Gene: AT1G22740
     

Gene description


TAIR ID: AT1G22740

Short description: RAB GTPase homolog G3B

Pathogen responsiveness: 0.61

General responsiveness: -0.55

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G090034  

Wheat: No orthologous gene

GO biological process


positive regulation of autophagy, xylem development, programmed cell death involved in cell development, protein transport, tracheary element differentiation


GO cellular component


vacuole, plasma membrane


GO molecular function


GTPase activity


Protein domain


PfamPF00071, Ras family
SMARTSM00175, RAB
SMARTSM00173, RAS
SMARTSM00176, RAN
SMARTSM00174, RHO

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT5G61850, AT2G43010

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


25 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h-1.701.74E-05
GSE17464Laer, controlLaer, Flg22 2 h-1.695.20E-03
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-1.611.61E-09
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h2.451.48E-12
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h3.243.93E-15
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h2.451.23E-12
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h3.751.73E-16
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.722.21E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.669.60E-13
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.556.73E-09
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.221.74E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-3.866.87E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-3.364.98E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-4.518.93E-16
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.511.29E-12
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.733.06E-13
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.478.34E-16
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.831.22E-05
GSE5520Col, WT, control 10 hCol, WT, Cor- hrpS- 10 h-1.911.06E-02
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h-2.167.55E-04
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.733.97E-04
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-3.021.09E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-2.302.92E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h-2.144.44E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min-1.574.91E-02






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