Gene: AT1G10960
     


Gene description


TAIR ID: AT1G10960

Short description: ferredoxin 1

Pathogen responsiveness: -0.38

General responsiveness: 1.75

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat:

TA.8020.2.S1_A_AT  TA.8020.2.S1_X_AT  


GO biological process


electron transport chain, response to karrikin


GO cellular component


chloroplast stroma, chloroplast


GO molecular function


metal ion binding, electron carrier activity, 2 iron, 2 sulfur cluster binding


Protein domain


PfamPF00111, 2Fe-2S iron-sulfur cluster binding domain

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT5G13790, AT5G11260, AT2G43010

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


13 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h-1.678.02E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.078.19E-13
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.391.54E-03
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-3.233.75E-06
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-3.081.35E-19
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-1.861.58E-09
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.711.84E-08
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.129.43E-12
GSE56094Col, WT, control 5 hCol, WT, PstDC3000 5 h-1.572.69E-06
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h-1.711.17E-07
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.924.14E-09
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-2.181.02E-11
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.702.24E-05






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