GO Enrichment Analysis of Co-expressed Genes with
AT1G26230
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010059: positive regulation of atrichoblast fate specification | 0.00E+00 |
| 2 | GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 3 | GO:0018160: peptidyl-pyrromethane cofactor linkage | 0.00E+00 |
| 4 | GO:0009657: plastid organization | 1.61E-06 |
| 5 | GO:0009658: chloroplast organization | 5.06E-06 |
| 6 | GO:0009451: RNA modification | 2.52E-05 |
| 7 | GO:0042793: transcription from plastid promoter | 3.71E-05 |
| 8 | GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process | 1.35E-04 |
| 9 | GO:0010063: positive regulation of trichoblast fate specification | 1.35E-04 |
| 10 | GO:0032958: inositol phosphate biosynthetic process | 1.35E-04 |
| 11 | GO:0006436: tryptophanyl-tRNA aminoacylation | 1.35E-04 |
| 12 | GO:0006434: seryl-tRNA aminoacylation | 1.35E-04 |
| 13 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 1.35E-04 |
| 14 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 1.35E-04 |
| 15 | GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic | 1.35E-04 |
| 16 | GO:1900865: chloroplast RNA modification | 1.69E-04 |
| 17 | GO:0048481: plant ovule development | 2.04E-04 |
| 18 | GO:0045037: protein import into chloroplast stroma | 2.70E-04 |
| 19 | GO:1900871: chloroplast mRNA modification | 3.11E-04 |
| 20 | GO:0018026: peptidyl-lysine monomethylation | 3.11E-04 |
| 21 | GO:0001682: tRNA 5'-leader removal | 3.11E-04 |
| 22 | GO:0043039: tRNA aminoacylation | 3.11E-04 |
| 23 | GO:0048255: mRNA stabilization | 3.11E-04 |
| 24 | GO:0042780: tRNA 3'-end processing | 5.13E-04 |
| 25 | GO:0005977: glycogen metabolic process | 5.13E-04 |
| 26 | GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic | 5.13E-04 |
| 27 | GO:0007005: mitochondrion organization | 6.38E-04 |
| 28 | GO:0016556: mRNA modification | 7.34E-04 |
| 29 | GO:0010306: rhamnogalacturonan II biosynthetic process | 7.34E-04 |
| 30 | GO:0010071: root meristem specification | 7.34E-04 |
| 31 | GO:0006020: inositol metabolic process | 7.34E-04 |
| 32 | GO:0051085: chaperone mediated protein folding requiring cofactor | 7.34E-04 |
| 33 | GO:0010239: chloroplast mRNA processing | 7.34E-04 |
| 34 | GO:0008033: tRNA processing | 8.75E-04 |
| 35 | GO:0048868: pollen tube development | 9.40E-04 |
| 36 | GO:0010021: amylopectin biosynthetic process | 9.73E-04 |
| 37 | GO:0006808: regulation of nitrogen utilization | 9.73E-04 |
| 38 | GO:0051781: positive regulation of cell division | 9.73E-04 |
| 39 | GO:0051322: anaphase | 9.73E-04 |
| 40 | GO:0006221: pyrimidine nucleotide biosynthetic process | 9.73E-04 |
| 41 | GO:0019252: starch biosynthetic process | 1.08E-03 |
| 42 | GO:0010583: response to cyclopentenone | 1.22E-03 |
| 43 | GO:0009616: virus induced gene silencing | 1.23E-03 |
| 44 | GO:0009790: embryo development | 1.43E-03 |
| 45 | GO:0050665: hydrogen peroxide biosynthetic process | 1.51E-03 |
| 46 | GO:0035194: posttranscriptional gene silencing by RNA | 1.51E-03 |
| 47 | GO:0010027: thylakoid membrane organization | 1.64E-03 |
| 48 | GO:0009082: branched-chain amino acid biosynthetic process | 1.81E-03 |
| 49 | GO:0009942: longitudinal axis specification | 1.81E-03 |
| 50 | GO:0009099: valine biosynthetic process | 1.81E-03 |
| 51 | GO:0009854: oxidative photosynthetic carbon pathway | 1.81E-03 |
| 52 | GO:0009861: jasmonic acid and ethylene-dependent systemic resistance | 1.81E-03 |
| 53 | GO:0042026: protein refolding | 1.81E-03 |
| 54 | GO:1901259: chloroplast rRNA processing | 1.81E-03 |
| 55 | GO:0048528: post-embryonic root development | 2.12E-03 |
| 56 | GO:0048437: floral organ development | 2.12E-03 |
| 57 | GO:0009097: isoleucine biosynthetic process | 2.81E-03 |
| 58 | GO:0010204: defense response signaling pathway, resistance gene-independent | 2.81E-03 |
| 59 | GO:0007389: pattern specification process | 2.81E-03 |
| 60 | GO:0071482: cellular response to light stimulus | 2.81E-03 |
| 61 | GO:0009793: embryo development ending in seed dormancy | 2.84E-03 |
| 62 | GO:0006783: heme biosynthetic process | 3.17E-03 |
| 63 | GO:0000902: cell morphogenesis | 3.17E-03 |
| 64 | GO:0006098: pentose-phosphate shunt | 3.17E-03 |
| 65 | GO:0006779: porphyrin-containing compound biosynthetic process | 3.55E-03 |
| 66 | GO:0009098: leucine biosynthetic process | 3.55E-03 |
| 67 | GO:0031425: chloroplast RNA processing | 3.55E-03 |
| 68 | GO:0006535: cysteine biosynthetic process from serine | 3.95E-03 |
| 69 | GO:0045036: protein targeting to chloroplast | 3.95E-03 |
| 70 | GO:0006259: DNA metabolic process | 3.95E-03 |
| 71 | GO:0006782: protoporphyrinogen IX biosynthetic process | 3.95E-03 |
| 72 | GO:0006265: DNA topological change | 4.36E-03 |
| 73 | GO:0009073: aromatic amino acid family biosynthetic process | 4.36E-03 |
| 74 | GO:0005975: carbohydrate metabolic process | 4.60E-03 |
| 75 | GO:0005983: starch catabolic process | 4.79E-03 |
| 76 | GO:0009691: cytokinin biosynthetic process | 5.22E-03 |
| 77 | GO:0006094: gluconeogenesis | 5.22E-03 |
| 78 | GO:0080188: RNA-directed DNA methylation | 6.14E-03 |
| 79 | GO:0009553: embryo sac development | 6.43E-03 |
| 80 | GO:0019344: cysteine biosynthetic process | 7.11E-03 |
| 81 | GO:0019953: sexual reproduction | 7.62E-03 |
| 82 | GO:0006418: tRNA aminoacylation for protein translation | 7.62E-03 |
| 83 | GO:0015992: proton transport | 8.14E-03 |
| 84 | GO:0016226: iron-sulfur cluster assembly | 8.67E-03 |
| 85 | GO:0006730: one-carbon metabolic process | 8.67E-03 |
| 86 | GO:0010091: trichome branching | 9.77E-03 |
| 87 | GO:0042127: regulation of cell proliferation | 9.77E-03 |
| 88 | GO:0016117: carotenoid biosynthetic process | 1.03E-02 |
| 89 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.03E-02 |
| 90 | GO:0000226: microtubule cytoskeleton organization | 1.09E-02 |
| 91 | GO:0006662: glycerol ether metabolic process | 1.15E-02 |
| 92 | GO:0010305: leaf vascular tissue pattern formation | 1.15E-02 |
| 93 | GO:0007059: chromosome segregation | 1.21E-02 |
| 94 | GO:0009851: auxin biosynthetic process | 1.27E-02 |
| 95 | GO:0009555: pollen development | 1.36E-02 |
| 96 | GO:0009828: plant-type cell wall loosening | 1.53E-02 |
| 97 | GO:0010252: auxin homeostasis | 1.53E-02 |
| 98 | GO:0000910: cytokinesis | 1.66E-02 |
| 99 | GO:0001666: response to hypoxia | 1.73E-02 |
| 100 | GO:0010029: regulation of seed germination | 1.80E-02 |
| 101 | GO:0009627: systemic acquired resistance | 1.88E-02 |
| 102 | GO:0006457: protein folding | 1.89E-02 |
| 103 | GO:0015995: chlorophyll biosynthetic process | 1.95E-02 |
| 104 | GO:0008219: cell death | 2.09E-02 |
| 105 | GO:0009817: defense response to fungus, incompatible interaction | 2.09E-02 |
| 106 | GO:0010200: response to chitin | 2.28E-02 |
| 107 | GO:0044550: secondary metabolite biosynthetic process | 2.40E-02 |
| 108 | GO:0034599: cellular response to oxidative stress | 2.56E-02 |
| 109 | GO:0042542: response to hydrogen peroxide | 2.88E-02 |
| 110 | GO:0008283: cell proliferation | 2.97E-02 |
| 111 | GO:0009926: auxin polar transport | 2.97E-02 |
| 112 | GO:0009644: response to high light intensity | 3.14E-02 |
| 113 | GO:0009965: leaf morphogenesis | 3.23E-02 |
| 114 | GO:0006397: mRNA processing | 3.40E-02 |
| 115 | GO:0048364: root development | 3.40E-02 |
| 116 | GO:0009664: plant-type cell wall organization | 3.49E-02 |
| 117 | GO:0006364: rRNA processing | 3.67E-02 |
| 118 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.76E-02 |
| 119 | GO:0006096: glycolytic process | 4.13E-02 |
| 120 | GO:0048367: shoot system development | 4.23E-02 |
| 121 | GO:0048316: seed development | 4.23E-02 |
| 122 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 4.30E-02 |
| 123 | GO:0009734: auxin-activated signaling pathway | 4.57E-02 |
| 124 | GO:0006396: RNA processing | 4.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004418: hydroxymethylbilane synthase activity | 0.00E+00 |
| 2 | GO:0015267: channel activity | 0.00E+00 |
| 3 | GO:0010303: limit dextrinase activity | 0.00E+00 |
| 4 | GO:0004561: alpha-N-acetylglucosaminidase activity | 0.00E+00 |
| 5 | GO:0051060: pullulanase activity | 0.00E+00 |
| 6 | GO:0004519: endonuclease activity | 3.42E-05 |
| 7 | GO:0004556: alpha-amylase activity | 3.71E-05 |
| 8 | GO:0004830: tryptophan-tRNA ligase activity | 1.35E-04 |
| 9 | GO:0033857: diphosphoinositol-pentakisphosphate kinase activity | 1.35E-04 |
| 10 | GO:0000829: inositol heptakisphosphate kinase activity | 1.35E-04 |
| 11 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 1.35E-04 |
| 12 | GO:0004828: serine-tRNA ligase activity | 1.35E-04 |
| 13 | GO:0000828: inositol hexakisphosphate kinase activity | 1.35E-04 |
| 14 | GO:0052381: tRNA dimethylallyltransferase activity | 1.35E-04 |
| 15 | GO:0004160: dihydroxy-acid dehydratase activity | 1.35E-04 |
| 16 | GO:0019156: isoamylase activity | 3.11E-04 |
| 17 | GO:0003852: 2-isopropylmalate synthase activity | 3.11E-04 |
| 18 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 3.11E-04 |
| 19 | GO:0004047: aminomethyltransferase activity | 3.11E-04 |
| 20 | GO:0017150: tRNA dihydrouridine synthase activity | 5.13E-04 |
| 21 | GO:0042781: 3'-tRNA processing endoribonuclease activity | 5.13E-04 |
| 22 | GO:0009678: hydrogen-translocating pyrophosphatase activity | 7.34E-04 |
| 23 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 7.34E-04 |
| 24 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 7.34E-04 |
| 25 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 7.34E-04 |
| 26 | GO:0009041: uridylate kinase activity | 7.34E-04 |
| 27 | GO:0004930: G-protein coupled receptor activity | 9.73E-04 |
| 28 | GO:0008891: glycolate oxidase activity | 9.73E-04 |
| 29 | GO:0016279: protein-lysine N-methyltransferase activity | 9.73E-04 |
| 30 | GO:0016836: hydro-lyase activity | 9.73E-04 |
| 31 | GO:0004888: transmembrane signaling receptor activity | 1.23E-03 |
| 32 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 1.23E-03 |
| 33 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.23E-03 |
| 34 | GO:0003723: RNA binding | 1.46E-03 |
| 35 | GO:0004332: fructose-bisphosphate aldolase activity | 1.51E-03 |
| 36 | GO:0004526: ribonuclease P activity | 1.51E-03 |
| 37 | GO:0004124: cysteine synthase activity | 1.81E-03 |
| 38 | GO:0004427: inorganic diphosphatase activity | 2.12E-03 |
| 39 | GO:0008173: RNA methyltransferase activity | 2.81E-03 |
| 40 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 2.81E-03 |
| 41 | GO:0003724: RNA helicase activity | 2.81E-03 |
| 42 | GO:0009672: auxin:proton symporter activity | 3.55E-03 |
| 43 | GO:0044183: protein binding involved in protein folding | 4.36E-03 |
| 44 | GO:0004565: beta-galactosidase activity | 5.22E-03 |
| 45 | GO:0010329: auxin efflux transmembrane transporter activity | 5.22E-03 |
| 46 | GO:0005524: ATP binding | 5.35E-03 |
| 47 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 5.68E-03 |
| 48 | GO:0003887: DNA-directed DNA polymerase activity | 6.62E-03 |
| 49 | GO:0004176: ATP-dependent peptidase activity | 8.14E-03 |
| 50 | GO:0008408: 3'-5' exonuclease activity | 8.14E-03 |
| 51 | GO:0019843: rRNA binding | 8.29E-03 |
| 52 | GO:0047134: protein-disulfide reductase activity | 1.03E-02 |
| 53 | GO:0004812: aminoacyl-tRNA ligase activity | 1.03E-02 |
| 54 | GO:0004527: exonuclease activity | 1.15E-02 |
| 55 | GO:0004791: thioredoxin-disulfide reductase activity | 1.21E-02 |
| 56 | GO:0010181: FMN binding | 1.21E-02 |
| 57 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.46E-02 |
| 58 | GO:0003684: damaged DNA binding | 1.53E-02 |
| 59 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 1.60E-02 |
| 60 | GO:0008237: metallopeptidase activity | 1.60E-02 |
| 61 | GO:0008168: methyltransferase activity | 1.71E-02 |
| 62 | GO:0000287: magnesium ion binding | 1.74E-02 |
| 63 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.94E-02 |
| 64 | GO:0004222: metalloendopeptidase activity | 2.24E-02 |
| 65 | GO:0003746: translation elongation factor activity | 2.48E-02 |
| 66 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 2.64E-02 |
| 67 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.72E-02 |
| 68 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 2.85E-02 |
| 69 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 2.94E-02 |
| 70 | GO:0004185: serine-type carboxypeptidase activity | 2.97E-02 |
| 71 | GO:0003924: GTPase activity | 3.26E-02 |
| 72 | GO:0003690: double-stranded DNA binding | 3.76E-02 |
| 73 | GO:0051082: unfolded protein binding | 4.71E-02 |
| 74 | GO:0015035: protein disulfide oxidoreductase activity | 4.81E-02 |
| 75 | GO:0008026: ATP-dependent helicase activity | 4.91E-02 |