gene detail

Gene description

TAIR ID: AT1G13280

Short description: allene oxide cyclase 4

Pathogen responsiveness: -0.77

General responsiveness: -0.33

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat:

GO biological process

jasmonic acid biosynthetic process

GO cellular component

chloroplast, plasma membrane

GO molecular function

allene-oxide cyclase activity

Protein domain

Pfam	PF06351, Allene oxide cyclase

Metabolic pathway

PWY-735: jasmonic acid biosynthesis

KEGG pathway

PATH:ath00592: alpha-Linolenic acid metabolism

Transcriptional regulation

Regulator:
AT1G51600, AT5G13790, AT1G24260, AT2G43010

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

Coexpression network

Differentially expressed condition

9 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Flg22 1 h	-1.61	2.54E-04
GSE17464	Laer, control	Laer, Flg22 2 h	-1.94	2.40E-05
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	1.63	2.18E-04
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.78	3.59E-05
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-2.22	2.26E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.77	3.63E-12
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.72	1.20E-02
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	1.82	1.72E-02
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-2.38	1.25E-03