Gene: AT1G08550
     

Gene description


TAIR ID: AT1G08550

Short description: non-photochemical quenching 1

Pathogen responsiveness: 0.01

General responsiveness: 1.91

Orthologous


Rice:

OS04G0379700  

Maize:

GRMZM2G027219  

Wheat: No orthologous gene

GO biological process


xanthophyll metabolic process, xanthophyll cycle, chlorophyll metabolic process, fatty acid metabolic process, response to heat, oxidation-reduction process


GO cellular component


chloroplast photosystem II, chloroplast, chloroplast thylakoid, chloroplast thylakoid lumen, thylakoid lumen, chloroplast thylakoid membrane


GO molecular function


violaxanthin de-epoxidase activity, protein binding


Protein domain


PfamPF07137, VDE lipocalin domain

Transcriptional regulation


Regulator:
AT3G16857, AT4G16110

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


20 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, ataf1, controlCol, ataf1, Bg h-1.811.33E-07
GSE17464Laer, controlLaer, Flg22 2 h-1.501.06E-02
GSE17464Penta, controlPenta, Flg22 2 h-2.056.40E-04
GSE17464Penta, controlPenta, Flg22 2 h-2.074.95E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-3.436.16E-09
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.064.32E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.533.93E-09
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.854.42E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.698.90E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.472.91E-12
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.896.51E-12
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-1.577.13E-03
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-1.872.77E-11
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-1.522.25E-07
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-1.515.16E-08
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-1.526.36E-08
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-1.671.85E-08
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-1.852.06E-10
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-1.589.34E-08
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-2.012.18E-03






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