co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G26230

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1905421: regulation of plant organ morphogenesis	0.00E+00
2	GO:0002184: cytoplasmic translational termination	0.00E+00
3	GO:0030155: regulation of cell adhesion	0.00E+00
4	GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate	0.00E+00
5	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
6	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
7	GO:0005996: monosaccharide metabolic process	0.00E+00
8	GO:0007172: signal complex assembly	0.00E+00
9	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
10	GO:0015979: photosynthesis	2.92E-09
11	GO:0010027: thylakoid membrane organization	1.30E-07
12	GO:0032544: plastid translation	1.79E-07
13	GO:0015995: chlorophyll biosynthetic process	2.22E-07
14	GO:0009773: photosynthetic electron transport in photosystem I	9.22E-07
15	GO:0018026: peptidyl-lysine monomethylation	4.70E-06
16	GO:0030388: fructose 1,6-bisphosphate metabolic process	4.70E-06
17	GO:0009735: response to cytokinin	1.10E-05
18	GO:0006000: fructose metabolic process	1.67E-05
19	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	3.71E-05
20	GO:0009409: response to cold	1.10E-04
21	GO:0006412: translation	1.15E-04
22	GO:0009658: chloroplast organization	1.35E-04
23	GO:0061077: chaperone-mediated protein folding	1.69E-04
24	GO:0000023: maltose metabolic process	3.22E-04
25	GO:0000025: maltose catabolic process	3.22E-04
26	GO:0005980: glycogen catabolic process	3.22E-04
27	GO:0000476: maturation of 4.5S rRNA	3.22E-04
28	GO:0000967: rRNA 5'-end processing	3.22E-04
29	GO:0010480: microsporocyte differentiation	3.22E-04
30	GO:0042371: vitamin K biosynthetic process	3.22E-04
31	GO:0080093: regulation of photorespiration	3.22E-04
32	GO:0043007: maintenance of rDNA	3.22E-04
33	GO:0031998: regulation of fatty acid beta-oxidation	3.22E-04
34	GO:0010028: xanthophyll cycle	3.22E-04
35	GO:0005978: glycogen biosynthetic process	3.36E-04
36	GO:0006002: fructose 6-phosphate metabolic process	4.12E-04
37	GO:0009657: plastid organization	4.12E-04
38	GO:0006782: protoporphyrinogen IX biosynthetic process	6.82E-04
39	GO:0034470: ncRNA processing	7.02E-04
40	GO:0019388: galactose catabolic process	7.02E-04
41	GO:0005976: polysaccharide metabolic process	7.02E-04
42	GO:0090342: regulation of cell aging	7.02E-04
43	GO:0031648: protein destabilization	7.02E-04
44	GO:0016122: xanthophyll metabolic process	7.02E-04
45	GO:0042254: ribosome biogenesis	7.47E-04
46	GO:0005983: starch catabolic process	8.99E-04
47	GO:0005986: sucrose biosynthetic process	1.02E-03
48	GO:0006094: gluconeogenesis	1.02E-03
49	GO:0048281: inflorescence morphogenesis	1.14E-03
50	GO:0006518: peptide metabolic process	1.14E-03
51	GO:0009266: response to temperature stimulus	1.14E-03
52	GO:0009934: regulation of meristem structural organization	1.14E-03
53	GO:0006810: transport	1.55E-03
54	GO:0010148: transpiration	1.63E-03
55	GO:0010731: protein glutathionylation	1.63E-03
56	GO:0009590: detection of gravity	1.63E-03
57	GO:0051322: anaphase	2.19E-03
58	GO:0019464: glycine decarboxylation via glycine cleavage system	2.19E-03
59	GO:0006109: regulation of carbohydrate metabolic process	2.19E-03
60	GO:0045727: positive regulation of translation	2.19E-03
61	GO:0015994: chlorophyll metabolic process	2.19E-03
62	GO:0006552: leucine catabolic process	2.19E-03
63	GO:0051205: protein insertion into membrane	2.19E-03
64	GO:0006546: glycine catabolic process	2.19E-03
65	GO:0010021: amylopectin biosynthetic process	2.19E-03
66	GO:0006808: regulation of nitrogen utilization	2.19E-03
67	GO:0000304: response to singlet oxygen	2.80E-03
68	GO:0010236: plastoquinone biosynthetic process	2.80E-03
69	GO:0045038: protein import into chloroplast thylakoid membrane	2.80E-03
70	GO:0006097: glyoxylate cycle	2.80E-03
71	GO:0006461: protein complex assembly	2.80E-03
72	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	3.46E-03
73	GO:0000470: maturation of LSU-rRNA	3.46E-03
74	GO:0042793: transcription from plastid promoter	3.46E-03
75	GO:0010190: cytochrome b6f complex assembly	3.46E-03
76	GO:0042549: photosystem II stabilization	3.46E-03
77	GO:0019252: starch biosynthetic process	3.60E-03
78	GO:0009955: adaxial/abaxial pattern specification	4.17E-03
79	GO:0042372: phylloquinone biosynthetic process	4.17E-03
80	GO:1901259: chloroplast rRNA processing	4.17E-03
81	GO:0030488: tRNA methylation	4.17E-03
82	GO:0009772: photosynthetic electron transport in photosystem II	4.92E-03
83	GO:0048437: floral organ development	4.92E-03
84	GO:0070370: cellular heat acclimation	4.92E-03
85	GO:0022904: respiratory electron transport chain	4.92E-03
86	GO:0010103: stomatal complex morphogenesis	4.92E-03
87	GO:0006353: DNA-templated transcription, termination	5.71E-03
88	GO:0001558: regulation of cell growth	6.55E-03
89	GO:0009790: embryo development	6.83E-03
90	GO:0016311: dephosphorylation	6.91E-03
91	GO:0051865: protein autoubiquitination	7.42E-03
92	GO:0006783: heme biosynthetic process	7.42E-03
93	GO:0006779: porphyrin-containing compound biosynthetic process	8.34E-03
94	GO:0042761: very long-chain fatty acid biosynthetic process	8.34E-03
95	GO:0005982: starch metabolic process	8.34E-03
96	GO:0009631: cold acclimation	8.41E-03
97	GO:0048829: root cap development	9.30E-03
98	GO:0031627: telomeric loop formation	9.30E-03
99	GO:0034599: cellular response to oxidative stress	9.65E-03
100	GO:0019684: photosynthesis, light reaction	1.03E-02
101	GO:0009089: lysine biosynthetic process via diaminopimelate	1.03E-02
102	GO:0006415: translational termination	1.03E-02
103	GO:0009073: aromatic amino acid family biosynthetic process	1.03E-02
104	GO:0043085: positive regulation of catalytic activity	1.03E-02
105	GO:0000272: polysaccharide catabolic process	1.03E-02
106	GO:0009750: response to fructose	1.03E-02
107	GO:0018119: peptidyl-cysteine S-nitrosylation	1.03E-02
108	GO:0048229: gametophyte development	1.03E-02
109	GO:0010015: root morphogenesis	1.03E-02
110	GO:0006631: fatty acid metabolic process	1.10E-02
111	GO:0045037: protein import into chloroplast stroma	1.13E-02
112	GO:0010102: lateral root morphogenesis	1.24E-02
113	GO:0010628: positive regulation of gene expression	1.24E-02
114	GO:0006108: malate metabolic process	1.24E-02
115	GO:0006006: glucose metabolic process	1.24E-02
116	GO:0010075: regulation of meristem growth	1.24E-02
117	GO:0006302: double-strand break repair	1.35E-02
118	GO:0019253: reductive pentose-phosphate cycle	1.35E-02
119	GO:0005985: sucrose metabolic process	1.46E-02
120	GO:0010025: wax biosynthetic process	1.58E-02
121	GO:0006636: unsaturated fatty acid biosynthetic process	1.58E-02
122	GO:0006364: rRNA processing	1.61E-02
123	GO:0009944: polarity specification of adaxial/abaxial axis	1.70E-02
124	GO:0051302: regulation of cell division	1.83E-02
125	GO:0006418: tRNA aminoacylation for protein translation	1.83E-02
126	GO:0007017: microtubule-based process	1.83E-02
127	GO:0009768: photosynthesis, light harvesting in photosystem I	1.83E-02
128	GO:0019915: lipid storage	1.95E-02
129	GO:0031408: oxylipin biosynthetic process	1.95E-02
130	GO:0051321: meiotic cell cycle	1.95E-02
131	GO:0030245: cellulose catabolic process	2.08E-02
132	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.08E-02
133	GO:0009686: gibberellin biosynthetic process	2.22E-02
134	GO:0001944: vasculature development	2.22E-02
135	GO:0006284: base-excision repair	2.35E-02
136	GO:0009561: megagametogenesis	2.35E-02
137	GO:0048653: anther development	2.63E-02
138	GO:0042631: cellular response to water deprivation	2.63E-02
139	GO:0055114: oxidation-reduction process	2.71E-02
140	GO:0006662: glycerol ether metabolic process	2.78E-02
141	GO:0009646: response to absence of light	2.92E-02
142	GO:0071554: cell wall organization or biogenesis	3.23E-02
143	GO:0000302: response to reactive oxygen species	3.23E-02
144	GO:0071281: cellular response to iron ion	3.54E-02
145	GO:1901657: glycosyl compound metabolic process	3.54E-02
146	GO:0005975: carbohydrate metabolic process	3.89E-02
147	GO:0000910: cytokinesis	4.03E-02
148	GO:0009607: response to biotic stimulus	4.36E-02
149	GO:0009627: systemic acquired resistance	4.53E-02

Rank	GO Term	Adjusted P value
1	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
2	GO:0046422: violaxanthin de-epoxidase activity	0.00E+00
3	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
4	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
5	GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity	0.00E+00
6	GO:0004174: electron-transferring-flavoprotein dehydrogenase activity	0.00E+00
7	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
8	GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity	0.00E+00
9	GO:0048039: ubiquinone binding	0.00E+00
10	GO:0009899: ent-kaurene synthase activity	0.00E+00
11	GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor	0.00E+00
12	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
13	GO:0019843: rRNA binding	6.85E-12
14	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	4.70E-06
15	GO:0010297: heteropolysaccharide binding	4.70E-06
16	GO:0003735: structural constituent of ribosome	4.91E-06
17	GO:0005528: FK506 binding	4.94E-06
18	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.64E-05
19	GO:0016851: magnesium chelatase activity	3.71E-05
20	GO:0016279: protein-lysine N-methyltransferase activity	6.61E-05
21	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	6.61E-05
22	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	3.22E-04
23	GO:0008184: glycogen phosphorylase activity	3.22E-04
24	GO:0004853: uroporphyrinogen decarboxylase activity	3.22E-04
25	GO:0004134: 4-alpha-glucanotransferase activity	3.22E-04
26	GO:0004645: phosphorylase activity	3.22E-04
27	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	3.22E-04
28	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	3.22E-04
29	GO:0048038: quinone binding	4.44E-04
30	GO:0018708: thiol S-methyltransferase activity	7.02E-04
31	GO:0003844: 1,4-alpha-glucan branching enzyme activity	7.02E-04
32	GO:0008967: phosphoglycolate phosphatase activity	7.02E-04
33	GO:0004614: phosphoglucomutase activity	7.02E-04
34	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	7.02E-04
35	GO:0042389: omega-3 fatty acid desaturase activity	7.02E-04
36	GO:0016868: intramolecular transferase activity, phosphotransferases	7.02E-04
37	GO:0043169: cation binding	1.14E-03
38	GO:0017150: tRNA dihydrouridine synthase activity	1.14E-03
39	GO:0002161: aminoacyl-tRNA editing activity	1.14E-03
40	GO:0005504: fatty acid binding	1.14E-03
41	GO:0045174: glutathione dehydrogenase (ascorbate) activity	1.14E-03
42	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	1.63E-03
43	GO:0004375: glycine dehydrogenase (decarboxylating) activity	1.63E-03
44	GO:0016149: translation release factor activity, codon specific	1.63E-03
45	GO:0043023: ribosomal large subunit binding	1.63E-03
46	GO:0033612: receptor serine/threonine kinase binding	1.91E-03
47	GO:0019199: transmembrane receptor protein kinase activity	2.19E-03
48	GO:0045430: chalcone isomerase activity	2.19E-03
49	GO:0042277: peptide binding	2.19E-03
50	GO:0004659: prenyltransferase activity	2.19E-03
51	GO:0008725: DNA-3-methyladenine glycosylase activity	2.80E-03
52	GO:0000287: magnesium ion binding	3.22E-03
53	GO:0004130: cytochrome-c peroxidase activity	3.46E-03
54	GO:0016615: malate dehydrogenase activity	3.46E-03
55	GO:2001070: starch binding	3.46E-03
56	GO:0030060: L-malate dehydrogenase activity	4.17E-03
57	GO:0004033: aldo-keto reductase (NADP) activity	5.71E-03
58	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	6.55E-03
59	GO:0008173: RNA methyltransferase activity	6.55E-03
60	GO:0003723: RNA binding	7.11E-03
61	GO:0003747: translation release factor activity	7.42E-03
62	GO:0009055: electron carrier activity	9.26E-03
63	GO:0008047: enzyme activator activity	9.30E-03
64	GO:0003691: double-stranded telomeric DNA binding	1.03E-02
65	GO:0044183: protein binding involved in protein folding	1.03E-02
66	GO:0047372: acylglycerol lipase activity	1.03E-02
67	GO:0016491: oxidoreductase activity	1.09E-02
68	GO:0000049: tRNA binding	1.13E-02
69	GO:0004565: beta-galactosidase activity	1.24E-02
70	GO:0004022: alcohol dehydrogenase (NAD) activity	1.24E-02
71	GO:0031072: heat shock protein binding	1.24E-02
72	GO:0043621: protein self-association	1.29E-02
73	GO:0051537: 2 iron, 2 sulfur cluster binding	1.29E-02
74	GO:0031409: pigment binding	1.58E-02
75	GO:0004857: enzyme inhibitor activity	1.70E-02
76	GO:0008408: 3'-5' exonuclease activity	1.95E-02
77	GO:0030570: pectate lyase activity	2.22E-02
78	GO:0008810: cellulase activity	2.22E-02
79	GO:0051082: unfolded protein binding	2.30E-02
80	GO:0047134: protein-disulfide reductase activity	2.49E-02
81	GO:0004812: aminoacyl-tRNA ligase activity	2.49E-02
82	GO:0016787: hydrolase activity	2.74E-02
83	GO:0050662: coenzyme binding	2.92E-02
84	GO:0004791: thioredoxin-disulfide reductase activity	2.92E-02
85	GO:0030170: pyridoxal phosphate binding	3.19E-02
86	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.54E-02
87	GO:0008483: transaminase activity	3.86E-02
88	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.86E-02
89	GO:0005200: structural constituent of cytoskeleton	3.86E-02
90	GO:0016413: O-acetyltransferase activity	4.03E-02
91	GO:0016168: chlorophyll binding	4.36E-02
92	GO:0102483: scopolin beta-glucosidase activity	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0005943: phosphatidylinositol 3-kinase complex, class IA	0.00E+00
2	GO:0042579: microbody	0.00E+00
3	GO:0017133: mitochondrial electron transfer flavoprotein complex	0.00E+00
4	GO:0009507: chloroplast	3.89E-58
5	GO:0009570: chloroplast stroma	3.51E-32
6	GO:0009535: chloroplast thylakoid membrane	1.03E-23
7	GO:0009941: chloroplast envelope	2.60E-21
8	GO:0009534: chloroplast thylakoid	6.35E-21
9	GO:0009543: chloroplast thylakoid lumen	7.55E-15
10	GO:0009579: thylakoid	1.87E-13
11	GO:0031977: thylakoid lumen	4.59E-11
12	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.71E-09
13	GO:0005840: ribosome	1.72E-08
14	GO:0030095: chloroplast photosystem II	4.00E-08
15	GO:0000427: plastid-encoded plastid RNA polymerase complex	4.70E-06
16	GO:0010287: plastoglobule	1.66E-05
17	GO:0010007: magnesium chelatase complex	1.67E-05
18	GO:0010319: stromule	5.60E-05
19	GO:0009654: photosystem II oxygen evolving complex	1.47E-04
20	GO:0009536: plastid	3.08E-04
21	GO:0000791: euchromatin	3.22E-04
22	GO:0019898: extrinsic component of membrane	4.06E-04
23	GO:0009295: nucleoid	6.14E-04
24	GO:0030870: Mre11 complex	7.02E-04
25	GO:0009508: plastid chromosome	1.02E-03
26	GO:0031969: chloroplast membrane	1.05E-03
27	GO:0005960: glycine cleavage complex	1.63E-03
28	GO:0015935: small ribosomal subunit	1.91E-03
29	GO:0000795: synaptonemal complex	2.80E-03
30	GO:0016272: prefoldin complex	4.17E-03
31	GO:0009706: chloroplast inner membrane	4.21E-03
32	GO:0009533: chloroplast stromal thylakoid	4.92E-03
33	GO:0048046: apoplast	5.24E-03
34	GO:0009538: photosystem I reaction center	5.71E-03
35	GO:0031305: integral component of mitochondrial inner membrane	5.71E-03
36	GO:0009501: amyloplast	5.71E-03
37	GO:0000783: nuclear telomere cap complex	6.55E-03
38	GO:0045298: tubulin complex	7.42E-03
39	GO:0005763: mitochondrial small ribosomal subunit	7.42E-03
40	GO:0005740: mitochondrial envelope	9.30E-03
41	GO:0009574: preprophase band	1.24E-02
42	GO:0030076: light-harvesting complex	1.46E-02
43	GO:0043234: protein complex	1.58E-02
44	GO:0042651: thylakoid membrane	1.83E-02
45	GO:0005874: microtubule	1.86E-02
46	GO:0009522: photosystem I	2.92E-02
47	GO:0009523: photosystem II	3.07E-02
48	GO:0000785: chromatin	3.38E-02