Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G08550

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090042: tubulin deacetylation0.00E+00
2GO:0090627: plant epidermal cell differentiation0.00E+00
3GO:0090279: regulation of calcium ion import0.00E+00
4GO:0080127: fruit septum development0.00E+00
5GO:1905177: tracheary element differentiation0.00E+00
6GO:0071474: cellular hyperosmotic response0.00E+00
7GO:1905421: regulation of plant organ morphogenesis0.00E+00
8GO:0002184: cytoplasmic translational termination0.00E+00
9GO:0030155: regulation of cell adhesion0.00E+00
10GO:0000025: maltose catabolic process0.00E+00
11GO:0048437: floral organ development1.07E-04
12GO:0005980: glycogen catabolic process1.77E-04
13GO:0015671: oxygen transport1.77E-04
14GO:0032958: inositol phosphate biosynthetic process1.77E-04
15GO:0010480: microsporocyte differentiation1.77E-04
16GO:0000023: maltose metabolic process1.77E-04
17GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process1.77E-04
18GO:0009735: response to cytokinin2.27E-04
19GO:0005982: starch metabolic process2.51E-04
20GO:0009773: photosynthetic electron transport in photosystem I3.42E-04
21GO:0005983: starch catabolic process3.93E-04
22GO:0005976: polysaccharide metabolic process4.01E-04
23GO:0090342: regulation of cell aging4.01E-04
24GO:0006521: regulation of cellular amino acid metabolic process4.01E-04
25GO:0051262: protein tetramerization4.01E-04
26GO:0010102: lateral root morphogenesis4.47E-04
27GO:0006518: peptide metabolic process6.55E-04
28GO:0010623: programmed cell death involved in cell development6.55E-04
29GO:0080055: low-affinity nitrate transport6.55E-04
30GO:0048281: inflorescence morphogenesis6.55E-04
31GO:0005975: carbohydrate metabolic process7.50E-04
32GO:0007017: microtubule-based process7.64E-04
33GO:0003333: amino acid transmembrane transport8.37E-04
34GO:0061077: chaperone-mediated protein folding8.37E-04
35GO:0010148: transpiration9.34E-04
36GO:0010306: rhamnogalacturonan II biosynthetic process9.34E-04
37GO:0010731: protein glutathionylation9.34E-04
38GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly9.34E-04
39GO:0006020: inositol metabolic process9.34E-04
40GO:0010601: positive regulation of auxin biosynthetic process9.34E-04
41GO:0010508: positive regulation of autophagy1.24E-03
42GO:0051205: protein insertion into membrane1.24E-03
43GO:0015846: polyamine transport1.24E-03
44GO:0010021: amylopectin biosynthetic process1.24E-03
45GO:0006808: regulation of nitrogen utilization1.24E-03
46GO:0006109: regulation of carbohydrate metabolic process1.24E-03
47GO:0006662: glycerol ether metabolic process1.35E-03
48GO:0019252: starch biosynthetic process1.55E-03
49GO:0045038: protein import into chloroplast thylakoid membrane1.57E-03
50GO:0006461: protein complex assembly1.57E-03
51GO:0009913: epidermal cell differentiation1.94E-03
52GO:0010190: cytochrome b6f complex assembly1.94E-03
53GO:0003006: developmental process involved in reproduction1.94E-03
54GO:0042549: photosystem II stabilization1.94E-03
55GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1.94E-03
56GO:0000470: maturation of LSU-rRNA1.94E-03
57GO:0009409: response to cold2.09E-03
58GO:0042026: protein refolding2.32E-03
59GO:0006458: 'de novo' protein folding2.32E-03
60GO:0009861: jasmonic acid and ethylene-dependent systemic resistance2.32E-03
61GO:0070370: cellular heat acclimation2.74E-03
62GO:0010103: stomatal complex morphogenesis2.74E-03
63GO:0015995: chlorophyll biosynthetic process2.80E-03
64GO:0009817: defense response to fungus, incompatible interaction3.09E-03
65GO:0005978: glycogen biosynthetic process3.17E-03
66GO:0009787: regulation of abscisic acid-activated signaling pathway3.17E-03
67GO:0006353: DNA-templated transcription, termination3.17E-03
68GO:0009657: plastid organization3.63E-03
69GO:0001558: regulation of cell growth3.63E-03
70GO:0032544: plastid translation3.63E-03
71GO:0034599: cellular response to oxidative stress4.09E-03
72GO:0019432: triglyceride biosynthetic process4.10E-03
73GO:0048507: meristem development4.10E-03
74GO:0010206: photosystem II repair4.10E-03
75GO:0006783: heme biosynthetic process4.10E-03
76GO:0042742: defense response to bacterium4.32E-03
77GO:0042761: very long-chain fatty acid biosynthetic process4.60E-03
78GO:0006782: protoporphyrinogen IX biosynthetic process5.11E-03
79GO:0048829: root cap development5.11E-03
80GO:0019684: photosynthesis, light reaction5.65E-03
81GO:0009089: lysine biosynthetic process via diaminopimelate5.65E-03
82GO:0043085: positive regulation of catalytic activity5.65E-03
83GO:0048229: gametophyte development5.65E-03
84GO:0009684: indoleacetic acid biosynthetic process5.65E-03
85GO:0010015: root morphogenesis5.65E-03
86GO:0010582: floral meristem determinacy6.20E-03
87GO:0080167: response to karrikin6.49E-03
88GO:0006006: glucose metabolic process6.78E-03
89GO:0010075: regulation of meristem growth6.78E-03
90GO:0006094: gluconeogenesis6.78E-03
91GO:0009767: photosynthetic electron transport chain6.78E-03
92GO:0010020: chloroplast fission7.37E-03
93GO:0010207: photosystem II assembly7.37E-03
94GO:0009266: response to temperature stimulus7.37E-03
95GO:0009934: regulation of meristem structural organization7.37E-03
96GO:0048467: gynoecium development7.37E-03
97GO:0015979: photosynthesis7.68E-03
98GO:0043086: negative regulation of catalytic activity8.02E-03
99GO:0045454: cell redox homeostasis8.16E-03
100GO:0006810: transport8.45E-03
101GO:0010025: wax biosynthetic process8.61E-03
102GO:0009944: polarity specification of adaxial/abaxial axis9.26E-03
103GO:0051017: actin filament bundle assembly9.26E-03
104GO:0051302: regulation of cell division9.92E-03
105GO:0016575: histone deacetylation9.92E-03
106GO:0019748: secondary metabolic process1.13E-02
107GO:0009686: gibberellin biosynthetic process1.20E-02
108GO:0001944: vasculature development1.20E-02
109GO:0006012: galactose metabolic process1.20E-02
110GO:0008152: metabolic process1.21E-02
111GO:0010089: xylem development1.27E-02
112GO:0000413: protein peptidyl-prolyl isomerization1.43E-02
113GO:0048653: anther development1.43E-02
114GO:0048868: pollen tube development1.50E-02
115GO:0048825: cotyledon development1.66E-02
116GO:0009556: microsporogenesis1.66E-02
117GO:0030163: protein catabolic process1.91E-02
118GO:0071281: cellular response to iron ion1.91E-02
119GO:1901657: glycosyl compound metabolic process1.91E-02
120GO:0010027: thylakoid membrane organization2.27E-02
121GO:0016126: sterol biosynthetic process2.27E-02
122GO:0009607: response to biotic stimulus2.36E-02
123GO:0009627: systemic acquired resistance2.45E-02
124GO:0009658: chloroplast organization2.60E-02
125GO:0055114: oxidation-reduction process2.71E-02
126GO:0006970: response to osmotic stress2.80E-02
127GO:0009631: cold acclimation3.04E-02
128GO:0006865: amino acid transport3.14E-02
129GO:0006631: fatty acid metabolic process3.67E-02
130GO:0051707: response to other organism3.88E-02
131GO:0009965: leaf morphogenesis4.22E-02
132GO:0009664: plant-type cell wall organization4.56E-02
133GO:0042538: hyperosmotic salinity response4.56E-02
RankGO TermAdjusted P value
1GO:0051721: protein phosphatase 2A binding0.00E+00
2GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
3GO:0042903: tubulin deacetylase activity0.00E+00
4GO:0043864: indoleacetamide hydrolase activity0.00E+00
5GO:0004134: 4-alpha-glucanotransferase activity0.00E+00
6GO:0043014: alpha-tubulin binding0.00E+00
7GO:0009899: ent-kaurene synthase activity0.00E+00
8GO:0102193: protein-ribulosamine 3-kinase activity0.00E+00
9GO:0005528: FK506 binding3.50E-05
10GO:0003755: peptidyl-prolyl cis-trans isomerase activity7.90E-05
11GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity1.77E-04
12GO:0000828: inositol hexakisphosphate kinase activity1.77E-04
13GO:0004853: uroporphyrinogen decarboxylase activity1.77E-04
14GO:0004645: phosphorylase activity1.77E-04
15GO:0033857: diphosphoinositol-pentakisphosphate kinase activity1.77E-04
16GO:0005344: oxygen transporter activity1.77E-04
17GO:0000829: inositol heptakisphosphate kinase activity1.77E-04
18GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity1.77E-04
19GO:0005227: calcium activated cation channel activity1.77E-04
20GO:0008184: glycogen phosphorylase activity1.77E-04
21GO:0044183: protein binding involved in protein folding3.42E-04
22GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity4.01E-04
23GO:0003844: 1,4-alpha-glucan branching enzyme activity4.01E-04
24GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase4.01E-04
25GO:0016868: intramolecular transferase activity, phosphotransferases4.01E-04
26GO:0010297: heteropolysaccharide binding4.01E-04
27GO:0033201: alpha-1,4-glucan synthase activity4.01E-04
28GO:0004565: beta-galactosidase activity4.47E-04
29GO:0017150: tRNA dihydrouridine synthase activity6.55E-04
30GO:0045174: glutathione dehydrogenase (ascorbate) activity6.55E-04
31GO:0080054: low-affinity nitrate transmembrane transporter activity6.55E-04
32GO:0043169: cation binding6.55E-04
33GO:0004373: glycogen (starch) synthase activity6.55E-04
34GO:0004857: enzyme inhibitor activity6.94E-04
35GO:0043621: protein self-association6.98E-04
36GO:0015203: polyamine transmembrane transporter activity9.34E-04
37GO:0016851: magnesium chelatase activity9.34E-04
38GO:0048487: beta-tubulin binding9.34E-04
39GO:0043023: ribosomal large subunit binding9.34E-04
40GO:0047134: protein-disulfide reductase activity1.16E-03
41GO:0010328: auxin influx transmembrane transporter activity1.24E-03
42GO:0004506: squalene monooxygenase activity1.24E-03
43GO:0019199: transmembrane receptor protein kinase activity1.24E-03
44GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds1.24E-03
45GO:0009011: starch synthase activity1.24E-03
46GO:0042277: peptide binding1.24E-03
47GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.24E-03
48GO:0004791: thioredoxin-disulfide reductase activity1.44E-03
49GO:0004040: amidase activity1.57E-03
50GO:0048038: quinone binding1.65E-03
51GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.88E-03
52GO:2001070: starch binding1.94E-03
53GO:0004332: fructose-bisphosphate aldolase activity1.94E-03
54GO:0004629: phospholipase C activity1.94E-03
55GO:0005200: structural constituent of cytoskeleton2.12E-03
56GO:0003924: GTPase activity2.25E-03
57GO:0005261: cation channel activity2.32E-03
58GO:0004435: phosphatidylinositol phospholipase C activity2.32E-03
59GO:0051920: peroxiredoxin activity2.32E-03
60GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity2.32E-03
61GO:0004033: aldo-keto reductase (NADP) activity3.17E-03
62GO:0016209: antioxidant activity3.17E-03
63GO:0004034: aldose 1-epimerase activity3.17E-03
64GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)3.63E-03
65GO:0015174: basic amino acid transmembrane transporter activity4.60E-03
66GO:0008047: enzyme activator activity5.11E-03
67GO:0051537: 2 iron, 2 sulfur cluster binding5.44E-03
68GO:0047372: acylglycerol lipase activity5.65E-03
69GO:0015293: symporter activity5.66E-03
70GO:0016491: oxidoreductase activity6.99E-03
71GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups8.28E-03
72GO:0004407: histone deacetylase activity9.26E-03
73GO:0015035: protein disulfide oxidoreductase activity9.95E-03
74GO:0033612: receptor serine/threonine kinase binding1.06E-02
75GO:0005525: GTP binding1.14E-02
76GO:0030570: pectate lyase activity1.20E-02
77GO:0019843: rRNA binding1.21E-02
78GO:0004252: serine-type endopeptidase activity1.35E-02
79GO:0008536: Ran GTPase binding1.50E-02
80GO:0001085: RNA polymerase II transcription factor binding1.50E-02
81GO:0016853: isomerase activity1.58E-02
82GO:0016787: hydrolase activity1.62E-02
83GO:0051015: actin filament binding1.91E-02
84GO:0016597: amino acid binding2.18E-02
85GO:0102483: scopolin beta-glucosidase activity2.55E-02
86GO:0008236: serine-type peptidase activity2.64E-02
87GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity2.74E-02
88GO:0003682: chromatin binding2.75E-02
89GO:0043565: sequence-specific DNA binding2.75E-02
90GO:0005096: GTPase activator activity2.84E-02
91GO:0004222: metalloendopeptidase activity2.94E-02
92GO:0050660: flavin adenine dinucleotide binding3.00E-02
93GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding3.04E-02
94GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.11E-02
95GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.24E-02
96GO:0008422: beta-glucosidase activity3.45E-02
97GO:0004364: glutathione transferase activity3.78E-02
98GO:0004185: serine-type carboxypeptidase activity3.88E-02
99GO:0004871: signal transducer activity4.03E-02
100GO:0005198: structural molecule activity4.22E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast2.26E-21
2GO:0009570: chloroplast stroma1.65E-20
3GO:0009535: chloroplast thylakoid membrane5.07E-13
4GO:0009534: chloroplast thylakoid6.58E-09
5GO:0009543: chloroplast thylakoid lumen7.11E-08
6GO:0009941: chloroplast envelope1.02E-07
7GO:0009501: amyloplast2.14E-06
8GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)4.41E-06
9GO:0030095: chloroplast photosystem II2.03E-05
10GO:0031977: thylakoid lumen5.08E-05
11GO:0009579: thylakoid7.46E-05
12GO:0009533: chloroplast stromal thylakoid1.07E-04
13GO:0009344: nitrite reductase complex [NAD(P)H]1.77E-04
14GO:0010007: magnesium chelatase complex6.55E-04
15GO:0009654: photosystem II oxygen evolving complex7.64E-04
16GO:0015630: microtubule cytoskeleton9.34E-04
17GO:0019898: extrinsic component of membrane1.55E-03
18GO:0010319: stromule2.12E-03
19GO:0045298: tubulin complex4.10E-03
20GO:0048046: apoplast5.03E-03
21GO:0042651: thylakoid membrane9.92E-03
22GO:0015629: actin cytoskeleton1.20E-02
23GO:0009523: photosystem II1.66E-02
24GO:0009536: plastid2.12E-02
25GO:0009505: plant-type cell wall2.19E-02
26GO:0005667: transcription factor complex2.45E-02
27GO:0015934: large ribosomal subunit3.04E-02
28GO:0005874: microtubule3.11E-02
29GO:0005856: cytoskeleton4.22E-02
30GO:0031966: mitochondrial membrane4.56E-02
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Gene type



Gene DE type