0003954: NADH dehydrogenase activity | 9.83E-03 |
| 74 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 1.13E-02 |
| 75 | GO:0009055: electron carrier activity | 1.30E-02 |
| 76 | GO:0047134: protein-disulfide reductase activity | 1.43E-02 |
| 77 | GO:0008565: protein transporter activity | 1.58E-02 |
| 78 | GO:0001085: RNA polymerase II transcription factor binding | 1.60E-02 |
| 79 | GO:0030276: clathrin binding | 1.60E-02 |
| 80 | GO:0008536: Ran GTPase binding | 1.60E-02 |
| 81 | GO:0050662: coenzyme binding | 1.68E-02 |
| 82 | GO:0004791: thioredoxin-disulfide reductase activity | 1.68E-02 |
| 83 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 1.85E-02 |
| 84 | GO:0016887: ATPase activity | 2.07E-02 |
| 85 | GO:0003684: damaged DNA binding | 2.13E-02 |
| 86 | GO:0016791: phosphatase activity | 2.13E-02 |
| 87 | GO:0016413: O-acetyltransferase activity | 2.31E-02 |
| 88 | GO:0005515: protein binding | 2.49E-02 |
| 89 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 2.61E-02 |
| 90 | GO:0016491: oxidoreductase activity | 2.67E-02 |
| 91 | GO:0004806: triglyceride lipase activity | 2.71E-02 |
| 92 | GO:0030247: polysaccharide binding | 2.71E-02 |
| 93 | GO:0004721: phosphoprotein phosphatase activity | 2.71E-02 |
| 94 | GO:0004683: calmodulin-dependent protein kinase activity | 2.71E-02 |
| 95 | GO:0000287: magnesium ion binding | 2.77E-02 |
| 96 | GO:0004222: metalloendopeptidase activity | 3.12E-02 |
| 97 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 3.23E-02 |
| 98 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 3.23E-02 |
| 99 | GO:0005507: copper ion binding | 3.80E-02 |
| 100 | GO:0004364: glutathione transferase activity | 4.01E-02 |
| 101 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.36E-02 |
| 102 | GO:0005198: structural molecule activity | 4.48E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005829: cytosol | 5.91E-10 |
| 2 | GO:0005886: plasma membrane | 1.31E-08 |
| 3 | GO:0043564: Ku70:Ku80 complex | 1.88E-04 |
| 4 | GO:0005911: cell-cell junction | 1.88E-04 |
| 5 | GO:0000138: Golgi trans cisterna | 1.88E-04 |
| 6 | GO:0005794: Golgi apparatus | 2.40E-04 |
| 7 | GO:0031314: extrinsic component of mitochondrial inner membrane | 4.24E-04 |
| 8 | GO:0030658: transport vesicle membrane | 9.86E-04 |
| 9 | GO:0031461: cullin-RING ubiquitin ligase complex | 9.86E-04 |
| 10 | GO:0005968: Rab-protein geranylgeranyltransferase complex | 9.86E-04 |
| 11 | GO:0005783: endoplasmic reticulum | 1.38E-03 |
| 12 | GO:0031597: cytosolic proteasome complex | 2.46E-03 |
| 13 | GO:0030173: integral component of Golgi membrane | 2.46E-03 |
| 14 | GO:0000794: condensed nuclear chromosome | 2.90E-03 |
| 15 | GO:0031595: nuclear proteasome complex | 2.90E-03 |
| 16 | GO:0034399: nuclear periphery | 3.36E-03 |
| 17 | GO:0030131: clathrin adaptor complex | 3.36E-03 |
| 18 | GO:0000784: nuclear chromosome, telomeric region | 3.84E-03 |
| 19 | GO:0008180: COP9 signalosome | 4.35E-03 |
| 20 | GO:0008540: proteasome regulatory particle, base subcomplex | 4.87E-03 |
| 21 | GO:0030125: clathrin vesicle coat | 5.42E-03 |
| 22 | GO:0031966: mitochondrial membrane | 6.88E-03 |
| 23 | GO:0009506: plasmodesma | 7.90E-03 |
| 24 | GO:0005635: nuclear envelope | 7.91E-03 |
| 25 | GO:0030176: integral component of endoplasmic reticulum membrane | 8.47E-03 |
| 26 | GO:0005769: early endosome | 9.14E-03 |
| 27 | GO:0045271: respiratory chain complex I | 1.05E-02 |
| 28 | GO:0005905: clathrin-coated pit | 1.13E-02 |
| 29 | GO:0005737: cytoplasm | 1.15E-02 |
| 30 | GO:0016021: integral component of membrane | 1.22E-02 |
| 31 | GO:0000790: nuclear chromatin | 1.43E-02 |
| 32 | GO:0031965: nuclear membrane | 1.77E-02 |
| 33 | GO:0005667: transcription factor complex | 2.61E-02 |
| 34 | GO:0000151: ubiquitin ligase complex | 2.91E-02 |
| 35 | GO:0005643: nuclear pore | 2.91E-02 |
| 36 | GO:0005789: endoplasmic reticulum membrane | 3.32E-02 |
| 37 | GO:0005819: spindle | 3.67E-02 |
| 38 | GO:0031902: late endosome membrane | 3.89E-02 |
| 39 | GO:0005802: trans-Golgi network | 4.39E-02 |
| 40 | GO:0005743: mitochondrial inner membrane | 4.79E-02 |