gene detail

Gene description

TAIR ID: AT1G26230

Short description: TCP-1/cpn60 chaperonin family protein

Pathogen responsiveness: 0.22

General responsiveness: 1.54

Orthologous

Rice:

OS04G0443900 OS06G0114000

Maize:

GRMZM2G042253

Wheat: No orthologous gene

GO biological process

protein folding, chaperone-mediated protein folding, 'de novo' protein folding, protein refolding

GO cellular component

chloroplast stroma, chloroplast envelope, cytosol, cytoplasm, chloroplast

GO molecular function

ATP binding, protein binding involved in protein folding, unfolded protein binding

Protein domain

Pfam	PF00118, TCP-1/cpn60 chaperonin family

Metabolic pathway

PWY-2724: alkane oxidation
PWY-2501: fatty acid α-oxidation I
PWY66-21: ethanol degradation II

KEGG pathway

PATH:ath03018: RNA degradation

Transcriptional regulation

No regulation information

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

27 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE11807	Col, ERF104 ox, water 4 h	Col, ERF104 ox, Flg22 4 h	-1.86	1.90E-02
GSE11807	Col, erf104 ko, water 4 h	Col, erf104 ko, Flg22 4 h	-1.69	3.03E-02
GSE12856	Col, WT, control	Col, WT, Bg h	-1.69	2.35E-07
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	-2.41	7.35E-09
GSE13739	Col, WT, control 7 d	Col, WT, G.orontii 7 d	-1.96	3.18E-13
GSE17464	Laer, control	Laer, Flg22 2 h	-1.56	1.55E-02
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-1.94	7.71E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.73	1.12E-04
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-2.13	2.97E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-3.02	2.30E-10
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a 6 h	-2.41	6.66E-08
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-2.33	3.25E-05
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-1.89	2.18E-04
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-2.04	1.32E-04
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-2.35	6.06E-14
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-1.64	4.05E-11
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.85	2.53E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-2.38	5.50E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.88	1.84E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-2.27	8.76E-14
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-2.18	1.61E-12
GSE50526	Col, WT, mock 9 h	Col, WT, A. brassicicola 9 h	-2.02	3.06E-02
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-2.34	1.14E-04
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-2.54	2.47E-06
GSE5520	Col, WT, control 7 h	Col, WT, hrpA- 10 h	-1.54	1.96E-02
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	-1.58	2.17E-06
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-2.10	2.52E-03