co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G10960

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046460: neutral lipid biosynthetic process	0.00E+00
2	GO:0046294: formaldehyde catabolic process	0.00E+00
3	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	7.67E-08
4	GO:0034971: histone H3-R17 methylation	3.37E-05
5	GO:0034970: histone H3-R2 methylation	3.37E-05
6	GO:0034972: histone H3-R26 methylation	3.37E-05
7	GO:1902265: abscisic acid homeostasis	3.37E-05
8	GO:0007154: cell communication	8.48E-05
9	GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine	8.48E-05
10	GO:0071492: cellular response to UV-A	1.47E-04
11	GO:0044375: regulation of peroxisome size	1.47E-04
12	GO:0031022: nuclear migration along microfilament	1.47E-04
13	GO:0016126: sterol biosynthetic process	2.81E-04
14	GO:0009902: chloroplast relocation	2.95E-04
15	GO:0071486: cellular response to high light intensity	2.95E-04
16	GO:0009765: photosynthesis, light harvesting	2.95E-04
17	GO:0006796: phosphate-containing compound metabolic process	4.63E-04
18	GO:0010304: PSII associated light-harvesting complex II catabolic process	4.63E-04
19	GO:0009903: chloroplast avoidance movement	5.53E-04
20	GO:0010019: chloroplast-nucleus signaling pathway	5.53E-04
21	GO:0034389: lipid particle organization	5.53E-04
22	GO:0016559: peroxisome fission	7.44E-04
23	GO:0009787: regulation of abscisic acid-activated signaling pathway	7.44E-04
24	GO:0010100: negative regulation of photomorphogenesis	8.45E-04
25	GO:0032544: plastid translation	8.45E-04
26	GO:0022900: electron transport chain	8.45E-04
27	GO:0046916: cellular transition metal ion homeostasis	9.49E-04
28	GO:0015780: nucleotide-sugar transport	9.49E-04
29	GO:0019432: triglyceride biosynthetic process	9.49E-04
30	GO:0051555: flavonol biosynthetic process	1.17E-03
31	GO:0043085: positive regulation of catalytic activity	1.28E-03
32	GO:0018119: peptidyl-cysteine S-nitrosylation	1.28E-03
33	GO:0030048: actin filament-based movement	1.52E-03
34	GO:0006108: malate metabolic process	1.52E-03
35	GO:0007031: peroxisome organization	1.78E-03
36	GO:0006071: glycerol metabolic process	1.91E-03
37	GO:0019915: lipid storage	2.33E-03
38	GO:0006012: galactose metabolic process	2.63E-03
39	GO:0009693: ethylene biosynthetic process	2.63E-03
40	GO:0006520: cellular amino acid metabolic process	3.25E-03
41	GO:0010029: regulation of seed germination	5.02E-03
42	GO:0015995: chlorophyll biosynthetic process	5.40E-03
43	GO:0005975: carbohydrate metabolic process	5.45E-03
44	GO:0009637: response to blue light	6.82E-03
45	GO:0006099: tricarboxylic acid cycle	7.04E-03
46	GO:0030001: metal ion transport	7.47E-03
47	GO:0008643: carbohydrate transport	8.60E-03
48	GO:0009585: red, far-red light phototransduction	1.00E-02
49	GO:0051603: proteolysis involved in cellular protein catabolic process	1.03E-02
50	GO:0009909: regulation of flower development	1.08E-02
51	GO:0006508: proteolysis	1.33E-02
52	GO:0009058: biosynthetic process	1.56E-02
53	GO:0042742: defense response to bacterium	1.87E-02
54	GO:0010228: vegetative to reproductive phase transition of meristem	1.96E-02
55	GO:0006970: response to osmotic stress	2.72E-02
56	GO:0046686: response to cadmium ion	2.91E-02
57	GO:0080167: response to karrikin	3.01E-02
58	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.08E-02
59	GO:0046777: protein autophosphorylation	3.16E-02
60	GO:0009408: response to heat	3.97E-02
61	GO:0006281: DNA repair	3.97E-02

Rank	GO Term	Adjusted P value
1	GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity	0.00E+00
2	GO:0018738: S-formylglutathione hydrolase activity	0.00E+00
3	GO:0000254: C-4 methylsterol oxidase activity	7.25E-07
4	GO:0008793: aromatic-amino-acid:2-oxoglutarate aminotransferase activity	3.37E-05
5	GO:0046906: tetrapyrrole binding	3.37E-05
6	GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity	8.48E-05
7	GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity	8.48E-05
8	GO:0035241: protein-arginine omega-N monomethyltransferase activity	8.48E-05
9	GO:0008469: histone-arginine N-methyltransferase activity	1.47E-04
10	GO:0004848: ureidoglycolate hydrolase activity	1.47E-04
11	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	4.63E-04
12	GO:0004144: diacylglycerol O-acyltransferase activity	5.53E-04
13	GO:0030060: L-malate dehydrogenase activity	5.53E-04
14	GO:0004185: serine-type carboxypeptidase activity	5.92E-04
15	GO:0019899: enzyme binding	6.47E-04
16	GO:0005338: nucleotide-sugar transmembrane transporter activity	6.47E-04
17	GO:0004427: inorganic diphosphatase activity	6.47E-04
18	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	7.44E-04
19	GO:0004034: aldose 1-epimerase activity	7.44E-04
20	GO:0046914: transition metal ion binding	8.45E-04
21	GO:0031072: heat shock protein binding	1.52E-03
22	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.65E-03
23	GO:0004176: ATP-dependent peptidase activity	2.33E-03
24	GO:0016853: isomerase activity	3.42E-03
25	GO:0003824: catalytic activity	3.62E-03
26	GO:0048038: quinone binding	3.76E-03
27	GO:0008483: transaminase activity	4.46E-03
28	GO:0008237: metallopeptidase activity	4.46E-03
29	GO:0016168: chlorophyll binding	5.02E-03
30	GO:0030247: polysaccharide binding	5.40E-03
31	GO:0008236: serine-type peptidase activity	5.60E-03
32	GO:0004222: metalloendopeptidase activity	6.20E-03
33	GO:0051537: 2 iron, 2 sulfur cluster binding	8.60E-03
34	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.21E-02
35	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.21E-02
36	GO:0022857: transmembrane transporter activity	1.23E-02
37	GO:0051082: unfolded protein binding	1.28E-02
38	GO:0030170: pyridoxal phosphate binding	1.62E-02
39	GO:0015297: antiporter activity	1.83E-02
40	GO:0008194: UDP-glycosyltransferase activity	2.05E-02
41	GO:0042802: identical protein binding	2.24E-02
42	GO:0008168: methyltransferase activity	2.51E-02
43	GO:0000287: magnesium ion binding	2.55E-02
44	GO:0046982: protein heterodimerization activity	2.55E-02
45	GO:0016788: hydrolase activity, acting on ester bonds	2.62E-02
46	GO:0052689: carboxylic ester hydrolase activity	3.23E-02
47	GO:0042803: protein homodimerization activity	3.54E-02
48	GO:0004871: signal transducer activity	3.54E-02
49	GO:0003735: structural constituent of ribosome	3.71E-02
50	GO:0009055: electron carrier activity	4.18E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	1.22E-07
2	GO:0009535: chloroplast thylakoid membrane	4.31E-06
3	GO:0005811: lipid particle	8.45E-04
4	GO:0005779: integral component of peroxisomal membrane	8.45E-04
5	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	9.49E-04
6	GO:0005764: lysosome	1.65E-03
7	GO:0015935: small ribosomal subunit	2.33E-03
8	GO:0009523: photosystem II	3.59E-03
9	GO:0005778: peroxisomal membrane	4.46E-03
10	GO:0005789: endoplasmic reticulum membrane	5.50E-03
11	GO:0005777: peroxisome	1.06E-02
12	GO:0009579: thylakoid	1.10E-02
13	GO:0009534: chloroplast thylakoid	1.11E-02
14	GO:0009543: chloroplast thylakoid lumen	1.51E-02
15	GO:0005623: cell	1.54E-02
16	GO:0005759: mitochondrial matrix	1.77E-02
17	GO:0009536: plastid	2.29E-02
18	GO:0046658: anchored component of plasma membrane	2.31E-02
19	GO:0005773: vacuole	2.66E-02
20	GO:0031969: chloroplast membrane	3.01E-02
21	GO:0005743: mitochondrial inner membrane	3.77E-02
22	GO:0005829: cytosol	3.83E-02
23	GO:0043231: intracellular membrane-bounded organelle	4.26E-02