gene detail

Gene description

TAIR ID: AT1G18870

Short description: isochorismate synthase 2

Pathogen responsiveness: -0.70

General responsiveness: 0.62

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G022837

Wheat: No orthologous gene

GO biological process

phylloquinone biosynthetic process, defense response, biosynthetic process, tetrahydrofolate biosynthetic process, salicylic acid biosynthetic process

GO cellular component

chloroplast, plastid

GO molecular function

isochorismate synthase activity, 4-amino-4-deoxychorismate synthase activity

Protein domain

Pfam	PF00425, chorismate binding enzyme

Metabolic pathway

PWY-6406: salicylate biosynthesis I
PWY-5791: 1,4-dihydroxy-2-naphthoate biosynthesis II (plants)
PWY-5863: superpathway of phylloquinol biosynthesis

KEGG pathway

PATH:ath00130: Ubiquinone and other terpenoid-quinone biosynthesis
PATH:ath00903: Limonene and pinene degradation

Transcriptional regulation

Regulator:
AT4G18770, AT1G24260

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view

Differentially expressed condition

10 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.50	1.29E-03
GSE37269	Di2, WT, control	Di2, WT, TEV 21 d	-3.70	6.84E-09
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.77	3.39E-06
GSE37269	Ler0, WT, control	Ler0, WT, TEV 21 d	-2.20	7.41E-05
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-3.24	2.20E-08
GSE37269	Wt1, WT, control	Wt1, WT, TEV 21 d	-2.86	3.36E-06
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	-1.69	2.18E-08
GSE5686	Col, WT, control 5 d	Col, WT, G.orontii 5 d	-1.64	2.71E-04
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	-1.58	9.45E-05
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 90-105 min	-1.64	3.86E-02