GO Enrichment Analysis of Co-expressed Genes with
AT1G22740
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046396: D-galacturonate metabolic process | 0.00E+00 |
| 2 | GO:0006429: leucyl-tRNA aminoacylation | 0.00E+00 |
| 3 | GO:1905421: regulation of plant organ morphogenesis | 0.00E+00 |
| 4 | GO:0043488: regulation of mRNA stability | 0.00E+00 |
| 5 | GO:0030155: regulation of cell adhesion | 0.00E+00 |
| 6 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 7 | GO:0018131: oxazole or thiazole biosynthetic process | 0.00E+00 |
| 8 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 9 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 10 | GO:0031116: positive regulation of microtubule polymerization | 0.00E+00 |
| 11 | GO:0009658: chloroplast organization | 5.98E-06 |
| 12 | GO:0009657: plastid organization | 7.67E-06 |
| 13 | GO:0006415: translational termination | 2.44E-05 |
| 14 | GO:0048528: post-embryonic root development | 1.88E-04 |
| 15 | GO:0006353: DNA-templated transcription, termination | 2.38E-04 |
| 16 | GO:0042547: cell wall modification involved in multidimensional cell growth | 2.55E-04 |
| 17 | GO:0042371: vitamin K biosynthetic process | 2.55E-04 |
| 18 | GO:0006436: tryptophanyl-tRNA aminoacylation | 2.55E-04 |
| 19 | GO:0034080: CENP-A containing nucleosome assembly | 2.55E-04 |
| 20 | GO:0006747: FAD biosynthetic process | 2.55E-04 |
| 21 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 2.55E-04 |
| 22 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 2.55E-04 |
| 23 | GO:0000476: maturation of 4.5S rRNA | 2.55E-04 |
| 24 | GO:0000967: rRNA 5'-end processing | 2.55E-04 |
| 25 | GO:0051418: microtubule nucleation by microtubule organizing center | 2.55E-04 |
| 26 | GO:0070509: calcium ion import | 2.55E-04 |
| 27 | GO:1900033: negative regulation of trichome patterning | 5.64E-04 |
| 28 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 5.64E-04 |
| 29 | GO:0048826: cotyledon morphogenesis | 5.64E-04 |
| 30 | GO:0010024: phytochromobilin biosynthetic process | 5.64E-04 |
| 31 | GO:0034470: ncRNA processing | 5.64E-04 |
| 32 | GO:0033566: gamma-tubulin complex localization | 5.64E-04 |
| 33 | GO:0009790: embryo development | 7.95E-04 |
| 34 | GO:0001578: microtubule bundle formation | 9.15E-04 |
| 35 | GO:0007052: mitotic spindle organization | 9.15E-04 |
| 36 | GO:0045910: negative regulation of DNA recombination | 9.15E-04 |
| 37 | GO:0010338: leaf formation | 9.15E-04 |
| 38 | GO:0048281: inflorescence morphogenesis | 9.15E-04 |
| 39 | GO:0006954: inflammatory response | 9.15E-04 |
| 40 | GO:0006788: heme oxidation | 9.15E-04 |
| 41 | GO:0070588: calcium ion transmembrane transport | 9.26E-04 |
| 42 | GO:0009926: auxin polar transport | 1.20E-03 |
| 43 | GO:0006418: tRNA aminoacylation for protein translation | 1.25E-03 |
| 44 | GO:0043572: plastid fission | 1.31E-03 |
| 45 | GO:0034508: centromere complex assembly | 1.31E-03 |
| 46 | GO:0007231: osmosensory signaling pathway | 1.31E-03 |
| 47 | GO:0010239: chloroplast mRNA processing | 1.31E-03 |
| 48 | GO:0019048: modulation by virus of host morphology or physiology | 1.31E-03 |
| 49 | GO:0090307: mitotic spindle assembly | 1.31E-03 |
| 50 | GO:0010306: rhamnogalacturonan II biosynthetic process | 1.31E-03 |
| 51 | GO:0031048: chromatin silencing by small RNA | 1.31E-03 |
| 52 | GO:0010148: transpiration | 1.31E-03 |
| 53 | GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center | 1.31E-03 |
| 54 | GO:0006730: one-carbon metabolic process | 1.50E-03 |
| 55 | GO:0048629: trichome patterning | 1.75E-03 |
| 56 | GO:0051322: anaphase | 1.75E-03 |
| 57 | GO:0033500: carbohydrate homeostasis | 1.75E-03 |
| 58 | GO:0051567: histone H3-K9 methylation | 1.75E-03 |
| 59 | GO:0007020: microtubule nucleation | 1.75E-03 |
| 60 | GO:0044205: 'de novo' UMP biosynthetic process | 1.75E-03 |
| 61 | GO:0010236: plastoquinone biosynthetic process | 2.23E-03 |
| 62 | GO:0046785: microtubule polymerization | 2.23E-03 |
| 63 | GO:0032543: mitochondrial translation | 2.23E-03 |
| 64 | GO:0048868: pollen tube development | 2.24E-03 |
| 65 | GO:0016458: gene silencing | 2.75E-03 |
| 66 | GO:0050665: hydrogen peroxide biosynthetic process | 2.75E-03 |
| 67 | GO:0010405: arabinogalactan protein metabolic process | 2.75E-03 |
| 68 | GO:0010358: leaf shaping | 2.75E-03 |
| 69 | GO:0006655: phosphatidylglycerol biosynthetic process | 2.75E-03 |
| 70 | GO:0032973: amino acid export | 2.75E-03 |
| 71 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 2.75E-03 |
| 72 | GO:0009228: thiamine biosynthetic process | 2.75E-03 |
| 73 | GO:0010583: response to cyclopentenone | 2.94E-03 |
| 74 | GO:0009854: oxidative photosynthetic carbon pathway | 3.30E-03 |
| 75 | GO:0080086: stamen filament development | 3.30E-03 |
| 76 | GO:0046835: carbohydrate phosphorylation | 3.30E-03 |
| 77 | GO:0042372: phylloquinone biosynthetic process | 3.30E-03 |
| 78 | GO:0017148: negative regulation of translation | 3.30E-03 |
| 79 | GO:0009942: longitudinal axis specification | 3.30E-03 |
| 80 | GO:1901259: chloroplast rRNA processing | 3.30E-03 |
| 81 | GO:0010252: auxin homeostasis | 3.33E-03 |
| 82 | GO:0010103: stomatal complex morphogenesis | 3.89E-03 |
| 83 | GO:0009772: photosynthetic electron transport in photosystem II | 3.89E-03 |
| 84 | GO:0043090: amino acid import | 3.89E-03 |
| 85 | GO:0070370: cellular heat acclimation | 3.89E-03 |
| 86 | GO:0010444: guard mother cell differentiation | 3.89E-03 |
| 87 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 3.89E-03 |
| 88 | GO:0010027: thylakoid membrane organization | 3.97E-03 |
| 89 | GO:0000105: histidine biosynthetic process | 4.52E-03 |
| 90 | GO:0009231: riboflavin biosynthetic process | 4.52E-03 |
| 91 | GO:0042255: ribosome assembly | 4.52E-03 |
| 92 | GO:0046620: regulation of organ growth | 4.52E-03 |
| 93 | GO:0070413: trehalose metabolism in response to stress | 4.52E-03 |
| 94 | GO:0032544: plastid translation | 5.18E-03 |
| 95 | GO:0007389: pattern specification process | 5.18E-03 |
| 96 | GO:0009827: plant-type cell wall modification | 5.18E-03 |
| 97 | GO:0001558: regulation of cell growth | 5.18E-03 |
| 98 | GO:0010204: defense response signaling pathway, resistance gene-independent | 5.18E-03 |
| 99 | GO:0000373: Group II intron splicing | 5.86E-03 |
| 100 | GO:0000902: cell morphogenesis | 5.86E-03 |
| 101 | GO:0006098: pentose-phosphate shunt | 5.86E-03 |
| 102 | GO:0080144: amino acid homeostasis | 5.86E-03 |
| 103 | GO:0009638: phototropism | 6.58E-03 |
| 104 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 6.58E-03 |
| 105 | GO:0030422: production of siRNA involved in RNA interference | 7.33E-03 |
| 106 | GO:0006298: mismatch repair | 7.33E-03 |
| 107 | GO:0006949: syncytium formation | 7.33E-03 |
| 108 | GO:0006259: DNA metabolic process | 7.33E-03 |
| 109 | GO:0005975: carbohydrate metabolic process | 7.38E-03 |
| 110 | GO:0009684: indoleacetic acid biosynthetic process | 8.11E-03 |
| 111 | GO:0006816: calcium ion transport | 8.11E-03 |
| 112 | GO:0009773: photosynthetic electron transport in photosystem I | 8.11E-03 |
| 113 | GO:0006265: DNA topological change | 8.11E-03 |
| 114 | GO:0009089: lysine biosynthetic process via diaminopimelate | 8.11E-03 |
| 115 | GO:0009734: auxin-activated signaling pathway | 8.36E-03 |
| 116 | GO:0016024: CDP-diacylglycerol biosynthetic process | 8.92E-03 |
| 117 | GO:0045037: protein import into chloroplast stroma | 8.92E-03 |
| 118 | GO:0009965: leaf morphogenesis | 9.53E-03 |
| 119 | GO:0010229: inflorescence development | 9.75E-03 |
| 120 | GO:0050826: response to freezing | 9.75E-03 |
| 121 | GO:0006094: gluconeogenesis | 9.75E-03 |
| 122 | GO:2000012: regulation of auxin polar transport | 9.75E-03 |
| 123 | GO:0009785: blue light signaling pathway | 9.75E-03 |
| 124 | GO:0010628: positive regulation of gene expression | 9.75E-03 |
| 125 | GO:0009664: plant-type cell wall organization | 1.06E-02 |
| 126 | GO:0010020: chloroplast fission | 1.06E-02 |
| 127 | GO:0071555: cell wall organization | 1.08E-02 |
| 128 | GO:0071732: cellular response to nitric oxide | 1.15E-02 |
| 129 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.18E-02 |
| 130 | GO:0009833: plant-type primary cell wall biogenesis | 1.24E-02 |
| 131 | GO:0006833: water transport | 1.24E-02 |
| 132 | GO:0000162: tryptophan biosynthetic process | 1.24E-02 |
| 133 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.32E-02 |
| 134 | GO:0005992: trehalose biosynthetic process | 1.34E-02 |
| 135 | GO:0009116: nucleoside metabolic process | 1.34E-02 |
| 136 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.34E-02 |
| 137 | GO:0030150: protein import into mitochondrial matrix | 1.34E-02 |
| 138 | GO:0007010: cytoskeleton organization | 1.34E-02 |
| 139 | GO:0051302: regulation of cell division | 1.43E-02 |
| 140 | GO:0043622: cortical microtubule organization | 1.43E-02 |
| 141 | GO:0006306: DNA methylation | 1.53E-02 |
| 142 | GO:0031348: negative regulation of defense response | 1.64E-02 |
| 143 | GO:0009814: defense response, incompatible interaction | 1.64E-02 |
| 144 | GO:0055085: transmembrane transport | 1.70E-02 |
| 145 | GO:0071369: cellular response to ethylene stimulus | 1.74E-02 |
| 146 | GO:0001944: vasculature development | 1.74E-02 |
| 147 | GO:0006012: galactose metabolic process | 1.74E-02 |
| 148 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.74E-02 |
| 149 | GO:0010082: regulation of root meristem growth | 1.74E-02 |
| 150 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.95E-02 |
| 151 | GO:0008033: tRNA processing | 2.07E-02 |
| 152 | GO:0034220: ion transmembrane transport | 2.07E-02 |
| 153 | GO:0010051: xylem and phloem pattern formation | 2.07E-02 |
| 154 | GO:0000226: microtubule cytoskeleton organization | 2.07E-02 |
| 155 | GO:0000271: polysaccharide biosynthetic process | 2.07E-02 |
| 156 | GO:0006342: chromatin silencing | 2.18E-02 |
| 157 | GO:0006662: glycerol ether metabolic process | 2.18E-02 |
| 158 | GO:0007059: chromosome segregation | 2.29E-02 |
| 159 | GO:0048544: recognition of pollen | 2.29E-02 |
| 160 | GO:0008654: phospholipid biosynthetic process | 2.41E-02 |
| 161 | GO:0009851: auxin biosynthetic process | 2.41E-02 |
| 162 | GO:0048825: cotyledon development | 2.41E-02 |
| 163 | GO:0032502: developmental process | 2.65E-02 |
| 164 | GO:0009630: gravitropism | 2.65E-02 |
| 165 | GO:0016032: viral process | 2.65E-02 |
| 166 | GO:0040008: regulation of growth | 2.70E-02 |
| 167 | GO:0071281: cellular response to iron ion | 2.78E-02 |
| 168 | GO:0045490: pectin catabolic process | 2.83E-02 |
| 169 | GO:0009451: RNA modification | 2.89E-02 |
| 170 | GO:0009828: plant-type cell wall loosening | 2.90E-02 |
| 171 | GO:0051607: defense response to virus | 3.16E-02 |
| 172 | GO:0000910: cytokinesis | 3.16E-02 |
| 173 | GO:0007166: cell surface receptor signaling pathway | 3.23E-02 |
| 174 | GO:0009911: positive regulation of flower development | 3.29E-02 |
| 175 | GO:0001666: response to hypoxia | 3.29E-02 |
| 176 | GO:0008380: RNA splicing | 3.37E-02 |
| 177 | GO:0009816: defense response to bacterium, incompatible interaction | 3.42E-02 |
| 178 | GO:0009627: systemic acquired resistance | 3.56E-02 |
| 179 | GO:0006974: cellular response to DNA damage stimulus | 3.56E-02 |
| 180 | GO:0048481: plant ovule development | 3.97E-02 |
| 181 | GO:0030244: cellulose biosynthetic process | 3.97E-02 |
| 182 | GO:0009733: response to auxin | 4.00E-02 |
| 183 | GO:0006811: ion transport | 4.26E-02 |
| 184 | GO:0009793: embryo development ending in seed dormancy | 4.43E-02 |
| 185 | GO:0045087: innate immune response | 4.70E-02 |
| 186 | GO:0034599: cellular response to oxidative stress | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047661: amino-acid racemase activity | 0.00E+00 |
| 2 | GO:0004636: phosphoribosyl-ATP diphosphatase activity | 0.00E+00 |
| 3 | GO:0015267: channel activity | 0.00E+00 |
| 4 | GO:0004635: phosphoribosyl-AMP cyclohydrolase activity | 0.00E+00 |
| 5 | GO:0043864: indoleacetamide hydrolase activity | 0.00E+00 |
| 6 | GO:0047912: galacturonokinase activity | 0.00E+00 |
| 7 | GO:0004588: orotate phosphoribosyltransferase activity | 0.00E+00 |
| 8 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 9 | GO:0004590: orotidine-5'-phosphate decarboxylase activity | 0.00E+00 |
| 10 | GO:0004823: leucine-tRNA ligase activity | 0.00E+00 |
| 11 | GO:0003747: translation release factor activity | 1.07E-05 |
| 12 | GO:0016149: translation release factor activity, codon specific | 2.46E-05 |
| 13 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 2.55E-04 |
| 14 | GO:0004830: tryptophan-tRNA ligase activity | 2.55E-04 |
| 15 | GO:0010285: L,L-diaminopimelate aminotransferase activity | 2.55E-04 |
| 16 | GO:0033984: indole-3-glycerol-phosphate lyase activity | 2.55E-04 |
| 17 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 2.55E-04 |
| 18 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 5.64E-04 |
| 19 | GO:0003919: FMN adenylyltransferase activity | 5.64E-04 |
| 20 | GO:0016829: lyase activity | 7.09E-04 |
| 21 | GO:0005262: calcium channel activity | 7.37E-04 |
| 22 | GO:0010329: auxin efflux transmembrane transporter activity | 7.37E-04 |
| 23 | GO:0052692: raffinose alpha-galactosidase activity | 9.15E-04 |
| 24 | GO:0070180: large ribosomal subunit rRNA binding | 9.15E-04 |
| 25 | GO:0070330: aromatase activity | 9.15E-04 |
| 26 | GO:0002161: aminoacyl-tRNA editing activity | 9.15E-04 |
| 27 | GO:0004557: alpha-galactosidase activity | 9.15E-04 |
| 28 | GO:0043023: ribosomal large subunit binding | 1.31E-03 |
| 29 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 1.31E-03 |
| 30 | GO:0001872: (1->3)-beta-D-glucan binding | 1.31E-03 |
| 31 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 1.31E-03 |
| 32 | GO:0035197: siRNA binding | 1.31E-03 |
| 33 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 1.31E-03 |
| 34 | GO:0004176: ATP-dependent peptidase activity | 1.37E-03 |
| 35 | GO:0030570: pectate lyase activity | 1.63E-03 |
| 36 | GO:0008891: glycolate oxidase activity | 1.75E-03 |
| 37 | GO:0004335: galactokinase activity | 1.75E-03 |
| 38 | GO:0004659: prenyltransferase activity | 1.75E-03 |
| 39 | GO:0004834: tryptophan synthase activity | 1.75E-03 |
| 40 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.75E-03 |
| 41 | GO:0043015: gamma-tubulin binding | 1.75E-03 |
| 42 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 1.75E-03 |
| 43 | GO:0019199: transmembrane receptor protein kinase activity | 1.75E-03 |
| 44 | GO:0042277: peptide binding | 1.75E-03 |
| 45 | GO:0004392: heme oxygenase (decyclizing) activity | 1.75E-03 |
| 46 | GO:0004812: aminoacyl-tRNA ligase activity | 1.92E-03 |
| 47 | GO:0018685: alkane 1-monooxygenase activity | 2.23E-03 |
| 48 | GO:0004040: amidase activity | 2.23E-03 |
| 49 | GO:0030983: mismatched DNA binding | 2.75E-03 |
| 50 | GO:0004605: phosphatidate cytidylyltransferase activity | 2.75E-03 |
| 51 | GO:0080030: methyl indole-3-acetate esterase activity | 2.75E-03 |
| 52 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 2.75E-03 |
| 53 | GO:0004332: fructose-bisphosphate aldolase activity | 2.75E-03 |
| 54 | GO:0004656: procollagen-proline 4-dioxygenase activity | 3.30E-03 |
| 55 | GO:0008195: phosphatidate phosphatase activity | 3.30E-03 |
| 56 | GO:0003730: mRNA 3'-UTR binding | 3.30E-03 |
| 57 | GO:0019843: rRNA binding | 3.65E-03 |
| 58 | GO:0019899: enzyme binding | 3.89E-03 |
| 59 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 5.18E-03 |
| 60 | GO:0009672: auxin:proton symporter activity | 6.58E-03 |
| 61 | GO:0004805: trehalose-phosphatase activity | 7.33E-03 |
| 62 | GO:0008327: methyl-CpG binding | 8.11E-03 |
| 63 | GO:0004185: serine-type carboxypeptidase activity | 8.47E-03 |
| 64 | GO:0004521: endoribonuclease activity | 8.92E-03 |
| 65 | GO:0043621: protein self-association | 9.16E-03 |
| 66 | GO:0004089: carbonate dehydratase activity | 9.75E-03 |
| 67 | GO:0004565: beta-galactosidase activity | 9.75E-03 |
| 68 | GO:0015266: protein channel activity | 9.75E-03 |
| 69 | GO:0016788: hydrolase activity, acting on ester bonds | 9.81E-03 |
| 70 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.06E-02 |
| 71 | GO:0031418: L-ascorbic acid binding | 1.34E-02 |
| 72 | GO:0004650: polygalacturonase activity | 1.49E-02 |
| 73 | GO:0016760: cellulose synthase (UDP-forming) activity | 1.74E-02 |
| 74 | GO:0003727: single-stranded RNA binding | 1.85E-02 |
| 75 | GO:0047134: protein-disulfide reductase activity | 1.95E-02 |
| 76 | GO:0004791: thioredoxin-disulfide reductase activity | 2.29E-02 |
| 77 | GO:0010181: FMN binding | 2.29E-02 |
| 78 | GO:0004519: endonuclease activity | 2.29E-02 |
| 79 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.64E-02 |
| 80 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.78E-02 |
| 81 | GO:0016759: cellulose synthase activity | 2.90E-02 |
| 82 | GO:0003684: damaged DNA binding | 2.90E-02 |
| 83 | GO:0016791: phosphatase activity | 2.90E-02 |
| 84 | GO:0008017: microtubule binding | 2.96E-02 |
| 85 | GO:0008483: transaminase activity | 3.03E-02 |
| 86 | GO:0008237: metallopeptidase activity | 3.03E-02 |
| 87 | GO:0016597: amino acid binding | 3.16E-02 |
| 88 | GO:0015250: water channel activity | 3.29E-02 |
| 89 | GO:0030247: polysaccharide binding | 3.70E-02 |
| 90 | GO:0008236: serine-type peptidase activity | 3.83E-02 |
| 91 | GO:0005215: transporter activity | 3.91E-02 |
| 92 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.97E-02 |
| 93 | GO:0015238: drug transmembrane transporter activity | 4.12E-02 |
| 94 | GO:0008168: methyltransferase activity | 4.20E-02 |
| 95 | GO:0004222: metalloendopeptidase activity | 4.26E-02 |
| 96 | GO:0030145: manganese ion binding | 4.41E-02 |
| 97 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 4.41E-02 |
| 98 | GO:0003993: acid phosphatase activity | 4.85E-02 |