Gene: AT1G29390
     


Gene description


TAIR ID: AT1G29390

Short description: cold regulated 314 thylakoid membrane 2

Pathogen responsiveness: -0.73

General responsiveness: 0.77

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G102605  

Wheat: No orthologous gene

GO biological process


cellular response to cold, cold acclimation


GO cellular component


chloroplast thylakoid membrane, integral component of chloroplast inner membrane, chloroplast envelope, mitochondrion


GO molecular function


molecular_function


Protein domain


PfamPF05562, Cold acclimation protein WCOR413

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 12 (Top20%)

click to view PPI network

Differentially expressed condition


7 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.904.89E-04
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.131.18E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.741.78E-11
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.051.83E-04
GSE56094Col, WT, control 5 hCol, WT, hrpA- 5 h-1.516.50E-05
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-1.588.40E-06
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-1.522.43E-05






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