Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G26230

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
2GO:0061635: regulation of protein complex stability0.00E+00
3GO:0006428: isoleucyl-tRNA aminoacylation0.00E+00
4GO:0042821: pyridoxal biosynthetic process0.00E+00
5GO:0016553: base conversion or substitution editing0.00E+00
6GO:0090042: tubulin deacetylation0.00E+00
7GO:0060416: response to growth hormone0.00E+00
8GO:0000372: Group I intron splicing0.00E+00
9GO:0018023: peptidyl-lysine trimethylation0.00E+00
10GO:0042820: vitamin B6 catabolic process0.00E+00
11GO:0006429: leucyl-tRNA aminoacylation0.00E+00
12GO:0010275: NAD(P)H dehydrogenase complex assembly0.00E+00
13GO:0002184: cytoplasmic translational termination0.00E+00
14GO:0090706: specification of plant organ position0.00E+00
15GO:0009773: photosynthetic electron transport in photosystem I5.49E-08
16GO:0032544: plastid translation6.17E-07
17GO:0010207: photosystem II assembly7.56E-06
18GO:0034755: iron ion transmembrane transport9.54E-06
19GO:0006518: peptide metabolic process3.26E-05
20GO:0015979: photosynthesis3.90E-05
21GO:0010206: photosystem II repair4.50E-05
22GO:0006412: translation5.16E-05
23GO:0042254: ribosome biogenesis9.16E-05
24GO:0032543: mitochondrial translation1.89E-04
25GO:0015995: chlorophyll biosynthetic process2.46E-04
26GO:0042549: photosystem II stabilization2.68E-04
27GO:0000476: maturation of 4.5S rRNA4.64E-04
28GO:0009443: pyridoxal 5'-phosphate salvage4.64E-04
29GO:0000967: rRNA 5'-end processing4.64E-04
30GO:0006824: cobalt ion transport4.64E-04
31GO:0043489: RNA stabilization4.64E-04
32GO:1904966: positive regulation of vitamin E biosynthetic process4.64E-04
33GO:0043266: regulation of potassium ion transport4.64E-04
34GO:0000481: maturation of 5S rRNA4.64E-04
35GO:1904964: positive regulation of phytol biosynthetic process4.64E-04
36GO:0071461: cellular response to redox state4.64E-04
37GO:2000021: regulation of ion homeostasis4.64E-04
38GO:1902458: positive regulation of stomatal opening4.64E-04
39GO:0034337: RNA folding4.64E-04
40GO:0010450: inflorescence meristem growth4.64E-04
41GO:0010729: positive regulation of hydrogen peroxide biosynthetic process4.64E-04
42GO:0006810: transport7.75E-04
43GO:0000373: Group II intron splicing8.40E-04
44GO:0046741: transport of virus in host, tissue to tissue1.00E-03
45GO:1902326: positive regulation of chlorophyll biosynthetic process1.00E-03
46GO:0080005: photosystem stoichiometry adjustment1.00E-03
47GO:0018026: peptidyl-lysine monomethylation1.00E-03
48GO:0080148: negative regulation of response to water deprivation1.00E-03
49GO:1903426: regulation of reactive oxygen species biosynthetic process1.00E-03
50GO:0010270: photosystem II oxygen evolving complex assembly1.00E-03
51GO:0034470: ncRNA processing1.00E-03
52GO:0019684: photosynthesis, light reaction1.33E-03
53GO:0006415: translational termination1.33E-03
54GO:0018119: peptidyl-cysteine S-nitrosylation1.33E-03
55GO:0010027: thylakoid membrane organization1.40E-03
56GO:0006954: inflammatory response1.63E-03
57GO:0045165: cell fate commitment1.63E-03
58GO:0009767: photosynthetic electron transport chain1.73E-03
59GO:0018298: protein-chromophore linkage1.97E-03
60GO:0009052: pentose-phosphate shunt, non-oxidative branch2.37E-03
61GO:0009226: nucleotide-sugar biosynthetic process2.37E-03
62GO:0006424: glutamyl-tRNA aminoacylation2.37E-03
63GO:0016556: mRNA modification2.37E-03
64GO:0043572: plastid fission2.37E-03
65GO:2001141: regulation of RNA biosynthetic process2.37E-03
66GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly2.37E-03
67GO:0009152: purine ribonucleotide biosynthetic process2.37E-03
68GO:0046653: tetrahydrofolate metabolic process2.37E-03
69GO:0006636: unsaturated fatty acid biosynthetic process2.44E-03
70GO:0006418: tRNA aminoacylation for protein translation2.99E-03
71GO:0015994: chlorophyll metabolic process3.18E-03
72GO:2000122: negative regulation of stomatal complex development3.18E-03
73GO:0031122: cytoplasmic microtubule organization3.18E-03
74GO:0006546: glycine catabolic process3.18E-03
75GO:0006749: glutathione metabolic process3.18E-03
76GO:0010037: response to carbon dioxide3.18E-03
77GO:0006808: regulation of nitrogen utilization3.18E-03
78GO:0015976: carbon utilization3.18E-03
79GO:0019464: glycine decarboxylation via glycine cleavage system3.18E-03
80GO:0055114: oxidation-reduction process3.44E-03
81GO:0009247: glycolipid biosynthetic process4.08E-03
82GO:0006564: L-serine biosynthetic process4.08E-03
83GO:0010236: plastoquinone biosynthetic process4.08E-03
84GO:0045038: protein import into chloroplast thylakoid membrane4.08E-03
85GO:1902183: regulation of shoot apical meristem development4.08E-03
86GO:0010158: abaxial cell fate specification4.08E-03
87GO:0009451: RNA modification4.09E-03
88GO:0009306: protein secretion4.27E-03
89GO:0000413: protein peptidyl-prolyl isomerization5.00E-03
90GO:0016554: cytidine to uridine editing5.05E-03
91GO:0006655: phosphatidylglycerol biosynthetic process5.05E-03
92GO:0006828: manganese ion transport5.05E-03
93GO:0032973: amino acid export5.05E-03
94GO:0010190: cytochrome b6f complex assembly5.05E-03
95GO:0018258: protein O-linked glycosylation via hydroxyproline5.05E-03
96GO:0010405: arabinogalactan protein metabolic process5.05E-03
97GO:0000470: maturation of LSU-rRNA5.05E-03
98GO:0032259: methylation5.10E-03
99GO:0006508: proteolysis5.88E-03
100GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)6.09E-03
101GO:0010189: vitamin E biosynthetic process6.09E-03
102GO:0009793: embryo development ending in seed dormancy6.84E-03
103GO:0006821: chloride transport7.20E-03
104GO:0009395: phospholipid catabolic process7.20E-03
105GO:0043090: amino acid import7.20E-03
106GO:0009658: chloroplast organization7.68E-03
107GO:0019375: galactolipid biosynthetic process8.39E-03
108GO:0009704: de-etiolation8.39E-03
109GO:0032508: DNA duplex unwinding8.39E-03
110GO:2000070: regulation of response to water deprivation8.39E-03
111GO:0048564: photosystem I assembly8.39E-03
112GO:0009657: plastid organization9.63E-03
113GO:0017004: cytochrome complex assembly9.63E-03
114GO:0010093: specification of floral organ identity9.63E-03
115GO:0071482: cellular response to light stimulus9.63E-03
116GO:0009821: alkaloid biosynthetic process1.09E-02
117GO:0080144: amino acid homeostasis1.09E-02
118GO:2000024: regulation of leaf development1.09E-02
119GO:0009051: pentose-phosphate shunt, oxidative branch1.09E-02
120GO:0042761: very long-chain fatty acid biosynthetic process1.23E-02
121GO:1900865: chloroplast RNA modification1.23E-02
122GO:0010205: photoinhibition1.23E-02
123GO:0009817: defense response to fungus, incompatible interaction1.27E-02
124GO:0009735: response to cytokinin1.28E-02
125GO:0019538: protein metabolic process1.37E-02
126GO:0009407: toxin catabolic process1.40E-02
127GO:0006816: calcium ion transport1.52E-02
128GO:0009089: lysine biosynthetic process via diaminopimelate1.52E-02
129GO:0009073: aromatic amino acid family biosynthetic process1.52E-02
130GO:0006879: cellular iron ion homeostasis1.52E-02
131GO:0006352: DNA-templated transcription, initiation1.52E-02
132GO:0009853: photorespiration1.61E-02
133GO:0016024: CDP-diacylglycerol biosynthetic process1.68E-02
134GO:0030048: actin filament-based movement1.84E-02
135GO:0010628: positive regulation of gene expression1.84E-02
136GO:0006006: glucose metabolic process1.84E-02
137GO:0018107: peptidyl-threonine phosphorylation1.84E-02
138GO:0009739: response to gibberellin1.97E-02
139GO:0010020: chloroplast fission2.00E-02
140GO:0009933: meristem structural organization2.00E-02
141GO:0019253: reductive pentose-phosphate cycle2.00E-02
142GO:0048768: root hair cell tip growth2.00E-02
143GO:0090351: seedling development2.17E-02
144GO:0008152: metabolic process2.22E-02
145GO:0009636: response to toxic substance2.34E-02
146GO:0010025: wax biosynthetic process2.35E-02
147GO:0006855: drug transmembrane transport2.43E-02
148GO:0009944: polarity specification of adaxial/abaxial axis2.53E-02
149GO:0016575: histone deacetylation2.71E-02
150GO:0006364: rRNA processing2.80E-02
151GO:0061077: chaperone-mediated protein folding2.90E-02
152GO:0016226: iron-sulfur cluster assembly3.09E-02
153GO:0006730: one-carbon metabolic process3.09E-02
154GO:0009409: response to cold3.28E-02
155GO:0016117: carotenoid biosynthetic process3.70E-02
156GO:0006396: RNA processing4.10E-02
157GO:0010154: fruit development4.12E-02
158GO:0006814: sodium ion transport4.34E-02
159GO:0071554: cell wall organization or biogenesis4.78E-02
160GO:0002229: defense response to oomycetes4.78E-02
161GO:0000302: response to reactive oxygen species4.78E-02
RankGO TermAdjusted P value
1GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
2GO:0051721: protein phosphatase 2A binding0.00E+00
3GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity0.00E+00
4GO:0042903: tubulin deacetylase activity0.00E+00
5GO:0004822: isoleucine-tRNA ligase activity0.00E+00
6GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity0.00E+00
7GO:0043014: alpha-tubulin binding0.00E+00
8GO:0004823: leucine-tRNA ligase activity0.00E+00
9GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
10GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
11GO:0047513: 1,2-alpha-L-fucosidase activity0.00E+00
12GO:0019843: rRNA binding6.18E-12
13GO:0003755: peptidyl-prolyl cis-trans isomerase activity3.87E-08
14GO:0005528: FK506 binding4.68E-07
15GO:0016851: magnesium chelatase activity4.78E-07
16GO:0003735: structural constituent of ribosome1.76E-05
17GO:0004033: aldo-keto reductase (NADP) activity2.33E-05
18GO:0002161: aminoacyl-tRNA editing activity3.26E-05
19GO:0004222: metalloendopeptidase activity3.56E-05
20GO:0016149: translation release factor activity, codon specific7.03E-05
21GO:0008237: metallopeptidase activity1.51E-04
22GO:0008236: serine-type peptidase activity2.68E-04
23GO:0004176: ATP-dependent peptidase activity3.55E-04
24GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity3.59E-04
25GO:0051920: peroxiredoxin activity3.59E-04
26GO:0008568: microtubule-severing ATPase activity4.64E-04
27GO:0045485: omega-6 fatty acid desaturase activity4.64E-04
28GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity4.64E-04
29GO:0004328: formamidase activity4.64E-04
30GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity4.64E-04
31GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity4.64E-04
32GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity4.64E-04
33GO:0016209: antioxidant activity5.75E-04
34GO:0003747: translation release factor activity8.40E-04
35GO:0005381: iron ion transmembrane transporter activity9.90E-04
36GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase1.00E-03
37GO:0047746: chlorophyllase activity1.00E-03
38GO:0042389: omega-3 fatty acid desaturase activity1.00E-03
39GO:0004618: phosphoglycerate kinase activity1.00E-03
40GO:0004326: tetrahydrofolylpolyglutamate synthase activity1.00E-03
41GO:0009977: proton motive force dependent protein transmembrane transporter activity1.00E-03
42GO:0004617: phosphoglycerate dehydrogenase activity1.00E-03
43GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity1.00E-03
44GO:0017150: tRNA dihydrouridine synthase activity1.63E-03
45GO:0003913: DNA photolyase activity1.63E-03
46GO:0004751: ribose-5-phosphate isomerase activity1.63E-03
47GO:0030267: glyoxylate reductase (NADP) activity1.63E-03
48GO:0016742: hydroxymethyl-, formyl- and related transferase activity1.63E-03
49GO:0070402: NADPH binding1.63E-03
50GO:0008864: formyltetrahydrofolate deformylase activity1.63E-03
51GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity1.63E-03
52GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity1.63E-03
53GO:0008266: poly(U) RNA binding1.95E-03
54GO:0016788: hydrolase activity, acting on ester bonds1.96E-03
55GO:0035250: UDP-galactosyltransferase activity2.37E-03
56GO:0048487: beta-tubulin binding2.37E-03
57GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides2.37E-03
58GO:0043023: ribosomal large subunit binding2.37E-03
59GO:0008097: 5S rRNA binding2.37E-03
60GO:0008508: bile acid:sodium symporter activity2.37E-03
61GO:0004375: glycine dehydrogenase (decarboxylating) activity2.37E-03
62GO:0016987: sigma factor activity3.18E-03
63GO:0043495: protein anchor3.18E-03
64GO:0016279: protein-lysine N-methyltransferase activity3.18E-03
65GO:0001053: plastid sigma factor activity3.18E-03
66GO:0004345: glucose-6-phosphate dehydrogenase activity3.18E-03
67GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor3.18E-03
68GO:0004045: aminoacyl-tRNA hydrolase activity3.18E-03
69GO:0016887: ATPase activity3.62E-03
70GO:0022891: substrate-specific transmembrane transporter activity3.92E-03
71GO:0004812: aminoacyl-tRNA ligase activity4.62E-03
72GO:0004130: cytochrome-c peroxidase activity5.05E-03
73GO:0004366: glycerol-3-phosphate O-acyltransferase activity5.05E-03
74GO:0042578: phosphoric ester hydrolase activity5.05E-03
75GO:0008200: ion channel inhibitor activity5.05E-03
76GO:0005247: voltage-gated chloride channel activity5.05E-03
77GO:1990714: hydroxyproline O-galactosyltransferase activity5.05E-03
78GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity6.09E-03
79GO:0004519: endonuclease activity6.38E-03
80GO:0009881: photoreceptor activity7.20E-03
81GO:0019899: enzyme binding7.20E-03
82GO:0008168: methyltransferase activity7.25E-03
83GO:0004601: peroxidase activity7.68E-03
84GO:0003723: RNA binding8.07E-03
85GO:0043022: ribosome binding8.39E-03
86GO:0016597: amino acid binding9.13E-03
87GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)9.63E-03
88GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water9.63E-03
89GO:0016168: chlorophyll binding1.02E-02
90GO:0005384: manganese ion transmembrane transporter activity1.23E-02
91GO:0047617: acyl-CoA hydrolase activity1.23E-02
92GO:0016844: strictosidine synthase activity1.23E-02
93GO:0004252: serine-type endopeptidase activity1.29E-02
94GO:0015238: drug transmembrane transporter activity1.33E-02
95GO:0016787: hydrolase activity1.40E-02
96GO:0000049: tRNA binding1.68E-02
97GO:0008378: galactosyltransferase activity1.68E-02
98GO:0004022: alcohol dehydrogenase (NAD) activity1.84E-02
99GO:0004089: carbonate dehydratase activity1.84E-02
100GO:0015095: magnesium ion transmembrane transporter activity1.84E-02
101GO:0004364: glutathione transferase activity2.00E-02
102GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.00E-02
103GO:0003774: motor activity2.00E-02
104GO:0043621: protein self-association2.25E-02
105GO:0051537: 2 iron, 2 sulfur cluster binding2.25E-02
106GO:0030246: carbohydrate binding2.48E-02
107GO:0051536: iron-sulfur cluster binding2.53E-02
108GO:0004407: histone deacetylase activity2.53E-02
109GO:0043424: protein histidine kinase binding2.71E-02
110GO:0016491: oxidoreductase activity3.11E-02
111GO:0003713: transcription coactivator activity4.12E-02
112GO:0008080: N-acetyltransferase activity4.12E-02
113GO:0048038: quinone binding4.78E-02
114GO:0016758: transferase activity, transferring hexosyl groups4.84E-02
RankGO TermAdjusted P value
1GO:0005943: phosphatidylinositol 3-kinase complex, class IA0.00E+00
2GO:0009344: nitrite reductase complex [NAD(P)H]0.00E+00
3GO:0009571: proplastid stroma0.00E+00
4GO:0009507: chloroplast2.07E-83
5GO:0009535: chloroplast thylakoid membrane8.79E-38
6GO:0009570: chloroplast stroma1.90E-34
7GO:0009941: chloroplast envelope5.61E-31
8GO:0009534: chloroplast thylakoid3.46E-27
9GO:0009543: chloroplast thylakoid lumen1.22E-25
10GO:0009579: thylakoid1.51E-19
11GO:0031977: thylakoid lumen5.60E-13
12GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)1.10E-10
13GO:0010007: magnesium chelatase complex9.97E-08
14GO:0005840: ribosome3.19E-06
15GO:0009706: chloroplast inner membrane4.23E-06
16GO:0009533: chloroplast stromal thylakoid1.57E-05
17GO:0030095: chloroplast photosystem II1.71E-04
18GO:0009654: photosystem II oxygen evolving complex3.12E-04
19GO:0010287: plastoglobule4.49E-04
20GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex4.64E-04
21GO:0009547: plastid ribosome4.64E-04
22GO:0031969: chloroplast membrane7.00E-04
23GO:0009523: photosystem II8.13E-04
24GO:0019898: extrinsic component of membrane8.13E-04
25GO:0042170: plastid membrane1.00E-03
26GO:0009536: plastid1.34E-03
27GO:0030529: intracellular ribonucleoprotein complex1.40E-03
28GO:0000311: plastid large ribosomal subunit1.52E-03
29GO:0033281: TAT protein transport complex1.63E-03
30GO:0000312: plastid small ribosomal subunit1.95E-03
31GO:0005960: glycine cleavage complex2.37E-03
32GO:0034707: chloride channel complex5.05E-03
33GO:0016459: myosin complex1.37E-02
34GO:0015934: large ribosomal subunit1.47E-02
35GO:0032040: small-subunit processome1.68E-02
36GO:0009508: plastid chromosome1.84E-02
37GO:0043231: intracellular membrane-bounded organelle2.22E-02
38GO:0042651: thylakoid membrane2.71E-02
39GO:0009532: plastid stroma2.90E-02
40GO:0016020: membrane3.49E-02
41GO:0022625: cytosolic large ribosomal subunit4.11E-02
42GO:0009522: photosystem I4.34E-02
<
Gene type



Gene DE type