Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G10960

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0015822: ornithine transport0.00E+00
2GO:0080094: response to trehalose-6-phosphate0.00E+00
3GO:0009715: chalcone biosynthetic process0.00E+00
4GO:0010336: gibberellic acid homeostasis0.00E+00
5GO:0010423: negative regulation of brassinosteroid biosynthetic process0.00E+00
6GO:0090393: sepal giant cell development0.00E+00
7GO:0019265: glycine biosynthetic process, by transamination of glyoxylate0.00E+00
8GO:0071370: cellular response to gibberellin stimulus0.00E+00
9GO:0080167: response to karrikin4.67E-06
10GO:0019464: glycine decarboxylation via glycine cleavage system3.17E-05
11GO:0006546: glycine catabolic process3.17E-05
12GO:0009813: flavonoid biosynthetic process3.91E-05
13GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity1.04E-04
14GO:0010076: maintenance of floral meristem identity1.04E-04
15GO:0071555: cell wall organization1.14E-04
16GO:0045489: pectin biosynthetic process1.43E-04
17GO:0016119: carotene metabolic process2.09E-04
18GO:1901349: glucosinolate transport2.09E-04
19GO:0090449: phloem glucosinolate loading2.09E-04
20GO:0006169: adenosine salvage2.09E-04
21GO:0006659: phosphatidylserine biosynthetic process2.09E-04
22GO:0048438: floral whorl development2.09E-04
23GO:0000066: mitochondrial ornithine transport2.09E-04
24GO:0006810: transport3.29E-04
25GO:0030388: fructose 1,6-bisphosphate metabolic process4.66E-04
26GO:2000123: positive regulation of stomatal complex development4.66E-04
27GO:0010275: NAD(P)H dehydrogenase complex assembly4.66E-04
28GO:0009629: response to gravity4.66E-04
29GO:0015712: hexose phosphate transport4.66E-04
30GO:0007154: cell communication4.66E-04
31GO:0010220: positive regulation of vernalization response4.66E-04
32GO:0009767: photosynthetic electron transport chain5.58E-04
33GO:0019253: reductive pentose-phosphate cycle6.29E-04
34GO:0005985: sucrose metabolic process7.02E-04
35GO:0006000: fructose metabolic process7.59E-04
36GO:0035436: triose phosphate transmembrane transport7.59E-04
37GO:0044375: regulation of peroxisome size7.59E-04
38GO:0051016: barbed-end actin filament capping1.08E-03
39GO:0042823: pyridoxal phosphate biosynthetic process1.08E-03
40GO:0032877: positive regulation of DNA endoreduplication1.08E-03
41GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.08E-03
42GO:0006857: oligopeptide transport1.32E-03
43GO:0048442: sepal development1.44E-03
44GO:0009765: photosynthesis, light harvesting1.44E-03
45GO:2000038: regulation of stomatal complex development1.44E-03
46GO:0015713: phosphoglycerate transport1.44E-03
47GO:0006021: inositol biosynthetic process1.44E-03
48GO:0034613: cellular protein localization1.44E-03
49GO:0009694: jasmonic acid metabolic process1.44E-03
50GO:0006542: glutamine biosynthetic process1.44E-03
51GO:0019676: ammonia assimilation cycle1.44E-03
52GO:0016123: xanthophyll biosynthetic process1.83E-03
53GO:0044209: AMP salvage1.83E-03
54GO:0010375: stomatal complex patterning1.83E-03
55GO:0071554: cell wall organization or biogenesis2.07E-03
56GO:0010264: myo-inositol hexakisphosphate biosynthetic process2.26E-03
57GO:0006559: L-phenylalanine catabolic process2.26E-03
58GO:0000060: protein import into nucleus, translocation2.26E-03
59GO:0009117: nucleotide metabolic process2.26E-03
60GO:0009635: response to herbicide2.26E-03
61GO:0050665: hydrogen peroxide biosynthetic process2.26E-03
62GO:0010304: PSII associated light-harvesting complex II catabolic process2.26E-03
63GO:0007267: cell-cell signaling2.66E-03
64GO:0010077: maintenance of inflorescence meristem identity2.71E-03
65GO:0017148: negative regulation of translation2.71E-03
66GO:0009854: oxidative photosynthetic carbon pathway2.71E-03
67GO:0042128: nitrate assimilation3.32E-03
68GO:0016559: peroxisome fission3.71E-03
69GO:0007155: cell adhesion3.71E-03
70GO:0045010: actin nucleation3.71E-03
71GO:0031540: regulation of anthocyanin biosynthetic process3.71E-03
72GO:0052543: callose deposition in cell wall3.71E-03
73GO:0006002: fructose 6-phosphate metabolic process4.24E-03
74GO:0010218: response to far red light4.28E-03
75GO:0006754: ATP biosynthetic process4.80E-03
76GO:0048589: developmental growth4.80E-03
77GO:0009056: catabolic process4.80E-03
78GO:0009853: photorespiration4.91E-03
79GO:0016051: carbohydrate biosynthetic process4.91E-03
80GO:0010192: mucilage biosynthetic process5.99E-03
81GO:0051555: flavonol biosynthetic process5.99E-03
82GO:0048441: petal development5.99E-03
83GO:0010114: response to red light6.33E-03
84GO:0042546: cell wall biogenesis6.59E-03
85GO:0009773: photosynthetic electron transport in photosystem I6.62E-03
86GO:0019684: photosynthesis, light reaction6.62E-03
87GO:0000272: polysaccharide catabolic process6.62E-03
88GO:0016024: CDP-diacylglycerol biosynthetic process7.28E-03
89GO:0015706: nitrate transport7.28E-03
90GO:0010582: floral meristem determinacy7.28E-03
91GO:0016925: protein sumoylation7.28E-03
92GO:0007049: cell cycle7.60E-03
93GO:0000165: MAPK cascade7.66E-03
94GO:0009611: response to wounding7.88E-03
95GO:0006094: gluconeogenesis7.96E-03
96GO:0005986: sucrose biosynthetic process7.96E-03
97GO:0030036: actin cytoskeleton organization7.96E-03
98GO:0009725: response to hormone7.96E-03
99GO:0048768: root hair cell tip growth8.66E-03
100GO:0010143: cutin biosynthetic process8.66E-03
101GO:0048440: carpel development8.66E-03
102GO:0051301: cell division8.68E-03
103GO:0010224: response to UV-B8.83E-03
104GO:0007031: peroxisome organization9.37E-03
105GO:0010167: response to nitrate9.37E-03
106GO:0009833: plant-type primary cell wall biogenesis1.01E-02
107GO:0006833: water transport1.01E-02
108GO:0007010: cytoskeleton organization1.09E-02
109GO:0009695: jasmonic acid biosynthetic process1.17E-02
110GO:0009768: photosynthesis, light harvesting in photosystem I1.17E-02
111GO:0031408: oxylipin biosynthetic process1.25E-02
112GO:0051726: regulation of cell cycle1.29E-02
113GO:0005975: carbohydrate metabolic process1.34E-02
114GO:0046686: response to cadmium ion1.40E-02
115GO:0009411: response to UV1.41E-02
116GO:0040007: growth1.41E-02
117GO:0048443: stamen development1.50E-02
118GO:0019722: calcium-mediated signaling1.50E-02
119GO:0008152: metabolic process1.62E-02
120GO:0015991: ATP hydrolysis coupled proton transport1.68E-02
121GO:0000271: polysaccharide biosynthetic process1.68E-02
122GO:0080022: primary root development1.68E-02
123GO:0034220: ion transmembrane transport1.68E-02
124GO:0006520: cellular amino acid metabolic process1.77E-02
125GO:0007059: chromosome segregation1.86E-02
126GO:0015986: ATP synthesis coupled proton transport1.86E-02
127GO:0009791: post-embryonic development1.96E-02
128GO:0019252: starch biosynthetic process1.96E-02
129GO:0008654: phospholipid biosynthetic process1.96E-02
130GO:0048510: regulation of timing of transition from vegetative to reproductive phase2.06E-02
131GO:0007264: small GTPase mediated signal transduction2.15E-02
132GO:0010583: response to cyclopentenone2.15E-02
133GO:0016032: viral process2.15E-02
134GO:1901657: glycosyl compound metabolic process2.25E-02
135GO:0016125: sterol metabolic process2.36E-02
136GO:0030154: cell differentiation2.50E-02
137GO:0009617: response to bacterium2.52E-02
138GO:0051607: defense response to virus2.57E-02
139GO:0009911: positive regulation of flower development2.67E-02
140GO:0009788: negative regulation of abscisic acid-activated signaling pathway2.78E-02
141GO:0048573: photoperiodism, flowering3.00E-02
142GO:0045944: positive regulation of transcription from RNA polymerase II promoter3.03E-02
143GO:0016311: dephosphorylation3.11E-02
144GO:0009817: defense response to fungus, incompatible interaction3.23E-02
145GO:0030244: cellulose biosynthetic process3.23E-02
146GO:0018298: protein-chromophore linkage3.23E-02
147GO:0048767: root hair elongation3.34E-02
148GO:0009832: plant-type cell wall biogenesis3.34E-02
149GO:0009407: toxin catabolic process3.46E-02
150GO:0010119: regulation of stomatal movement3.58E-02
151GO:0007568: aging3.58E-02
152GO:0009867: jasmonic acid mediated signaling pathway3.82E-02
153GO:0009637: response to blue light3.82E-02
154GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.18E-02
155GO:0006839: mitochondrial transport4.19E-02
156GO:0006631: fatty acid metabolic process4.32E-02
157GO:0009926: auxin polar transport4.57E-02
158GO:0009744: response to sucrose4.57E-02
159GO:0009636: response to toxic substance4.97E-02
RankGO TermAdjusted P value
1GO:0050281: serine-glyoxylate transaminase activity0.00E+00
2GO:0016210: naringenin-chalcone synthase activity0.00E+00
3GO:0004760: serine-pyruvate transaminase activity0.00E+00
4GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
5GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity0.00E+00
6GO:0030795: jasmonate O-methyltransferase activity0.00E+00
7GO:0102078: methyl jasmonate methylesterase activity0.00E+00
8GO:1990055: phenylacetaldehyde synthase activity0.00E+00
9GO:0004375: glycine dehydrogenase (decarboxylating) activity1.73E-05
10GO:0045430: chalcone isomerase activity3.17E-05
11GO:0016757: transferase activity, transferring glycosyl groups7.22E-05
12GO:0008429: phosphatidylethanolamine binding7.50E-05
13GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity1.04E-04
14GO:0019901: protein kinase binding1.75E-04
15GO:0010313: phytochrome binding2.09E-04
16GO:0004001: adenosine kinase activity2.09E-04
17GO:0090448: glucosinolate:proton symporter activity2.09E-04
18GO:0004837: tyrosine decarboxylase activity2.09E-04
19GO:0045486: naringenin 3-dioxygenase activity2.09E-04
20GO:0016759: cellulose synthase activity2.52E-04
21GO:0004575: sucrose alpha-glucosidase activity3.16E-04
22GO:0004860: protein kinase inhibitor activity4.29E-04
23GO:0004047: aminomethyltransferase activity4.66E-04
24GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity4.66E-04
25GO:0000064: L-ornithine transmembrane transporter activity4.66E-04
26GO:0004512: inositol-3-phosphate synthase activity4.66E-04
27GO:0048531: beta-1,3-galactosyltransferase activity4.66E-04
28GO:0010291: carotene beta-ring hydroxylase activity4.66E-04
29GO:0004618: phosphoglycerate kinase activity4.66E-04
30GO:0004148: dihydrolipoyl dehydrogenase activity7.59E-04
31GO:0071917: triose-phosphate transmembrane transporter activity7.59E-04
32GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity1.08E-03
33GO:0001872: (1->3)-beta-D-glucan binding1.08E-03
34GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity1.08E-03
35GO:0048027: mRNA 5'-UTR binding1.08E-03
36GO:0035529: NADH pyrophosphatase activity1.08E-03
37GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity1.08E-03
38GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.44E-03
39GO:0008453: alanine-glyoxylate transaminase activity1.44E-03
40GO:0098599: palmitoyl hydrolase activity1.44E-03
41GO:0046527: glucosyltransferase activity1.44E-03
42GO:0008891: glycolate oxidase activity1.44E-03
43GO:0015120: phosphoglycerate transmembrane transporter activity1.44E-03
44GO:0045431: flavonol synthase activity1.83E-03
45GO:0031386: protein tag1.83E-03
46GO:0004356: glutamate-ammonia ligase activity1.83E-03
47GO:0005215: transporter activity2.22E-03
48GO:0080030: methyl indole-3-acetate esterase activity2.26E-03
49GO:0008474: palmitoyl-(protein) hydrolase activity2.26E-03
50GO:0004366: glycerol-3-phosphate O-acyltransferase activity2.26E-03
51GO:0102229: amylopectin maltohydrolase activity2.26E-03
52GO:0042578: phosphoric ester hydrolase activity2.26E-03
53GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity2.26E-03
54GO:0016787: hydrolase activity2.64E-03
55GO:0016740: transferase activity2.67E-03
56GO:0016161: beta-amylase activity2.71E-03
57GO:0016413: O-acetyltransferase activity2.82E-03
58GO:0016621: cinnamoyl-CoA reductase activity3.20E-03
59GO:0043295: glutathione binding3.20E-03
60GO:0030247: polysaccharide binding3.50E-03
61GO:0004564: beta-fructofuranosidase activity3.71E-03
62GO:0004693: cyclin-dependent protein serine/threonine kinase activity4.28E-03
63GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism4.80E-03
64GO:0015112: nitrate transmembrane transporter activity5.38E-03
65GO:0046982: protein heterodimerization activity6.45E-03
66GO:0047372: acylglycerol lipase activity6.62E-03
67GO:0046961: proton-transporting ATPase activity, rotational mechanism6.62E-03
68GO:0016788: hydrolase activity, acting on ester bonds6.77E-03
69GO:0042973: glucan endo-1,3-beta-D-glucosidase activity8.66E-03
70GO:0052689: carboxylic ester hydrolase activity9.88E-03
71GO:0031409: pigment binding1.01E-02
72GO:0031418: L-ascorbic acid binding1.09E-02
73GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.16E-02
74GO:0004176: ATP-dependent peptidase activity1.25E-02
75GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.33E-02
76GO:0016760: cellulose synthase (UDP-forming) activity1.41E-02
77GO:0016758: transferase activity, transferring hexosyl groups1.49E-02
78GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.74E-02
79GO:0005355: glucose transmembrane transporter activity1.86E-02
80GO:0010181: FMN binding1.86E-02
81GO:0004872: receptor activity1.96E-02
82GO:0015297: antiporter activity2.01E-02
83GO:0048038: quinone binding2.06E-02
84GO:0004518: nuclease activity2.15E-02
85GO:0051015: actin filament binding2.25E-02
86GO:0008194: UDP-glycosyltransferase activity2.36E-02
87GO:0016791: phosphatase activity2.36E-02
88GO:0008483: transaminase activity2.46E-02
89GO:0016722: oxidoreductase activity, oxidizing metal ions2.46E-02
90GO:0008237: metallopeptidase activity2.46E-02
91GO:0005200: structural constituent of cytoskeleton2.46E-02
92GO:0016887: ATPase activity2.48E-02
93GO:0003824: catalytic activity2.53E-02
94GO:0015250: water channel activity2.67E-02
95GO:0016168: chlorophyll binding2.78E-02
96GO:0102483: scopolin beta-glucosidase activity3.00E-02
97GO:0004222: metalloendopeptidase activity3.46E-02
98GO:0050897: cobalt ion binding3.58E-02
99GO:0003993: acid phosphatase activity3.94E-02
100GO:0008422: beta-glucosidase activity4.07E-02
101GO:0005515: protein binding4.21E-02
102GO:0004364: glutathione transferase activity4.45E-02
103GO:0005507: copper ion binding4.54E-02
104GO:0015293: symporter activity4.97E-02
RankGO TermAdjusted P value
1GO:0097708: intracellular vesicle0.00E+00
2GO:0009344: nitrite reductase complex [NAD(P)H]0.00E+00
3GO:0005775: vacuolar lumen1.73E-05
4GO:0005960: glycine cleavage complex1.73E-05
5GO:0005794: Golgi apparatus1.66E-04
6GO:0046658: anchored component of plasma membrane1.66E-04
7GO:0009507: chloroplast2.57E-04
8GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)2.65E-04
9GO:0000139: Golgi membrane2.66E-04
10GO:0031225: anchored component of membrane2.71E-04
11GO:0009535: chloroplast thylakoid membrane2.77E-04
12GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain4.66E-04
13GO:0016021: integral component of membrane5.39E-04
14GO:0030095: chloroplast photosystem II6.29E-04
15GO:0009579: thylakoid6.44E-04
16GO:0042406: extrinsic component of endoplasmic reticulum membrane7.59E-04
17GO:0009505: plant-type cell wall8.21E-04
18GO:0009654: photosystem II oxygen evolving complex9.49E-04
19GO:0048046: apoplast1.01E-03
20GO:0019898: extrinsic component of membrane1.94E-03
21GO:0009941: chloroplast envelope1.97E-03
22GO:0009543: chloroplast thylakoid lumen2.52E-03
23GO:0009534: chloroplast thylakoid2.62E-03
24GO:0005886: plasma membrane4.09E-03
25GO:0005779: integral component of peroxisomal membrane4.24E-03
26GO:0000325: plant-type vacuole4.48E-03
27GO:0009506: plasmodesma5.09E-03
28GO:0016020: membrane5.38E-03
29GO:0031902: late endosome membrane5.84E-03
30GO:0005765: lysosomal membrane6.62E-03
31GO:0005576: extracellular region8.45E-03
32GO:0005753: mitochondrial proton-transporting ATP synthase complex9.37E-03
33GO:0030076: light-harvesting complex9.37E-03
34GO:0009570: chloroplast stroma1.17E-02
35GO:0009522: photosystem I1.86E-02
36GO:0009523: photosystem II1.96E-02
37GO:0009705: plant-type vacuole membrane2.11E-02
38GO:0005778: peroxisomal membrane2.46E-02
39GO:0005777: peroxisome3.48E-02
40GO:0000786: nucleosome3.70E-02
41GO:0031969: chloroplast membrane4.04E-02
42GO:0005819: spindle4.07E-02
43GO:0005773: vacuole4.50E-02
44GO:0005856: cytoskeleton4.97E-02
Gene type



Gene DE type