Gene: AT1G08390
     


Gene description


TAIR ID: AT1G08390

No short description

Pathogen responsiveness: -0.62

General responsiveness: -1.65

Orthologous


Rice:

OS03G0684300  

Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


negative regulation of double-strand break repair via homologous recombination, maintenance of rDNA, DNA repair, pollen development


GO cellular component


nucleus


GO molecular function


unkown


Protein domain


PfamPF16100, RecQ-mediated genome instability protein 2

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G41315, AT5G61850

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


14 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.593.34E-05
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.953.01E-06
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-1.982.44E-09
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt2-1.501.38E-03
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt2-1.521.36E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.421.08E-14
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.731.43E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.459.30E-15
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.798.02E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.262.37E-14
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-1.772.31E-12
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-1.564.90E-11
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.554.86E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-1.532.83E-02






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